| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is cysQ [H]
Identifier: 114799459
GI number: 114799459
Start: 156619
End: 157407
Strand: Reverse
Name: cysQ [H]
Synonym: HNE_0169
Alternate gene names: 114799459
Gene position: 157407-156619 (Counterclockwise)
Preceding gene: 114797197
Following gene: 114800209
Centisome position: 4.25
GC content: 61.34
Gene sequence:
>789_bases ATGGCAGTCACCGCAGACATTCTCGCCGCTATCGCCCTTGCCGCCGGCAAGGAAATCATGCGCGTTTATCGCACGGACTT CAGCGTCAGCCACAAGGACGATCATTCCGTACTGACCGAAGCCGATGGCCTTGCCGAAGCAATCATACTGAAAGGCCTCG CCGAGGCGGAGCCCAGCCTCCAGGTCATCGCCGAAGAGGCGGTCGCGGGCGGACACATGCCCGAACACGGCGCCCGCTTC GCACTGGTTGACCCGCTGGACGGGACCAAGGAATTCGTCGCAAAGAATGGCGAGTTCACGGTGAATATTGCAATCATCGA ACATGGCCGTCCGGTCATGGGCGTCGTTTATGTTCCTGCCCAGAACCGTCTTTTTGTCGCCGAAGGCCCTGGCAAAGCCT GGCATGCAAATGCTGCACCCGACGGGCCGGTTCCCGGCGATCGCACGACGCTCAAGGTACGCCCTGCCCCGGCTGCCGGA CTAACCGCCGTTGCCTCCAAGTCGCACCGTAGTCCCGAGACGGATGAATGGCTGTCGCAGTATCCGGTTGCCGAAATCAA AGGGGCTGGCTCTGCCCTGAAATTCTGCCTCGTTGCAGCAGGTGAGGCAGACGTCTACCCCCGTCTCGGCCGCACCATGG AGTGGGATACTGCTGCTGGACAGGCCGTCGTGGAAGCTGCCGGGGGCCGCGTACTGACTATTTCCGGAGAGCCCCTCCTC TATGGCAAGCGGGACCGCGGATACGACAATCCCCACTTTGTCGTTTTTGGAGATGTGACGCCGCATTGA
Upstream 100 bases:
>100_bases TGGCGAAGAAGGCACTCCCGGCGGACCGATCCCTCCCAACACGGCACTGCAGTTCGAAGTTGAGCTGCTTGATGTAATGC GCTGAGCGAGGAGGGCTTCA
Downstream 100 bases:
>100_bases ATGGCCGGCGTCGGAGGAAAGACATGGCGCGCCAATATTTTGGAACGGACGGCATTCGCGGACGGGTGAATACAAGTCCG ATGACGGCAGAAACAGCGCT
Product: 3'(2'),5'-bisphosphate nucleotidase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MAVTADILAAIALAAGKEIMRVYRTDFSVSHKDDHSVLTEADGLAEAIILKGLAEAEPSLQVIAEEAVAGGHMPEHGARF ALVDPLDGTKEFVAKNGEFTVNIAIIEHGRPVMGVVYVPAQNRLFVAEGPGKAWHANAAPDGPVPGDRTTLKVRPAPAAG LTAVASKSHRSPETDEWLSQYPVAEIKGAGSALKFCLVAAGEADVYPRLGRTMEWDTAAGQAVVEAAGGRVLTISGEPLL YGKRDRGYDNPHFVVFGDVTPH
Sequences:
>Translated_262_residues MAVTADILAAIALAAGKEIMRVYRTDFSVSHKDDHSVLTEADGLAEAIILKGLAEAEPSLQVIAEEAVAGGHMPEHGARF ALVDPLDGTKEFVAKNGEFTVNIAIIEHGRPVMGVVYVPAQNRLFVAEGPGKAWHANAAPDGPVPGDRTTLKVRPAPAAG LTAVASKSHRSPETDEWLSQYPVAEIKGAGSALKFCLVAAGEADVYPRLGRTMEWDTAAGQAVVEAAGGRVLTISGEPLL YGKRDRGYDNPHFVVFGDVTPH >Mature_261_residues AVTADILAAIALAAGKEIMRVYRTDFSVSHKDDHSVLTEADGLAEAIILKGLAEAEPSLQVIAEEAVAGGHMPEHGARFA LVDPLDGTKEFVAKNGEFTVNIAIIEHGRPVMGVVYVPAQNRLFVAEGPGKAWHANAAPDGPVPGDRTTLKVRPAPAAGL TAVASKSHRSPETDEWLSQYPVAEIKGAGSALKFCLVAAGEADVYPRLGRTMEWDTAAGQAVVEAAGGRVLTISGEPLLY GKRDRGYDNPHFVVFGDVTPH
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI221625487, Length=256, Percent_Identity=27.34375, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI5031789, Length=250, Percent_Identity=27.6, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI7657236, Length=244, Percent_Identity=30.327868852459, Blast_Score=73, Evalue=3e-13, Organism=Escherichia coli, GI1790659, Length=252, Percent_Identity=44.047619047619, Blast_Score=169, Evalue=1e-43, Organism=Escherichia coli, GI1788882, Length=245, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193202570, Length=228, Percent_Identity=28.0701754385965, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193202572, Length=221, Percent_Identity=27.1493212669683, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71995905, Length=243, Percent_Identity=25.9259259259259, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71995897, Length=241, Percent_Identity=26.1410788381743, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6320493, Length=211, Percent_Identity=31.2796208530806, Blast_Score=73, Evalue=4e-14, Organism=Drosophila melanogaster, GI24664926, Length=215, Percent_Identity=26.9767441860465, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI21357303, Length=240, Percent_Identity=27.0833333333333, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24664922, Length=251, Percent_Identity=27.8884462151394, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 27636; Mature: 27504
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTADILAAIALAAGKEIMRVYRTDFSVSHKDDHSVLTEADGLAEAIILKGLAEAEPSL CCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCH QVIAEEAVAGGHMPEHGARFALVDPLDGTKEFVAKNGEFTVNIAIIEHGRPVMGVVYVPA HHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHCCCCEEEEEEEEECCCCEEEEEEECC QNRLFVAEGPGKAWHANAAPDGPVPGDRTTLKVRPAPAAGLTAVASKSHRSPETDEWLSQ CCEEEEEECCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCHHHHHHH YPVAEIKGAGSALKFCLVAAGEADVYPRLGRTMEWDTAAGQAVVEAAGGRVLTISGEPLL CCHHHHCCCCHHEEEEEEECCCCCCCHHCCCEEECCCCCCHHHEECCCCEEEEEECCEEE YGKRDRGYDNPHFVVFGDVTPH EECCCCCCCCCCEEEECCCCCC >Mature Secondary Structure AVTADILAAIALAAGKEIMRVYRTDFSVSHKDDHSVLTEADGLAEAIILKGLAEAEPSL CCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCH QVIAEEAVAGGHMPEHGARFALVDPLDGTKEFVAKNGEFTVNIAIIEHGRPVMGVVYVPA HHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHCCCCEEEEEEEEECCCCEEEEEEECC QNRLFVAEGPGKAWHANAAPDGPVPGDRTTLKVRPAPAAGLTAVASKSHRSPETDEWLSQ CCEEEEEECCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCHHHHHHH YPVAEIKGAGSALKFCLVAAGEADVYPRLGRTMEWDTAAGQAVVEAAGGRVLTISGEPLL CCHHHHCCCCHHEEEEEEECCCCCCCHHCCCEEECCCCCCHHHEECCCCEEEEEECCEEE YGKRDRGYDNPHFVVFGDVTPH EECCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]