| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is cysK [H]
Identifier: 114799333
GI number: 114799333
Start: 41629
End: 42612
Strand: Direct
Name: cysK [H]
Synonym: HNE_0049
Alternate gene names: 114799333
Gene position: 41629-42612 (Clockwise)
Preceding gene: 114800485
Following gene: 114798524
Centisome position: 1.12
GC content: 63.21
Gene sequence:
>984_bases ATGGCCGGAACAGTGAAACTCGAGGGCGGCGTAACGCTCGATGGACCGCGCGGCCGGATTTACGGCTCGATCCTTGAAAC GGTTGGCGCGACCCCGCTCGTTCGCGCCGAAAAGTTCGCCAAGGCCGAGGGCGTTGACGCCGACATCCTCTTCAAGCTGG AATTCTTCAATCCCCTCGCCAGCGTCAAGGACCGGATCGGCCTCGCGATGATCCTGGGACTGGAGGCCGAAGGCAAGCTG AAGCCCGGCGGTGTCCTGATTGAGCCTACCTCGGGCAATACCGGCATTGGCCTCGCCTTCGTGGCGGCCGCCAAAGGCTA CCGCCTGATCCTCACCATGCCGGAGTCCATGTCTGTGGAGCGGCGCAAGATGCTGGCCTATCTCGGCGCCGAGCTGGTGC TGACGCCGAAAGAAAAAGGCATGGGCGGGGCCATCGCGCGGGCCAATGAACTGCTCGCCGAAATCCCTGGCGCCGTCAGC CCCAGCCAGTTCGACAATCCGGCAAACCCGGCGATCCATGAGAAGACAACGGCAGAGGAAATCTGGTCCGATACCGCCGG CGCTGTCGACGCCATTGTTTCGGGCATCGGCACGGGTGGCACGTTCACGGGCGTTGGGCGCGTGCTGAAGCCCCGCAAGC CGAGCCTGAAGATGTTTGCGATTGAGCCTGAAGCCTCCCCGGTCTTGTCCGGCGGCGCACCTGGCCCCCATATGATCCAG GGCATCGGCGCCGGCTTTGTGCCGGGTAACGCGGATACGAGCCTGATTGACGAGATCGTGAAAGTCTCCAATGAGGAATC CTTTGCGATGGCCCGTAAGCTCGCCAAGACCGAAGGCATTCCCGGTGGTATTTCTTCCGGCGCGGCAGCCGCGGCAGCCG TTCGCATCGGCAAGCGGCCGGAGATGGCGGGCAAGACAATCGTGGTCATCCTGGCAAGCTTTGCCGAGCGCTATCTCTCA ACGGCTCTGTTTGACGGCGTCTGA
Upstream 100 bases:
>100_bases GCTAGGCTGAGTTTAGCAGAGCTTACCCGAGTTTGGTTGCCATTCTCCCGCTGCGGGCCGATATTCTCCCTTCAAGATAA TCCTGAAGGGAGAGTTCGGC
Downstream 100 bases:
>100_bases CAGGGTAGGGGGCTTCGCAGCGGCAGGGCTCGCCAATCTTCGGCAGCTGGTGGATAGATGCCACCAGAAAATTCATCCGG AGGAAGCCGATTATGGCGCG
Product: cysteine synthase A
Products: NA
Alternate protein names: OAS sulfhydrylase; OASS; Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine-specific cysteine synthase; Sulfide-dependent cysteine synthase [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MAGTVKLEGGVTLDGPRGRIYGSILETVGATPLVRAEKFAKAEGVDADILFKLEFFNPLASVKDRIGLAMILGLEAEGKL KPGGVLIEPTSGNTGIGLAFVAAAKGYRLILTMPESMSVERRKMLAYLGAELVLTPKEKGMGGAIARANELLAEIPGAVS PSQFDNPANPAIHEKTTAEEIWSDTAGAVDAIVSGIGTGGTFTGVGRVLKPRKPSLKMFAIEPEASPVLSGGAPGPHMIQ GIGAGFVPGNADTSLIDEIVKVSNEESFAMARKLAKTEGIPGGISSGAAAAAAVRIGKRPEMAGKTIVVILASFAERYLS TALFDGV
Sequences:
>Translated_327_residues MAGTVKLEGGVTLDGPRGRIYGSILETVGATPLVRAEKFAKAEGVDADILFKLEFFNPLASVKDRIGLAMILGLEAEGKL KPGGVLIEPTSGNTGIGLAFVAAAKGYRLILTMPESMSVERRKMLAYLGAELVLTPKEKGMGGAIARANELLAEIPGAVS PSQFDNPANPAIHEKTTAEEIWSDTAGAVDAIVSGIGTGGTFTGVGRVLKPRKPSLKMFAIEPEASPVLSGGAPGPHMIQ GIGAGFVPGNADTSLIDEIVKVSNEESFAMARKLAKTEGIPGGISSGAAAAAAVRIGKRPEMAGKTIVVILASFAERYLS TALFDGV >Mature_326_residues AGTVKLEGGVTLDGPRGRIYGSILETVGATPLVRAEKFAKAEGVDADILFKLEFFNPLASVKDRIGLAMILGLEAEGKLK PGGVLIEPTSGNTGIGLAFVAAAKGYRLILTMPESMSVERRKMLAYLGAELVLTPKEKGMGGAIARANELLAEIPGAVSP SQFDNPANPAIHEKTTAEEIWSDTAGAVDAIVSGIGTGGTFTGVGRVLKPRKPSLKMFAIEPEASPVLSGGAPGPHMIQG IGAGFVPGNADTSLIDEIVKVSNEESFAMARKLAKTEGIPGGISSGAAAAAAVRIGKRPEMAGKTIVVILASFAERYLST ALFDGV
Specific function: Catalyzes the conversion of O-acetylserine (OAS) to cysteine through the elimination of acetate and addition of hydrogen sulfide [H]
COG id: COG0031
COG function: function code E; Cysteine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cysteine synthase/cystathionine beta- synthase family [H]
Homologues:
Organism=Homo sapiens, GI295821202, Length=315, Percent_Identity=40.6349206349206, Blast_Score=225, Evalue=3e-59, Organism=Homo sapiens, GI295821200, Length=315, Percent_Identity=40.6349206349206, Blast_Score=225, Evalue=3e-59, Organism=Homo sapiens, GI4557415, Length=315, Percent_Identity=40.6349206349206, Blast_Score=225, Evalue=3e-59, Organism=Escherichia coli, GI1788754, Length=307, Percent_Identity=54.3973941368078, Blast_Score=280, Evalue=8e-77, Organism=Escherichia coli, GI2367138, Length=303, Percent_Identity=40.9240924092409, Blast_Score=214, Evalue=5e-57, Organism=Caenorhabditis elegans, GI115535073, Length=301, Percent_Identity=53.156146179402, Blast_Score=293, Evalue=8e-80, Organism=Caenorhabditis elegans, GI17535051, Length=300, Percent_Identity=51, Blast_Score=290, Evalue=5e-79, Organism=Caenorhabditis elegans, GI17562970, Length=303, Percent_Identity=49.1749174917492, Blast_Score=289, Evalue=2e-78, Organism=Caenorhabditis elegans, GI32566674, Length=295, Percent_Identity=49.8305084745763, Blast_Score=283, Evalue=8e-77, Organism=Caenorhabditis elegans, GI17561720, Length=300, Percent_Identity=49, Blast_Score=261, Evalue=4e-70, Organism=Caenorhabditis elegans, GI32566672, Length=215, Percent_Identity=50.2325581395349, Blast_Score=218, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17534315, Length=324, Percent_Identity=41.6666666666667, Blast_Score=199, Evalue=1e-51, Organism=Caenorhabditis elegans, GI25147552, Length=320, Percent_Identity=40.3125, Blast_Score=191, Evalue=4e-49, Organism=Caenorhabditis elegans, GI17561716, Length=118, Percent_Identity=50.8474576271186, Blast_Score=120, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6321594, Length=319, Percent_Identity=37.9310344827586, Blast_Score=189, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6321449, Length=318, Percent_Identity=32.0754716981132, Blast_Score=99, Evalue=7e-22, Organism=Drosophila melanogaster, GI24643623, Length=318, Percent_Identity=38.0503144654088, Blast_Score=198, Evalue=4e-51, Organism=Drosophila melanogaster, GI20129101, Length=318, Percent_Identity=38.0503144654088, Blast_Score=198, Evalue=4e-51,
Paralogues:
None
Copy number: 2820 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001216 - InterPro: IPR005856 - InterPro: IPR005859 - InterPro: IPR001926 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =2.5.1.47 [H]
Molecular weight: Translated: 33668; Mature: 33537
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGTVKLEGGVTLDGPRGRIYGSILETVGATPLVRAEKFAKAEGVDADILFKLEFFNPLA CCCEEEECCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEHHHCHHH SVKDRIGLAMILGLEAEGKLKPGGVLIEPTSGNTGIGLAFVAAAKGYRLILTMPESMSVE HHHHHCCEEEEEEECCCCCCCCCCEEEECCCCCCCCHHHEEECCCCCEEEEECCCCCCHH RRKMLAYLGAELVLTPKEKGMGGAIARANELLAEIPGAVSPSQFDNPANPAIHEKTTAEE HHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH IWSDTAGAVDAIVSGIGTGGTFTGVGRVLKPRKPSLKMFAIEPEASPVLSGGAPGPHMIQ HHCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHH GIGAGFVPGNADTSLIDEIVKVSNEESFAMARKLAKTEGIPGGISSGAAAAAAVRIGKRP HCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC EMAGKTIVVILASFAERYLSTALFDGV CCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGTVKLEGGVTLDGPRGRIYGSILETVGATPLVRAEKFAKAEGVDADILFKLEFFNPLA CCEEEECCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEHHHCHHH SVKDRIGLAMILGLEAEGKLKPGGVLIEPTSGNTGIGLAFVAAAKGYRLILTMPESMSVE HHHHHCCEEEEEEECCCCCCCCCCEEEECCCCCCCCHHHEEECCCCCEEEEECCCCCCHH RRKMLAYLGAELVLTPKEKGMGGAIARANELLAEIPGAVSPSQFDNPANPAIHEKTTAEE HHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH IWSDTAGAVDAIVSGIGTGGTFTGVGRVLKPRKPSLKMFAIEPEASPVLSGGAPGPHMIQ HHCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHH GIGAGFVPGNADTSLIDEIVKVSNEESFAMARKLAKTEGIPGGISSGAAAAAAVRIGKRP HCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC EMAGKTIVVILASFAERYLSTALFDGV CCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]