| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798392
Identifier: 114798392
GI number: 114798392
Start: 948889
End: 950166
Strand: Direct
Name: 114798392
Synonym: HNE_0934
Alternate gene names: NA
Gene position: 948889-950166 (Clockwise)
Preceding gene: 114797427
Following gene: 114799403
Centisome position: 25.61
GC content: 60.17
Gene sequence:
>1278_bases ATGAAAAAACTCACTGCCGCTGCCATTTGCGCGATGCTGCTTTCCGCGCCCGCCATGGCTGAAGATGCAATCATCCATGC TGGCTATGTTCTGGCCAAGCCGGGCGAAGGCTATCTCACCCGTCAGACAATCCTCGTGGAGGATGGCCGGGTTGTTTCAG TCACGTCTGGCTACTCAACGCCGAAAGACTATGCGGTGATCAATCTGCGTGACGCATATGTTCTGCCCGGCCTGATCGAC AGCCATGTGCACATTACCGGCGAGAATGGCCCGGAAGGCCGTATCAAGGAATTTGAGAACTCGGATGTCGATACAGCGTT TGATGGCGCTGCGTTTGCGTTGACCACGCTGGAGGCAGGCTTCACGACCGTTCAGGATGTCGGGGCGCCCAATGATTCCA TCTTCGGGCTGCGGGATGCCATCGCGCGGGGGGCTGTGCCGGGCCCGCGTCTGCGCGCATCGGGCGGTAGTGTGGCCGTT ACGGGCGGGCATGGTGATATAAACGGCTATTCGGCCCGCGTGATGGCAGAATTCACGGGCGCCAATATCTGCAACGGGGC GGACGATTGCCGCCGGGCTGTGCGTCAACAGATCAAGGAAGGCGCCGATCTGATCAAGATCACGGCAACAGGCGGCGTAC TTTCCAATACGTCCGCGGGCCTGGAACAACAGTTCACGGAAGAAGAACTCGAAGCTATCGTAGATGCCGCGCACTCGATG GGCAGGAAGGTTACTGCCCACGCGCATGGCAAGAGCGGTGTGGACGCCGCCCTTCGCGCCGGTATCGACTCGATCGAGCA CGGCACCTATCTCGACGGGGAGTCGATTGCCCTGTTCAAGGAAAATGGTGCAACGCTGGTGCCGACGGTTCTCGCCGGCG CGACTGTAACCGGATGGACCAATGAACCCTGGCTGCCGGCTGCCTCGCGAGCGAAGGCTGCGCAGGTTGGCCCGCTGATG CTTGAAATGCTTCGCCGGGCGCATGAGGGCGGGGTCACTGTAGCGTTCGGGACCGACACCGGCGTCTCCCGCCATGGTGA CAATGCCAAGGAATTTGCCTTGATGGTCGAGGCCGGATTCACGCCGGAAGAAGCAATCCGTTCGGCCACGGTGGTGGCGT CAGAACATCTGGAAATGTCGCAGGATATAGGCACTCTGGAGGCTGGCAAATATGCCGACCTTATCGCGGTGACGGCCGAT CCTCTCAAGGACATCCGGGCGCTTGAGGCAGTCAGCTTTGTCATGAAGGGCGGAGAGGTCTACAAGTCCGGCAAGTAA
Upstream 100 bases:
>100_bases ATCTGCCCTGCCGCCATTTGATGGCGGTTCCTTGCTCTAAATTGTTGAACAGATGGCAGGAAACGCTACCGTACTGGCTT GTTCCGGGGAGGTTATACCT
Downstream 100 bases:
>100_bases TTTGCAGGGGCAGGGGAGGCGCGGCCTGTCGCTTTGACGGCGGAGGCTGCGCCGCTTATGCAATTCAAGTTGGTAAATCC CGCCCGCCGGGCCGCGCCAC
Product: amidohydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MKKLTAAAICAMLLSAPAMAEDAIIHAGYVLAKPGEGYLTRQTILVEDGRVVSVTSGYSTPKDYAVINLRDAYVLPGLID SHVHITGENGPEGRIKEFENSDVDTAFDGAAFALTTLEAGFTTVQDVGAPNDSIFGLRDAIARGAVPGPRLRASGGSVAV TGGHGDINGYSARVMAEFTGANICNGADDCRRAVRQQIKEGADLIKITATGGVLSNTSAGLEQQFTEEELEAIVDAAHSM GRKVTAHAHGKSGVDAALRAGIDSIEHGTYLDGESIALFKENGATLVPTVLAGATVTGWTNEPWLPAASRAKAAQVGPLM LEMLRRAHEGGVTVAFGTDTGVSRHGDNAKEFALMVEAGFTPEEAIRSATVVASEHLEMSQDIGTLEAGKYADLIAVTAD PLKDIRALEAVSFVMKGGEVYKSGK
Sequences:
>Translated_425_residues MKKLTAAAICAMLLSAPAMAEDAIIHAGYVLAKPGEGYLTRQTILVEDGRVVSVTSGYSTPKDYAVINLRDAYVLPGLID SHVHITGENGPEGRIKEFENSDVDTAFDGAAFALTTLEAGFTTVQDVGAPNDSIFGLRDAIARGAVPGPRLRASGGSVAV TGGHGDINGYSARVMAEFTGANICNGADDCRRAVRQQIKEGADLIKITATGGVLSNTSAGLEQQFTEEELEAIVDAAHSM GRKVTAHAHGKSGVDAALRAGIDSIEHGTYLDGESIALFKENGATLVPTVLAGATVTGWTNEPWLPAASRAKAAQVGPLM LEMLRRAHEGGVTVAFGTDTGVSRHGDNAKEFALMVEAGFTPEEAIRSATVVASEHLEMSQDIGTLEAGKYADLIAVTAD PLKDIRALEAVSFVMKGGEVYKSGK >Mature_425_residues MKKLTAAAICAMLLSAPAMAEDAIIHAGYVLAKPGEGYLTRQTILVEDGRVVSVTSGYSTPKDYAVINLRDAYVLPGLID SHVHITGENGPEGRIKEFENSDVDTAFDGAAFALTTLEAGFTTVQDVGAPNDSIFGLRDAIARGAVPGPRLRASGGSVAV TGGHGDINGYSARVMAEFTGANICNGADDCRRAVRQQIKEGADLIKITATGGVLSNTSAGLEQQFTEEELEAIVDAAHSM GRKVTAHAHGKSGVDAALRAGIDSIEHGTYLDGESIALFKENGATLVPTVLAGATVTGWTNEPWLPAASRAKAAQVGPLM LEMLRRAHEGGVTVAFGTDTGVSRHGDNAKEFALMVEAGFTPEEAIRSATVVASEHLEMSQDIGTLEAGKYADLIAVTAD PLKDIRALEAVSFVMKGGEVYKSGK
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.coelicolor SCO1861 [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322248, Length=322, Percent_Identity=31.6770186335404, Blast_Score=150, Evalue=3e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: NA
Molecular weight: Translated: 44325; Mature: 44325
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLTAAAICAMLLSAPAMAEDAIIHAGYVLAKPGEGYLTRQTILVEDGRVVSVTSGYST CCCHHHHHHHHHHHCCCCHHHCCEEECCEEEECCCCCCEEEEEEEEECCEEEEEECCCCC PKDYAVINLRDAYVLPGLIDSHVHITGENGPEGRIKEFENSDVDTAFDGAAFALTTLEAG CCCEEEEEECCCEECCCEECCEEEEECCCCCCCCHHCCCCCCCCCCCCCCEEEEEEHHCC FTTVQDVGAPNDSIFGLRDAIARGAVPGPRLRASGGSVAVTGGHGDINGYSARVMAEFTG CHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCEEEECCCCCCCCCEEEEEEEECC ANICNGADDCRRAVRQQIKEGADLIKITATGGVLSNTSAGLEQQFTEEELEAIVDAAHSM CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHC GRKVTAHAHGKSGVDAALRAGIDSIEHGTYLDGESIALFKENGATLVPTVLAGATVTGWT CCEEEEECCCCCCHHHHHHHCCHHCCCCCEECCCEEEEEECCCCEEEHHHHCCCEEECCC NEPWLPAASRAKAAQVGPLMLEMLRRAHEGGVTVAFGTDTGVSRHGDNAKEFALMVEAGF CCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHEEEEEECCC TPEEAIRSATVVASEHLEMSQDIGTLEAGKYADLIAVTADPLKDIRALEAVSFVMKGGEV CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCE YKSGK ECCCC >Mature Secondary Structure MKKLTAAAICAMLLSAPAMAEDAIIHAGYVLAKPGEGYLTRQTILVEDGRVVSVTSGYST CCCHHHHHHHHHHHCCCCHHHCCEEECCEEEECCCCCCEEEEEEEEECCEEEEEECCCCC PKDYAVINLRDAYVLPGLIDSHVHITGENGPEGRIKEFENSDVDTAFDGAAFALTTLEAG CCCEEEEEECCCEECCCEECCEEEEECCCCCCCCHHCCCCCCCCCCCCCCEEEEEEHHCC FTTVQDVGAPNDSIFGLRDAIARGAVPGPRLRASGGSVAVTGGHGDINGYSARVMAEFTG CHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCEEEECCCCCCCCCEEEEEEEECC ANICNGADDCRRAVRQQIKEGADLIKITATGGVLSNTSAGLEQQFTEEELEAIVDAAHSM CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHC GRKVTAHAHGKSGVDAALRAGIDSIEHGTYLDGESIALFKENGATLVPTVLAGATVTGWT CCEEEEECCCCCCHHHHHHHCCHHCCCCCEECCCEEEEEECCCCEEEHHHHCCCEEECCC NEPWLPAASRAKAAQVGPLMLEMLRRAHEGGVTVAFGTDTGVSRHGDNAKEFALMVEAGF CCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHEEEEEECCC TPEEAIRSATVVASEHLEMSQDIGTLEAGKYADLIAVTADPLKDIRALEAVSFVMKGGEV CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCE YKSGK ECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]