Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114799453

Identifier: 114799453

GI number: 114799453

Start: 2057188

End: 2058450

Strand: Direct

Name: 114799453

Synonym: HNE_1984

Alternate gene names: NA

Gene position: 2057188-2058450 (Clockwise)

Preceding gene: 114799737

Following gene: 114797135

Centisome position: 55.52

GC content: 65.64

Gene sequence:

>1263_bases
ATGCTGGATTTTTCGTTTTACGATCCTCCCATCGAGGTGGCTGCATCCAGCCCCCGCCTCGAGATGATCGTATCGCGCCT
CAAGGTGTCCGGCCTGCGCCCTTATACGGCTTCCGCCAGCATCGACTTCTCCGCGCCCGATCCGCTGATCGTGGACCGCG
AATCCGTTTCGCCCGAAGCGCTGGAACGCCTCAGCCGCGCGGCGATGATCGGCGTGCCCCGCCAGATCGTTATCCTGAAC
ACGCAAGGACTGCCCGTGCCGCGAATCGATGGCGCGATCCATCTGCGCCTCGATAAAGACCTCACCTCCCTGCGCAGCCG
CCTGGCCGCGCTCGCCCGCCGCGCCTGCCGCCAGCGCGAGGCCGCCATCCGCCGCGCCACGGCGATCGAGCTGGGCGCCA
AATTGCCCCCAGTCGATGTCGATGCCGTGCCCGCGCTGCTCTATCTTGGCGACGGCTCGCCCTTCTTCCTGTCGCTGCAG
GGCGATCTGCGCCAGCGCGGCGTGGAGATTACGGCCGCCCTCTCCCGGCCCACCGCCCGCCAGCACATGACCAGCAAACG
CTTTGCCGCCGCGCTGATCGATCTCAGCATGGCGCATGAAGATGCCAGCGGCATGGGCCGTTGGATTTCAGAGGAAGACG
GCCTCGCTGGGCTGCCCCTGATTGTTCTCAGCCGTCCGCAGGCAGACTTTACCGAGCGCGAACTTGCGCTGCTCAGCCAC
GCTACGGAAATCATCGACCCGGCCGCGGACGATGAAACCATCGTCACCGCGATAGAAACCCAATGCCGCCGCCTGCACGC
CAGCGCGCCGATGATGCCCCTGCCCGGCCTGTCCGCGCTGGCGGTAACCGATCTTGTTTCCGGCCTCTTCACACGCGGTT
TCTTTGAGGCGCATCTGCCGCGCCAGATGGAAATCGCCAGTGAGCAGGCCGAAGCGCTCTCCGTTCTCACGCTTCGTCTG
GATGTCGAGTTTTCAAACTCCCGCCCCGCCCAGCACGCCGCAGGCGACATCATCCGCAGCCAGATCCGCGACACAGACTG
CGCCGCGCTCGTCCAGCCGGGCGTCTATGCGATCTCCCTGCCCGCCACGCCCTATCGCGGCGGCGTGCGCCTTGCCGAAC
GGATCAATGACGCCATGAGCCGGGCGGGCAACCATCCCGGCCTCAGCTGGCGCGTTACAGAGAAGCGCAGCTATCACACG
CCACAGACATTCCTTGCCGCCTCCCTTATCGGACCATTCGTCCGGATACGGATTGCGGCTTAA

Upstream 100 bases:

>100_bases
GGTCGAGTTAGCGGAACTTTAAGGGTGGCAGGCGCAAAAGGAAGGGGTGCCGCGACGTAGCTCCCGGCCCATTTTCACCG
AGTTTCAGGCGCGTACCGGC

Downstream 100 bases:

>100_bases
GGACCGGACCTCAATCCTCGCTCAGCAGGCCGCTTTTAATCGGCTTTGCCCATTTGTCTTCCGGCGCCGCCGCCTTGCGC
GAGGGCATGCTGGCCACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MLDFSFYDPPIEVAASSPRLEMIVSRLKVSGLRPYTASASIDFSAPDPLIVDRESVSPEALERLSRAAMIGVPRQIVILN
TQGLPVPRIDGAIHLRLDKDLTSLRSRLAALARRACRQREAAIRRATAIELGAKLPPVDVDAVPALLYLGDGSPFFLSLQ
GDLRQRGVEITAALSRPTARQHMTSKRFAAALIDLSMAHEDASGMGRWISEEDGLAGLPLIVLSRPQADFTERELALLSH
ATEIIDPAADDETIVTAIETQCRRLHASAPMMPLPGLSALAVTDLVSGLFTRGFFEAHLPRQMEIASEQAEALSVLTLRL
DVEFSNSRPAQHAAGDIIRSQIRDTDCAALVQPGVYAISLPATPYRGGVRLAERINDAMSRAGNHPGLSWRVTEKRSYHT
PQTFLAASLIGPFVRIRIAA

Sequences:

>Translated_420_residues
MLDFSFYDPPIEVAASSPRLEMIVSRLKVSGLRPYTASASIDFSAPDPLIVDRESVSPEALERLSRAAMIGVPRQIVILN
TQGLPVPRIDGAIHLRLDKDLTSLRSRLAALARRACRQREAAIRRATAIELGAKLPPVDVDAVPALLYLGDGSPFFLSLQ
GDLRQRGVEITAALSRPTARQHMTSKRFAAALIDLSMAHEDASGMGRWISEEDGLAGLPLIVLSRPQADFTERELALLSH
ATEIIDPAADDETIVTAIETQCRRLHASAPMMPLPGLSALAVTDLVSGLFTRGFFEAHLPRQMEIASEQAEALSVLTLRL
DVEFSNSRPAQHAAGDIIRSQIRDTDCAALVQPGVYAISLPATPYRGGVRLAERINDAMSRAGNHPGLSWRVTEKRSYHT
PQTFLAASLIGPFVRIRIAA
>Mature_420_residues
MLDFSFYDPPIEVAASSPRLEMIVSRLKVSGLRPYTASASIDFSAPDPLIVDRESVSPEALERLSRAAMIGVPRQIVILN
TQGLPVPRIDGAIHLRLDKDLTSLRSRLAALARRACRQREAAIRRATAIELGAKLPPVDVDAVPALLYLGDGSPFFLSLQ
GDLRQRGVEITAALSRPTARQHMTSKRFAAALIDLSMAHEDASGMGRWISEEDGLAGLPLIVLSRPQADFTERELALLSH
ATEIIDPAADDETIVTAIETQCRRLHASAPMMPLPGLSALAVTDLVSGLFTRGFFEAHLPRQMEIASEQAEALSVLTLRL
DVEFSNSRPAQHAAGDIIRSQIRDTDCAALVQPGVYAISLPATPYRGGVRLAERINDAMSRAGNHPGLSWRVTEKRSYHT
PQTFLAASLIGPFVRIRIAA

Specific function: Unknown

COG id: COG3706

COG function: function code T; Response regulator containing a CheY-like receiver domain and a GGDEF domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45637; Mature: 45637

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDFSFYDPPIEVAASSPRLEMIVSRLKVSGLRPYTASASIDFSAPDPLIVDRESVSPEA
CCCCCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECCCCCHHH
LERLSRAAMIGVPRQIVILNTQGLPVPRIDGAIHLRLDKDLTSLRSRLAALARRACRQRE
HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHH
AAIRRATAIELGAKLPPVDVDAVPALLYLGDGSPFFLSLQGDLRQRGVEITAALSRPTAR
HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHCCEEEEEECCCCHHH
QHMTSKRFAAALIDLSMAHEDASGMGRWISEEDGLAGLPLIVLSRPQADFTERELALLSH
HHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH
ATEIIDPAADDETIVTAIETQCRRLHASAPMMPLPGLSALAVTDLVSGLFTRGFFEAHLP
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
RQMEIASEQAEALSVLTLRLDVEFSNSRPAQHAAGDIIRSQIRDTDCAALVQPGVYAISL
CHHHHHHHHHHHEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEC
PATPYRGGVRLAERINDAMSRAGNHPGLSWRVTEKRSYHTPQTFLAASLIGPFVRIRIAA
CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure
MLDFSFYDPPIEVAASSPRLEMIVSRLKVSGLRPYTASASIDFSAPDPLIVDRESVSPEA
CCCCCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECCCCCHHH
LERLSRAAMIGVPRQIVILNTQGLPVPRIDGAIHLRLDKDLTSLRSRLAALARRACRQRE
HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHH
AAIRRATAIELGAKLPPVDVDAVPALLYLGDGSPFFLSLQGDLRQRGVEITAALSRPTAR
HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHCCEEEEEECCCCHHH
QHMTSKRFAAALIDLSMAHEDASGMGRWISEEDGLAGLPLIVLSRPQADFTERELALLSH
HHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH
ATEIIDPAADDETIVTAIETQCRRLHASAPMMPLPGLSALAVTDLVSGLFTRGFFEAHLP
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
RQMEIASEQAEALSVLTLRLDVEFSNSRPAQHAAGDIIRSQIRDTDCAALVQPGVYAISL
CHHHHHHHHHHHEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEC
PATPYRGGVRLAERINDAMSRAGNHPGLSWRVTEKRSYHTPQTFLAASLIGPFVRIRIAA
CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA