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The map label for this gene is psaB [H]

Identifier: 114799403

GI number: 114799403

Start: 950290

End: 951138

Strand: Direct

Name: psaB [H]

Synonym: HNE_0935

Alternate gene names: 114799403

Gene position: 950290-951138 (Clockwise)

Preceding gene: 114798392

Following gene: 114800519

Centisome position: 25.65

GC content: 64.66

Gene sequence:

>849_bases
ATGGCTATCCGTTCCTGCCTGTCCCTATCTGTCGCCGTTCTGGCCCTTGCCGCCTGTGGCGGAGAGGCGCCGCCGGAGGT
CCGGCCCTCCGTCCAGGCGCAGACCGTAAGCAGTGAAGAATGTGTGCCGATTGCGGACGGCATGTATGAAATGCGGGACG
GCCGCCTGCTGGCGACATCCCTGCCGCCGGAACTTGCCGCCAGCAATCCCGCCCTCTGGGCACAAGAAATCAAGGCAGGC
CTTCAGGGCGCCGGGATCGGCTGGCTGGGTGTGGTGATCCGGGATCAGGTAGCCGTCGTGACGGGAACCGCGCCGGACGC
TGAGGCGAAAGCGCAGGGTTTCTCCACGGGCCGGGCCGCCATTGAAGGCCACCCGCGCGCGGGCGAGGCAAACCTGATCA
TCGTGGACGGGATTTCGATTGAGGGCGGCGAAGAAGGTATCGGCGTTCCGCTTGCCAATCTGACCGGCCAATTGACCACG
ATCGAGAGCTGCCAGGCGGCGTTTGATGTCACCTCGAAGGACCGTGTCATCCAGTTCGGCGCCGGCAATGCCAATATTTC
ACCGGTCAGCCTGCCGCTGATCGATGCGTTGGGCGGCATTGCAGCCCTCTGCCGCGCCTTTGAAATCGAGATCGGCGCGC
ACACCGACACGCGCGGCGCCGACGACTATAATCAACGCGTCTCCCAGGAACGCGCTGATGCGATCCGTGCCTATCTCCTC
GGCAAAGAGCTTGCCGAGGAAACGCTGACGGCTGTGGGCTATGGCGAAACCCAGCCCATCGACACCGGGTCGACGGCTGA
GGCGCATGCCCGCAACCGCCGCACCGTGTTCACGGTTAAGCAGCGCTGA

Upstream 100 bases:

>100_bases
GCCTGTCGCTTTGACGGCGGAGGCTGCGCCGCTTATGCAATTCAAGTTGGTAAATCCCGCCCGCCGGGCCGCGCCACCGT
GAGCCCCTATGAGGAAAGTC

Downstream 100 bases:

>100_bases
AGCTCAGAAGCTGAGGATCAGCCCTTTTGAGGGCGGGATCTTCGCGTCGAGCGTTTGTTGCCAGGCGGTCTTGATGGCGT
CCTGACCGCTCTGTTTGAGG

Product: OmpA family protein

Products: NA

Alternate protein names: PsaB [H]

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MAIRSCLSLSVAVLALAACGGEAPPEVRPSVQAQTVSSEECVPIADGMYEMRDGRLLATSLPPELAASNPALWAQEIKAG
LQGAGIGWLGVVIRDQVAVVTGTAPDAEAKAQGFSTGRAAIEGHPRAGEANLIIVDGISIEGGEEGIGVPLANLTGQLTT
IESCQAAFDVTSKDRVIQFGAGNANISPVSLPLIDALGGIAALCRAFEIEIGAHTDTRGADDYNQRVSQERADAIRAYLL
GKELAEETLTAVGYGETQPIDTGSTAEAHARNRRTVFTVKQR

Sequences:

>Translated_282_residues
MAIRSCLSLSVAVLALAACGGEAPPEVRPSVQAQTVSSEECVPIADGMYEMRDGRLLATSLPPELAASNPALWAQEIKAG
LQGAGIGWLGVVIRDQVAVVTGTAPDAEAKAQGFSTGRAAIEGHPRAGEANLIIVDGISIEGGEEGIGVPLANLTGQLTT
IESCQAAFDVTSKDRVIQFGAGNANISPVSLPLIDALGGIAALCRAFEIEIGAHTDTRGADDYNQRVSQERADAIRAYLL
GKELAEETLTAVGYGETQPIDTGSTAEAHARNRRTVFTVKQR
>Mature_281_residues
AIRSCLSLSVAVLALAACGGEAPPEVRPSVQAQTVSSEECVPIADGMYEMRDGRLLATSLPPELAASNPALWAQEIKAGL
QGAGIGWLGVVIRDQVAVVTGTAPDAEAKAQGFSTGRAAIEGHPRAGEANLIIVDGISIEGGEEGIGVPLANLTGQLTTI
ESCQAAFDVTSKDRVIQFGAGNANISPVSLPLIDALGGIAALCRAFEIEIGAHTDTRGADDYNQRVSQERADAIRAYLLG
KELAEETLTAVGYGETQPIDTGSTAEAHARNRRTVFTVKQR

Specific function: PsaA and psaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which tran

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006665
- InterPro:   IPR001280
- InterPro:   IPR020586
- InterPro:   IPR006244 [H]

Pfam domain/function: PF00691 OmpA; PF00223 PsaA_PsaB [H]

EC number: NA

Molecular weight: Translated: 29289; Mature: 29158

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRSCLSLSVAVLALAACGGEAPPEVRPSVQAQTVSSEECVPIADGMYEMRDGRLLATS
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEECCCCHHHHCCCEEEEEC
LPPELAASNPALWAQEIKAGLQGAGIGWLGVVIRDQVAVVTGTAPDAEAKAQGFSTGRAA
CCHHHHCCCCHHHHHHHHHCCCCCCCHHEEHEEECCEEEEECCCCCCHHHHCCCCCCCCE
IEGHPRAGEANLIIVDGISIEGGEEGIGVPLANLTGQLTTIESCQAAFDVTSKDRVIQFG
ECCCCCCCCCCEEEEECEEECCCCCCCCCCHHHCCCCEEEHHHHHHHHCCCCCCCEEEEE
AGNANISPVSLPLIDALGGIAALCRAFEIEIGAHTDTRGADDYNQRVSQERADAIRAYLL
CCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GKELAEETLTAVGYGETQPIDTGSTAEAHARNRRTVFTVKQR
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCEEEEEECC
>Mature Secondary Structure 
AIRSCLSLSVAVLALAACGGEAPPEVRPSVQAQTVSSEECVPIADGMYEMRDGRLLATS
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEECCCCHHHHCCCEEEEEC
LPPELAASNPALWAQEIKAGLQGAGIGWLGVVIRDQVAVVTGTAPDAEAKAQGFSTGRAA
CCHHHHCCCCHHHHHHHHHCCCCCCCHHEEHEEECCEEEEECCCCCCHHHHCCCCCCCCE
IEGHPRAGEANLIIVDGISIEGGEEGIGVPLANLTGQLTTIESCQAAFDVTSKDRVIQFG
ECCCCCCCCCCEEEEECEEECCCCCCCCCCHHHCCCCEEEHHHHHHHHCCCCCCCEEEEE
AGNANISPVSLPLIDALGGIAALCRAFEIEIGAHTDTRGADDYNQRVSQERADAIRAYLL
CCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GKELAEETLTAVGYGETQPIDTGSTAEAHARNRRTVFTVKQR
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]