| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799453
Identifier: 114799453
GI number: 114799453
Start: 2057188
End: 2058450
Strand: Direct
Name: 114799453
Synonym: HNE_1984
Alternate gene names: NA
Gene position: 2057188-2058450 (Clockwise)
Preceding gene: 114799737
Following gene: 114797135
Centisome position: 55.52
GC content: 65.64
Gene sequence:
>1263_bases ATGCTGGATTTTTCGTTTTACGATCCTCCCATCGAGGTGGCTGCATCCAGCCCCCGCCTCGAGATGATCGTATCGCGCCT CAAGGTGTCCGGCCTGCGCCCTTATACGGCTTCCGCCAGCATCGACTTCTCCGCGCCCGATCCGCTGATCGTGGACCGCG AATCCGTTTCGCCCGAAGCGCTGGAACGCCTCAGCCGCGCGGCGATGATCGGCGTGCCCCGCCAGATCGTTATCCTGAAC ACGCAAGGACTGCCCGTGCCGCGAATCGATGGCGCGATCCATCTGCGCCTCGATAAAGACCTCACCTCCCTGCGCAGCCG CCTGGCCGCGCTCGCCCGCCGCGCCTGCCGCCAGCGCGAGGCCGCCATCCGCCGCGCCACGGCGATCGAGCTGGGCGCCA AATTGCCCCCAGTCGATGTCGATGCCGTGCCCGCGCTGCTCTATCTTGGCGACGGCTCGCCCTTCTTCCTGTCGCTGCAG GGCGATCTGCGCCAGCGCGGCGTGGAGATTACGGCCGCCCTCTCCCGGCCCACCGCCCGCCAGCACATGACCAGCAAACG CTTTGCCGCCGCGCTGATCGATCTCAGCATGGCGCATGAAGATGCCAGCGGCATGGGCCGTTGGATTTCAGAGGAAGACG GCCTCGCTGGGCTGCCCCTGATTGTTCTCAGCCGTCCGCAGGCAGACTTTACCGAGCGCGAACTTGCGCTGCTCAGCCAC GCTACGGAAATCATCGACCCGGCCGCGGACGATGAAACCATCGTCACCGCGATAGAAACCCAATGCCGCCGCCTGCACGC CAGCGCGCCGATGATGCCCCTGCCCGGCCTGTCCGCGCTGGCGGTAACCGATCTTGTTTCCGGCCTCTTCACACGCGGTT TCTTTGAGGCGCATCTGCCGCGCCAGATGGAAATCGCCAGTGAGCAGGCCGAAGCGCTCTCCGTTCTCACGCTTCGTCTG GATGTCGAGTTTTCAAACTCCCGCCCCGCCCAGCACGCCGCAGGCGACATCATCCGCAGCCAGATCCGCGACACAGACTG CGCCGCGCTCGTCCAGCCGGGCGTCTATGCGATCTCCCTGCCCGCCACGCCCTATCGCGGCGGCGTGCGCCTTGCCGAAC GGATCAATGACGCCATGAGCCGGGCGGGCAACCATCCCGGCCTCAGCTGGCGCGTTACAGAGAAGCGCAGCTATCACACG CCACAGACATTCCTTGCCGCCTCCCTTATCGGACCATTCGTCCGGATACGGATTGCGGCTTAA
Upstream 100 bases:
>100_bases GGTCGAGTTAGCGGAACTTTAAGGGTGGCAGGCGCAAAAGGAAGGGGTGCCGCGACGTAGCTCCCGGCCCATTTTCACCG AGTTTCAGGCGCGTACCGGC
Downstream 100 bases:
>100_bases GGACCGGACCTCAATCCTCGCTCAGCAGGCCGCTTTTAATCGGCTTTGCCCATTTGTCTTCCGGCGCCGCCGCCTTGCGC GAGGGCATGCTGGCCACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MLDFSFYDPPIEVAASSPRLEMIVSRLKVSGLRPYTASASIDFSAPDPLIVDRESVSPEALERLSRAAMIGVPRQIVILN TQGLPVPRIDGAIHLRLDKDLTSLRSRLAALARRACRQREAAIRRATAIELGAKLPPVDVDAVPALLYLGDGSPFFLSLQ GDLRQRGVEITAALSRPTARQHMTSKRFAAALIDLSMAHEDASGMGRWISEEDGLAGLPLIVLSRPQADFTERELALLSH ATEIIDPAADDETIVTAIETQCRRLHASAPMMPLPGLSALAVTDLVSGLFTRGFFEAHLPRQMEIASEQAEALSVLTLRL DVEFSNSRPAQHAAGDIIRSQIRDTDCAALVQPGVYAISLPATPYRGGVRLAERINDAMSRAGNHPGLSWRVTEKRSYHT PQTFLAASLIGPFVRIRIAA
Sequences:
>Translated_420_residues MLDFSFYDPPIEVAASSPRLEMIVSRLKVSGLRPYTASASIDFSAPDPLIVDRESVSPEALERLSRAAMIGVPRQIVILN TQGLPVPRIDGAIHLRLDKDLTSLRSRLAALARRACRQREAAIRRATAIELGAKLPPVDVDAVPALLYLGDGSPFFLSLQ GDLRQRGVEITAALSRPTARQHMTSKRFAAALIDLSMAHEDASGMGRWISEEDGLAGLPLIVLSRPQADFTERELALLSH ATEIIDPAADDETIVTAIETQCRRLHASAPMMPLPGLSALAVTDLVSGLFTRGFFEAHLPRQMEIASEQAEALSVLTLRL DVEFSNSRPAQHAAGDIIRSQIRDTDCAALVQPGVYAISLPATPYRGGVRLAERINDAMSRAGNHPGLSWRVTEKRSYHT PQTFLAASLIGPFVRIRIAA >Mature_420_residues MLDFSFYDPPIEVAASSPRLEMIVSRLKVSGLRPYTASASIDFSAPDPLIVDRESVSPEALERLSRAAMIGVPRQIVILN TQGLPVPRIDGAIHLRLDKDLTSLRSRLAALARRACRQREAAIRRATAIELGAKLPPVDVDAVPALLYLGDGSPFFLSLQ GDLRQRGVEITAALSRPTARQHMTSKRFAAALIDLSMAHEDASGMGRWISEEDGLAGLPLIVLSRPQADFTERELALLSH ATEIIDPAADDETIVTAIETQCRRLHASAPMMPLPGLSALAVTDLVSGLFTRGFFEAHLPRQMEIASEQAEALSVLTLRL DVEFSNSRPAQHAAGDIIRSQIRDTDCAALVQPGVYAISLPATPYRGGVRLAERINDAMSRAGNHPGLSWRVTEKRSYHT PQTFLAASLIGPFVRIRIAA
Specific function: Unknown
COG id: COG3706
COG function: function code T; Response regulator containing a CheY-like receiver domain and a GGDEF domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45637; Mature: 45637
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDFSFYDPPIEVAASSPRLEMIVSRLKVSGLRPYTASASIDFSAPDPLIVDRESVSPEA CCCCCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECCCCCHHH LERLSRAAMIGVPRQIVILNTQGLPVPRIDGAIHLRLDKDLTSLRSRLAALARRACRQRE HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHH AAIRRATAIELGAKLPPVDVDAVPALLYLGDGSPFFLSLQGDLRQRGVEITAALSRPTAR HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHCCEEEEEECCCCHHH QHMTSKRFAAALIDLSMAHEDASGMGRWISEEDGLAGLPLIVLSRPQADFTERELALLSH HHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH ATEIIDPAADDETIVTAIETQCRRLHASAPMMPLPGLSALAVTDLVSGLFTRGFFEAHLP HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC RQMEIASEQAEALSVLTLRLDVEFSNSRPAQHAAGDIIRSQIRDTDCAALVQPGVYAISL CHHHHHHHHHHHEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEC PATPYRGGVRLAERINDAMSRAGNHPGLSWRVTEKRSYHTPQTFLAASLIGPFVRIRIAA CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEEECC >Mature Secondary Structure MLDFSFYDPPIEVAASSPRLEMIVSRLKVSGLRPYTASASIDFSAPDPLIVDRESVSPEA CCCCCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECCCCCHHH LERLSRAAMIGVPRQIVILNTQGLPVPRIDGAIHLRLDKDLTSLRSRLAALARRACRQRE HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHH AAIRRATAIELGAKLPPVDVDAVPALLYLGDGSPFFLSLQGDLRQRGVEITAALSRPTAR HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHCCEEEEEECCCCHHH QHMTSKRFAAALIDLSMAHEDASGMGRWISEEDGLAGLPLIVLSRPQADFTERELALLSH HHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH ATEIIDPAADDETIVTAIETQCRRLHASAPMMPLPGLSALAVTDLVSGLFTRGFFEAHLP HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC RQMEIASEQAEALSVLTLRLDVEFSNSRPAQHAAGDIIRSQIRDTDCAALVQPGVYAISL CHHHHHHHHHHHEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEC PATPYRGGVRLAERINDAMSRAGNHPGLSWRVTEKRSYHTPQTFLAASLIGPFVRIRIAA CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA