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The map label for this gene is ccmH [H]

Identifier: 114799452

GI number: 114799452

Start: 1347886

End: 1348284

Strand: Reverse

Name: ccmH [H]

Synonym: HNE_1314

Alternate gene names: 114799452

Gene position: 1348284-1347886 (Counterclockwise)

Preceding gene: 114800208

Following gene: 114798730

Centisome position: 36.39

GC content: 66.67

Gene sequence:

>399_bases
ATGAAAGCGCTTCTCGCCACCCTCCTCATCGCCTTTGCCGCCGGCGCCCCTCTGGACGATCCGGATGCAGAGCTGCGCGC
CCAGGCTCTGATGCGGGAAGTGCGCTGCGTCGCCTGCGAGAACGAGCCGGTGTCGCAATCGTCCGCCCCGATTGCCGAAG
ATATGCGCACCCGCATCCGCGAGATGGTGGCCGAGGGCGCCACCGATACCGAGATCCGGGACTGGTTCGTCAGCCGCTAT
GGGGAATTCGTGCTGTTCCGTCCCCCGGCGCGCGACCCCGCCAGCTGGCTGCTCTGGACGCTGCCCTTCATCCTGCTGGG
CGCGGGCGCGGGCATAGGCATCGTGCTCGCCAGAAACGCGAAGCGCAAAAACGGCGAAGTTGAAGCTGAAGACGCCTGA

Upstream 100 bases:

>100_bases
CCCGCGAATCAGAAGAAGCCGTCATGCGGCGTGACGGGGTAATCTGAGACATCGCAGCGCCTTTCCCCTCTGCGTCCCGC
TCTGCTAGGGTCACCGCACT

Downstream 100 bases:

>100_bases
CCGGGGCGTCACGGCGGGTCAATTTATGCCCAGGGTGGCCTTCAAGCTGCCGTGATTACACCTAACTGTCTTTTAATGCC
CACTCTGGCTGTGGCATGTT

Product: putative cytochrome c-type biogenesis protein CycL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MKALLATLLIAFAAGAPLDDPDAELRAQALMREVRCVACENEPVSQSSAPIAEDMRTRIREMVAEGATDTEIRDWFVSRY
GEFVLFRPPARDPASWLLWTLPFILLGAGAGIGIVLARNAKRKNGEVEAEDA

Sequences:

>Translated_132_residues
MKALLATLLIAFAAGAPLDDPDAELRAQALMREVRCVACENEPVSQSSAPIAEDMRTRIREMVAEGATDTEIRDWFVSRY
GEFVLFRPPARDPASWLLWTLPFILLGAGAGIGIVLARNAKRKNGEVEAEDA
>Mature_132_residues
MKALLATLLIAFAAGAPLDDPDAELRAQALMREVRCVACENEPVSQSSAPIAEDMRTRIREMVAEGATDTEIRDWFVSRY
GEFVLFRPPARDPASWLLWTLPFILLGAGAGIGIVLARNAKRKNGEVEAEDA

Specific function: May be required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788522, Length=117, Percent_Identity=34.1880341880342, Blast_Score=81, Evalue=2e-17,
Organism=Escherichia coli, GI1790512, Length=70, Percent_Identity=38.5714285714286, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 14442; Mature: 14442

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALLATLLIAFAAGAPLDDPDAELRAQALMREVRCVACENEPVSQSSAPIAEDMRTRIR
CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
EMVAEGATDTEIRDWFVSRYGEFVLFRPPARDPASWLLWTLPFILLGAGAGIGIVLARNA
HHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC
KRKNGEVEAEDA
CCCCCCCCCCCC
>Mature Secondary Structure
MKALLATLLIAFAAGAPLDDPDAELRAQALMREVRCVACENEPVSQSSAPIAEDMRTRIR
CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
EMVAEGATDTEIRDWFVSRYGEFVLFRPPARDPASWLLWTLPFILLGAGAGIGIVLARNA
HHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC
KRKNGEVEAEDA
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 7635817 [H]