Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114798392

Identifier: 114798392

GI number: 114798392

Start: 948889

End: 950166

Strand: Direct

Name: 114798392

Synonym: HNE_0934

Alternate gene names: NA

Gene position: 948889-950166 (Clockwise)

Preceding gene: 114797427

Following gene: 114799403

Centisome position: 25.61

GC content: 60.17

Gene sequence:

>1278_bases
ATGAAAAAACTCACTGCCGCTGCCATTTGCGCGATGCTGCTTTCCGCGCCCGCCATGGCTGAAGATGCAATCATCCATGC
TGGCTATGTTCTGGCCAAGCCGGGCGAAGGCTATCTCACCCGTCAGACAATCCTCGTGGAGGATGGCCGGGTTGTTTCAG
TCACGTCTGGCTACTCAACGCCGAAAGACTATGCGGTGATCAATCTGCGTGACGCATATGTTCTGCCCGGCCTGATCGAC
AGCCATGTGCACATTACCGGCGAGAATGGCCCGGAAGGCCGTATCAAGGAATTTGAGAACTCGGATGTCGATACAGCGTT
TGATGGCGCTGCGTTTGCGTTGACCACGCTGGAGGCAGGCTTCACGACCGTTCAGGATGTCGGGGCGCCCAATGATTCCA
TCTTCGGGCTGCGGGATGCCATCGCGCGGGGGGCTGTGCCGGGCCCGCGTCTGCGCGCATCGGGCGGTAGTGTGGCCGTT
ACGGGCGGGCATGGTGATATAAACGGCTATTCGGCCCGCGTGATGGCAGAATTCACGGGCGCCAATATCTGCAACGGGGC
GGACGATTGCCGCCGGGCTGTGCGTCAACAGATCAAGGAAGGCGCCGATCTGATCAAGATCACGGCAACAGGCGGCGTAC
TTTCCAATACGTCCGCGGGCCTGGAACAACAGTTCACGGAAGAAGAACTCGAAGCTATCGTAGATGCCGCGCACTCGATG
GGCAGGAAGGTTACTGCCCACGCGCATGGCAAGAGCGGTGTGGACGCCGCCCTTCGCGCCGGTATCGACTCGATCGAGCA
CGGCACCTATCTCGACGGGGAGTCGATTGCCCTGTTCAAGGAAAATGGTGCAACGCTGGTGCCGACGGTTCTCGCCGGCG
CGACTGTAACCGGATGGACCAATGAACCCTGGCTGCCGGCTGCCTCGCGAGCGAAGGCTGCGCAGGTTGGCCCGCTGATG
CTTGAAATGCTTCGCCGGGCGCATGAGGGCGGGGTCACTGTAGCGTTCGGGACCGACACCGGCGTCTCCCGCCATGGTGA
CAATGCCAAGGAATTTGCCTTGATGGTCGAGGCCGGATTCACGCCGGAAGAAGCAATCCGTTCGGCCACGGTGGTGGCGT
CAGAACATCTGGAAATGTCGCAGGATATAGGCACTCTGGAGGCTGGCAAATATGCCGACCTTATCGCGGTGACGGCCGAT
CCTCTCAAGGACATCCGGGCGCTTGAGGCAGTCAGCTTTGTCATGAAGGGCGGAGAGGTCTACAAGTCCGGCAAGTAA

Upstream 100 bases:

>100_bases
ATCTGCCCTGCCGCCATTTGATGGCGGTTCCTTGCTCTAAATTGTTGAACAGATGGCAGGAAACGCTACCGTACTGGCTT
GTTCCGGGGAGGTTATACCT

Downstream 100 bases:

>100_bases
TTTGCAGGGGCAGGGGAGGCGCGGCCTGTCGCTTTGACGGCGGAGGCTGCGCCGCTTATGCAATTCAAGTTGGTAAATCC
CGCCCGCCGGGCCGCGCCAC

Product: amidohydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MKKLTAAAICAMLLSAPAMAEDAIIHAGYVLAKPGEGYLTRQTILVEDGRVVSVTSGYSTPKDYAVINLRDAYVLPGLID
SHVHITGENGPEGRIKEFENSDVDTAFDGAAFALTTLEAGFTTVQDVGAPNDSIFGLRDAIARGAVPGPRLRASGGSVAV
TGGHGDINGYSARVMAEFTGANICNGADDCRRAVRQQIKEGADLIKITATGGVLSNTSAGLEQQFTEEELEAIVDAAHSM
GRKVTAHAHGKSGVDAALRAGIDSIEHGTYLDGESIALFKENGATLVPTVLAGATVTGWTNEPWLPAASRAKAAQVGPLM
LEMLRRAHEGGVTVAFGTDTGVSRHGDNAKEFALMVEAGFTPEEAIRSATVVASEHLEMSQDIGTLEAGKYADLIAVTAD
PLKDIRALEAVSFVMKGGEVYKSGK

Sequences:

>Translated_425_residues
MKKLTAAAICAMLLSAPAMAEDAIIHAGYVLAKPGEGYLTRQTILVEDGRVVSVTSGYSTPKDYAVINLRDAYVLPGLID
SHVHITGENGPEGRIKEFENSDVDTAFDGAAFALTTLEAGFTTVQDVGAPNDSIFGLRDAIARGAVPGPRLRASGGSVAV
TGGHGDINGYSARVMAEFTGANICNGADDCRRAVRQQIKEGADLIKITATGGVLSNTSAGLEQQFTEEELEAIVDAAHSM
GRKVTAHAHGKSGVDAALRAGIDSIEHGTYLDGESIALFKENGATLVPTVLAGATVTGWTNEPWLPAASRAKAAQVGPLM
LEMLRRAHEGGVTVAFGTDTGVSRHGDNAKEFALMVEAGFTPEEAIRSATVVASEHLEMSQDIGTLEAGKYADLIAVTAD
PLKDIRALEAVSFVMKGGEVYKSGK
>Mature_425_residues
MKKLTAAAICAMLLSAPAMAEDAIIHAGYVLAKPGEGYLTRQTILVEDGRVVSVTSGYSTPKDYAVINLRDAYVLPGLID
SHVHITGENGPEGRIKEFENSDVDTAFDGAAFALTTLEAGFTTVQDVGAPNDSIFGLRDAIARGAVPGPRLRASGGSVAV
TGGHGDINGYSARVMAEFTGANICNGADDCRRAVRQQIKEGADLIKITATGGVLSNTSAGLEQQFTEEELEAIVDAAHSM
GRKVTAHAHGKSGVDAALRAGIDSIEHGTYLDGESIALFKENGATLVPTVLAGATVTGWTNEPWLPAASRAKAAQVGPLM
LEMLRRAHEGGVTVAFGTDTGVSRHGDNAKEFALMVEAGFTPEEAIRSATVVASEHLEMSQDIGTLEAGKYADLIAVTAD
PLKDIRALEAVSFVMKGGEVYKSGK

Specific function: Unknown

COG id: COG1228

COG function: function code Q; Imidazolonepropionase and related amidohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.coelicolor SCO1861 [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322248, Length=322, Percent_Identity=31.6770186335404, Blast_Score=150, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: NA

Molecular weight: Translated: 44325; Mature: 44325

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLTAAAICAMLLSAPAMAEDAIIHAGYVLAKPGEGYLTRQTILVEDGRVVSVTSGYST
CCCHHHHHHHHHHHCCCCHHHCCEEECCEEEECCCCCCEEEEEEEEECCEEEEEECCCCC
PKDYAVINLRDAYVLPGLIDSHVHITGENGPEGRIKEFENSDVDTAFDGAAFALTTLEAG
CCCEEEEEECCCEECCCEECCEEEEECCCCCCCCHHCCCCCCCCCCCCCCEEEEEEHHCC
FTTVQDVGAPNDSIFGLRDAIARGAVPGPRLRASGGSVAVTGGHGDINGYSARVMAEFTG
CHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCEEEECCCCCCCCCEEEEEEEECC
ANICNGADDCRRAVRQQIKEGADLIKITATGGVLSNTSAGLEQQFTEEELEAIVDAAHSM
CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHC
GRKVTAHAHGKSGVDAALRAGIDSIEHGTYLDGESIALFKENGATLVPTVLAGATVTGWT
CCEEEEECCCCCCHHHHHHHCCHHCCCCCEECCCEEEEEECCCCEEEHHHHCCCEEECCC
NEPWLPAASRAKAAQVGPLMLEMLRRAHEGGVTVAFGTDTGVSRHGDNAKEFALMVEAGF
CCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHEEEEEECCC
TPEEAIRSATVVASEHLEMSQDIGTLEAGKYADLIAVTADPLKDIRALEAVSFVMKGGEV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCE
YKSGK
ECCCC
>Mature Secondary Structure
MKKLTAAAICAMLLSAPAMAEDAIIHAGYVLAKPGEGYLTRQTILVEDGRVVSVTSGYST
CCCHHHHHHHHHHHCCCCHHHCCEEECCEEEECCCCCCEEEEEEEEECCEEEEEECCCCC
PKDYAVINLRDAYVLPGLIDSHVHITGENGPEGRIKEFENSDVDTAFDGAAFALTTLEAG
CCCEEEEEECCCEECCCEECCEEEEECCCCCCCCHHCCCCCCCCCCCCCCEEEEEEHHCC
FTTVQDVGAPNDSIFGLRDAIARGAVPGPRLRASGGSVAVTGGHGDINGYSARVMAEFTG
CHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCEEEECCCCCCCCCEEEEEEEECC
ANICNGADDCRRAVRQQIKEGADLIKITATGGVLSNTSAGLEQQFTEEELEAIVDAAHSM
CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHC
GRKVTAHAHGKSGVDAALRAGIDSIEHGTYLDGESIALFKENGATLVPTVLAGATVTGWT
CCEEEEECCCCCCHHHHHHHCCHHCCCCCEECCCEEEEEECCCCEEEHHHHCCCEEECCC
NEPWLPAASRAKAAQVGPLMLEMLRRAHEGGVTVAFGTDTGVSRHGDNAKEFALMVEAGF
CCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHEEEEEECCC
TPEEAIRSATVVASEHLEMSQDIGTLEAGKYADLIAVTADPLKDIRALEAVSFVMKGGEV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCE
YKSGK
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]