| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is cbbZ [H]
Identifier: 114799358
GI number: 114799358
Start: 2348467
End: 2349099
Strand: Reverse
Name: cbbZ [H]
Synonym: HNE_2245
Alternate gene names: 114799358
Gene position: 2349099-2348467 (Counterclockwise)
Preceding gene: 114799032
Following gene: 114800349
Centisome position: 63.4
GC content: 62.09
Gene sequence:
>633_bases ATGCAGACCAAACCTGACCTCATCATCTTCGACTTTGATGGCACGTTGGCGGACAGCGTGAGCTTCTTTCGTGCGCTTTT GCCGGAGTTGTCTCAGAAGTTCCGGTTTCGGCTTCCCAGCCATGAGGAACAGGAGGCAATGCGGGGGCATCCGCCGCGGG AGGTGATGTCGTCGTTGGGCATTCCGGGTTGGAAGCTGCCGATGATTGCGGTCTATGCCCGGAAGCGGGCCCGCGCGGCC GAAGCGTTTCCACTGTTTGAGGGCACGTTGGACCTGCTGGACGCTGTGATGGCGAAGGGCATTCCGGTGGCGGTTGTTTC ATCGAACGCCGAGGCGGTCGTGCGCCGGGCGCTGGGGCCAGAGATCAGTTCACGGATTTCTGCCTGGAGCTGTGGCGCAG GCATGTTCGGCAAGGCGAAGCATTTTCGTGATGTGATGAAACGGCTGAAGGCCGACCCCGCGCGGACGCTGGCAGTGGGC GATGAGATCCGCGACATTGATGCGGCGCGCGAAGTGGGCATCTGCTGCGTGGCGGTCAGTTGGGGGTTTGCGCCGATTGA TGCGCTCAAAGCCGCCAGGCCGGATCATGCTTTCGATGATGGCCCCGCGCTCAAGGCTTTCCTCGTCGGCTGA
Upstream 100 bases:
>100_bases TGCCGTGATTGCGGGGCGCGAGGCGTATCTGGCCGGGCGGATGCCGAAGAAGCGTTATGCTGACCCGAGTTCACCTCTCG CGGGGCTTATATAATCCCGT
Downstream 100 bases:
>100_bases GTCCGGTTTCAATCCTTTGTGACCGGAATCTGCAGAGATCTTGCCTCGAAAAGGCTGGACATCCGGGCAGATTTTTCCGA GGCAAATGTAATATTGAAAC
Product: HAD family hydrolase
Products: NA
Alternate protein names: PGP; PGPase [H]
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MQTKPDLIIFDFDGTLADSVSFFRALLPELSQKFRFRLPSHEEQEAMRGHPPREVMSSLGIPGWKLPMIAVYARKRARAA EAFPLFEGTLDLLDAVMAKGIPVAVVSSNAEAVVRRALGPEISSRISAWSCGAGMFGKAKHFRDVMKRLKADPARTLAVG DEIRDIDAAREVGICCVAVSWGFAPIDALKAARPDHAFDDGPALKAFLVG
Sequences:
>Translated_210_residues MQTKPDLIIFDFDGTLADSVSFFRALLPELSQKFRFRLPSHEEQEAMRGHPPREVMSSLGIPGWKLPMIAVYARKRARAA EAFPLFEGTLDLLDAVMAKGIPVAVVSSNAEAVVRRALGPEISSRISAWSCGAGMFGKAKHFRDVMKRLKADPARTLAVG DEIRDIDAAREVGICCVAVSWGFAPIDALKAARPDHAFDDGPALKAFLVG >Mature_210_residues MQTKPDLIIFDFDGTLADSVSFFRALLPELSQKFRFRLPSHEEQEAMRGHPPREVMSSLGIPGWKLPMIAVYARKRARAA EAFPLFEGTLDLLDAVMAKGIPVAVVSSNAEAVVRRALGPEISSRISAWSCGAGMFGKAKHFRDVMKRLKADPARTLAVG DEIRDIDAAREVGICCVAVSWGFAPIDALKAARPDHAFDDGPALKAFLVG
Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate [H]
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.1.3.18 [H]
Molecular weight: Translated: 22864; Mature: 22864
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTKPDLIIFDFDGTLADSVSFFRALLPELSQKFRFRLPSHEEQEAMRGHPPREVMSSLG CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHCC IPGWKLPMIAVYARKRARAAEAFPLFEGTLDLLDAVMAKGIPVAVVSSNAEAVVRRALGP CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCH EISSRISAWSCGAGMFGKAKHFRDVMKRLKADPARTLAVGDEIRDIDAAREVGICCVAVS HHHHHHCHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHCEEEEEEC WGFAPIDALKAARPDHAFDDGPALKAFLVG CCCCHHHHHHHCCCCCCCCCCCCCEEEECC >Mature Secondary Structure MQTKPDLIIFDFDGTLADSVSFFRALLPELSQKFRFRLPSHEEQEAMRGHPPREVMSSLG CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHCC IPGWKLPMIAVYARKRARAAEAFPLFEGTLDLLDAVMAKGIPVAVVSSNAEAVVRRALGP CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCH EISSRISAWSCGAGMFGKAKHFRDVMKRLKADPARTLAVGDEIRDIDAAREVGICCVAVS HHHHHHCHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHCEEEEEEC WGFAPIDALKAARPDHAFDDGPALKAFLVG CCCCHHHHHHHCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8654968 [H]