| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799368
Identifier: 114799368
GI number: 114799368
Start: 402417
End: 403988
Strand: Reverse
Name: 114799368
Synonym: HNE_0404
Alternate gene names: NA
Gene position: 403988-402417 (Counterclockwise)
Preceding gene: 114800193
Following gene: 114799648
Centisome position: 10.9
GC content: 56.93
Gene sequence:
>1572_bases ATGCGTTTCAGCACGATCGGAAAGTGGAGCTTGAGAGCCGGAGGCGTGATCACAGTGTTGATCCTGCTGGCGGTGGCCGT CCTGTTCATTCTCATCAACCGCGACGTTGACCGGGTCTATGGCGGTCAAACCGGCGTTGCCGGTCATGCGCCGTTTCAGG CCGAAGCGAAACCAACCGCGATAACCCATGTCAGCGTCCTGTCGCCGGACGGCACAGAAATGCTGGCGAACAGGACTGTG CTGCTGGAGAACGGGGAGATTGTTTCTGTCGCGCCGGATGGTGAGGTTCCAGACGGAATGTTCGTCATTGACGGCGAGGG GAAATTCCTGATCCCCGGCCTCATCGATTCACATGTGCATCTGCAACGCAGCCCCAATGATCTGCTGCTGTATGTGGCCA ATGGTGTGACGCAAATCCGCAGCATGGGCGGGTCTGACGCAGACCTGGCGCTCAAGCGAGAGATAGAAAACGGCCGTATT GGGCCCCGCTTCTATGTGTCATCGACGGCGATGGCATCTGCGACCGGCTTGACCTCTGCCGGACCCGACTGGTTTTCCGG ACCTGTTGCCATCTGGTTTGCCGAGCTGGCCTTCAACATGCACTCTACGTCCAGTTCAGAACAGGCAGCTGAAGACGCGC GGTCCTTCATTCAGAAGGGTTATGACGGCATCAAGCTCTATGGGTTCCTCGACATGGACAGCTATCGTGCCATCCTGGAC GTTGCAGACGAACTTGATGTCCCAAGTGCCGGGCATTTGCCTGACGCAATGCCGCTGAGTGAGCTGCGCACAACGAAGCT GCGTGAAATTGCTCATATCGAGGAAATTGTAAAAGGCCTGCTTCTGGAGTTCGGCAGCTTCCGTAGTCAGGGAGGTGAGG CGTTTATCGAGTTCGTGGAAAGCCGGAAAGCCGAAATCATCTCCGATCTGGTGGCAAATGACGTCGCTGTGCACAGCACG CTCTGGCTGACCGAGAGCTTCAAGAAACAGGTATTTGATCTGGAGGCCGCCCTTGCCGAGGTGCCGCTGGAATATGCCAA TCCCGGTATCGTCGAAGGCAACTCAGTGCTGGGATTAGGCTGGCTTCCCGCGCGAAACAAATTTCATACCTACGCAGGCA ATACGCCCGAAGAAATTGCGCGGAACAAGGCGTTTTGGGATGCCCGCGAAGAAGCCCACCACATCCTGCTGAAGGCAATG GTGGAAGGCGGCGTCACAGTCCTTGCGGGAACAGATGCAAATGCATGGCTGACCATACCGGGTTTTTCCCTGCATGATGA ATTGCAGTCTCTGAGCCGTGCGGGAATGTCCCCGGCGCAGGCAATTTATGCGGCGACGGCCGCGCCCGCGCAGATCATCA GGAACAATGCCGGGATCATCGAAACCGGGCGCCGGGCGGATCTGGTTTTGCTGAACGAAAACCCGCTCACCGATATTGAA AACACAACATCCATCGACACGGTTATCCTGAACGGACGCATTCTCGATCGCGCCCAGCTCGACGCCATGCTGGAAGCCGT CAGAGAGACCAACGCAGAAAGCCGGAAGTTCGACCTAGAGCTCTATCAATAG
Upstream 100 bases:
>100_bases GAAACCTCCTTCCAAACGTCCAATTCGATCAATCTGGACGCTGATCCTGATGAGACGCGCTTGAAAGGCGCATCAGAGCA ATCAGACAGAGGGTGACCCC
Downstream 100 bases:
>100_bases CGTCTGCCGGTATCTCCGCTTCAGGGTTTCCGGCGGCAAGCCGATGCCTGCAACATCGCCGAAAGACATCAGGGAAAATC AAGCTCCGCGCTCAGACGCC
Product: amidohydrolase family protein
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Amidohydrolase Family; Secreted Amidohydrolase; Exported Amidohydrolase Family Protein; Metal Dependent Amidohydrolase
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MRFSTIGKWSLRAGGVITVLILLAVAVLFILINRDVDRVYGGQTGVAGHAPFQAEAKPTAITHVSVLSPDGTEMLANRTV LLENGEIVSVAPDGEVPDGMFVIDGEGKFLIPGLIDSHVHLQRSPNDLLLYVANGVTQIRSMGGSDADLALKREIENGRI GPRFYVSSTAMASATGLTSAGPDWFSGPVAIWFAELAFNMHSTSSSEQAAEDARSFIQKGYDGIKLYGFLDMDSYRAILD VADELDVPSAGHLPDAMPLSELRTTKLREIAHIEEIVKGLLLEFGSFRSQGGEAFIEFVESRKAEIISDLVANDVAVHST LWLTESFKKQVFDLEAALAEVPLEYANPGIVEGNSVLGLGWLPARNKFHTYAGNTPEEIARNKAFWDAREEAHHILLKAM VEGGVTVLAGTDANAWLTIPGFSLHDELQSLSRAGMSPAQAIYAATAAPAQIIRNNAGIIETGRRADLVLLNENPLTDIE NTTSIDTVILNGRILDRAQLDAMLEAVRETNAESRKFDLELYQ
Sequences:
>Translated_523_residues MRFSTIGKWSLRAGGVITVLILLAVAVLFILINRDVDRVYGGQTGVAGHAPFQAEAKPTAITHVSVLSPDGTEMLANRTV LLENGEIVSVAPDGEVPDGMFVIDGEGKFLIPGLIDSHVHLQRSPNDLLLYVANGVTQIRSMGGSDADLALKREIENGRI GPRFYVSSTAMASATGLTSAGPDWFSGPVAIWFAELAFNMHSTSSSEQAAEDARSFIQKGYDGIKLYGFLDMDSYRAILD VADELDVPSAGHLPDAMPLSELRTTKLREIAHIEEIVKGLLLEFGSFRSQGGEAFIEFVESRKAEIISDLVANDVAVHST LWLTESFKKQVFDLEAALAEVPLEYANPGIVEGNSVLGLGWLPARNKFHTYAGNTPEEIARNKAFWDAREEAHHILLKAM VEGGVTVLAGTDANAWLTIPGFSLHDELQSLSRAGMSPAQAIYAATAAPAQIIRNNAGIIETGRRADLVLLNENPLTDIE NTTSIDTVILNGRILDRAQLDAMLEAVRETNAESRKFDLELYQ >Mature_523_residues MRFSTIGKWSLRAGGVITVLILLAVAVLFILINRDVDRVYGGQTGVAGHAPFQAEAKPTAITHVSVLSPDGTEMLANRTV LLENGEIVSVAPDGEVPDGMFVIDGEGKFLIPGLIDSHVHLQRSPNDLLLYVANGVTQIRSMGGSDADLALKREIENGRI GPRFYVSSTAMASATGLTSAGPDWFSGPVAIWFAELAFNMHSTSSSEQAAEDARSFIQKGYDGIKLYGFLDMDSYRAILD VADELDVPSAGHLPDAMPLSELRTTKLREIAHIEEIVKGLLLEFGSFRSQGGEAFIEFVESRKAEIISDLVANDVAVHST LWLTESFKKQVFDLEAALAEVPLEYANPGIVEGNSVLGLGWLPARNKFHTYAGNTPEEIARNKAFWDAREEAHHILLKAM VEGGVTVLAGTDANAWLTIPGFSLHDELQSLSRAGMSPAQAIYAATAAPAQIIRNNAGIIETGRRADLVLLNENPLTDIE NTTSIDTVILNGRILDRAQLDAMLEAVRETNAESRKFDLELYQ
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56667; Mature: 56667
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSTIGKWSLRAGGVITVLILLAVAVLFILINRDVDRVYGGQTGVAGHAPFQAEAKPTA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCE ITHVSVLSPDGTEMLANRTVLLENGEIVSVAPDGEVPDGMFVIDGEGKFLIPGLIDSHVH EEEEEEECCCCHHHHHCCEEEEECCCEEEECCCCCCCCCEEEECCCCCEEECCCCCCCEE LQRSPNDLLLYVANGVTQIRSMGGSDADLALKREIENGRIGPRFYVSSTAMASATGLTSA EECCCCCEEEEECCCHHHHHHCCCCCCCHHEEEHHCCCCCCCEEEEECHHHHHHCCCCCC GPDWFSGPVAIWFAELAFNMHSTSSSEQAAEDARSFIQKGYDGIKLYGFLDMDSYRAILD CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH VADELDVPSAGHLPDAMPLSELRTTKLREIAHIEEIVKGLLLEFGSFRSQGGEAFIEFVE HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SRKAEIISDLVANDVAVHSTLWLTESFKKQVFDLEAALAEVPLEYANPGIVEGNSVLGLG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEECCCCEEEEE WLPARNKFHTYAGNTPEEIARNKAFWDAREEAHHILLKAMVEGGVTVLAGTDANAWLTIP CCCCCCCEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEC GFSLHDELQSLSRAGMSPAQAIYAATAAPAQIIRNNAGIIETGRRADLVLLNENPLTDIE CCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCEEECCCCCCEEEECCCCCCCCC NTTSIDTVILNGRILDRAQLDAMLEAVRETNAESRKFDLELYQ CCCCEEEEEECCEECCHHHHHHHHHHHHHCCCCCCEEEEEECC >Mature Secondary Structure MRFSTIGKWSLRAGGVITVLILLAVAVLFILINRDVDRVYGGQTGVAGHAPFQAEAKPTA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCE ITHVSVLSPDGTEMLANRTVLLENGEIVSVAPDGEVPDGMFVIDGEGKFLIPGLIDSHVH EEEEEEECCCCHHHHHCCEEEEECCCEEEECCCCCCCCCEEEECCCCCEEECCCCCCCEE LQRSPNDLLLYVANGVTQIRSMGGSDADLALKREIENGRIGPRFYVSSTAMASATGLTSA EECCCCCEEEEECCCHHHHHHCCCCCCCHHEEEHHCCCCCCCEEEEECHHHHHHCCCCCC GPDWFSGPVAIWFAELAFNMHSTSSSEQAAEDARSFIQKGYDGIKLYGFLDMDSYRAILD CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH VADELDVPSAGHLPDAMPLSELRTTKLREIAHIEEIVKGLLLEFGSFRSQGGEAFIEFVE HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SRKAEIISDLVANDVAVHSTLWLTESFKKQVFDLEAALAEVPLEYANPGIVEGNSVLGLG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEECCCCEEEEE WLPARNKFHTYAGNTPEEIARNKAFWDAREEAHHILLKAMVEGGVTVLAGTDANAWLTIP CCCCCCCEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEC GFSLHDELQSLSRAGMSPAQAIYAATAAPAQIIRNNAGIIETGRRADLVLLNENPLTDIE CCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCEEECCCCCCEEEECCCCCCCCC NTTSIDTVILNGRILDRAQLDAMLEAVRETNAESRKFDLELYQ CCCCEEEEEECCEECCHHHHHHHHHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA