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The map label for this gene is 114799297

Identifier: 114799297

GI number: 114799297

Start: 2418981

End: 2419568

Strand: Reverse

Name: 114799297

Synonym: HNE_2320

Alternate gene names: NA

Gene position: 2419568-2418981 (Counterclockwise)

Preceding gene: 114799493

Following gene: 114800338

Centisome position: 65.31

GC content: 62.59

Gene sequence:

>588_bases
TTGGGCGCGCGAGATACTCGGGACATGATTGTCGCTGCGGCCGATGATCTGTTCTACCGGCAGGGGTTTGACCACACATC
GTTTGCTGACATTGCCGGAACGGTGAGTTTGTCGCGCGGGAACTTTTACTATCACTTCCGGACCAAGGACGAGATCCTCG
ATGCGGTCATCGGCCTGCGTCTGGAGGCAACGCGGGCGATGTTGACCGATTGGGCGCTCGAAAGCGCCAGCCCGGTGGTG
CGGATCAAATGCTTCATCCGTATTCTGATCGTAAATCAAACGAAGATCATGGCCTATGGCTGTCCGGTGGGGACGCTGTG
TCAGGAACTGGCGAAGCTGGAGCATGCCGCCAAGGGGCGCGCCGCGGAGGTCTTCGCGCTGTTCCGGGAATGGTTGGCGG
AGGCATTCCGCACGCTGGGCGCAGGGGATGAGGCGGAGGCGCTGGCGCTGCATGTGCTTGTCTGGTCGCAGGGCACGGCG
ACGCTTGCCAATGCCTTCCGTGATGAGGCTTTCGTGCGGCGCGAAGTGGATGGGATGTGCACCTGGGTGGAGGCGCAGGC
GGCGCGTCTTTCCGGGACGGCGCGGTGA

Upstream 100 bases:

>100_bases
TTAGGACAAACGACCTATTGCAAGATTAGGTCATTTGTCCTACTGCGGATTACATACTTGGCATCCGGGCCAAAAAGAAA
CTTCGGGCAGGAGGCATGCA

Downstream 100 bases:

>100_bases
ATTTCAGGAGGAGACGCAGATGTTCTTTGTTCAGCTCAGATTTGCGGCCAACAAGGCGGCGGCGCCGCAATTCATGGAGG
CCCACAATGCCTGGATCAGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MGARDTRDMIVAAADDLFYRQGFDHTSFADIAGTVSLSRGNFYYHFRTKDEILDAVIGLRLEATRAMLTDWALESASPVV
RIKCFIRILIVNQTKIMAYGCPVGTLCQELAKLEHAAKGRAAEVFALFREWLAEAFRTLGAGDEAEALALHVLVWSQGTA
TLANAFRDEAFVRREVDGMCTWVEAQAARLSGTAR

Sequences:

>Translated_195_residues
MGARDTRDMIVAAADDLFYRQGFDHTSFADIAGTVSLSRGNFYYHFRTKDEILDAVIGLRLEATRAMLTDWALESASPVV
RIKCFIRILIVNQTKIMAYGCPVGTLCQELAKLEHAAKGRAAEVFALFREWLAEAFRTLGAGDEAEALALHVLVWSQGTA
TLANAFRDEAFVRREVDGMCTWVEAQAARLSGTAR
>Mature_194_residues
GARDTRDMIVAAADDLFYRQGFDHTSFADIAGTVSLSRGNFYYHFRTKDEILDAVIGLRLEATRAMLTDWALESASPVVR
IKCFIRILIVNQTKIMAYGCPVGTLCQELAKLEHAAKGRAAEVFALFREWLAEAFRTLGAGDEAEALALHVLVWSQGTAT
LANAFRDEAFVRREVDGMCTWVEAQAARLSGTAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21582; Mature: 21451

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGARDTRDMIVAAADDLFYRQGFDHTSFADIAGTVSLSRGNFYYHFRTKDEILDAVIGLR
CCCCCCHHHEEHHHHHHHHHCCCCCCCHHHHHHEEEEECCCEEEEEECHHHHHHHHHCCH
LEATRAMLTDWALESASPVVRIKCFIRILIVNQTKIMAYGCPVGTLCQELAKLEHAAKGR
HHHHHHHHHHHHHHCCCCCEEHEEHEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCCC
AAEVFALFREWLAEAFRTLGAGDEAEALALHVLVWSQGTATLANAFRDEAFVRREVDGMC
HHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCE
TWVEAQAARLSGTAR
EHHHHHHHHHCCCCC
>Mature Secondary Structure 
GARDTRDMIVAAADDLFYRQGFDHTSFADIAGTVSLSRGNFYYHFRTKDEILDAVIGLR
CCCCCHHHEEHHHHHHHHHCCCCCCCHHHHHHEEEEECCCEEEEEECHHHHHHHHHCCH
LEATRAMLTDWALESASPVVRIKCFIRILIVNQTKIMAYGCPVGTLCQELAKLEHAAKGR
HHHHHHHHHHHHHHCCCCCEEHEEHEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCCC
AAEVFALFREWLAEAFRTLGAGDEAEALALHVLVWSQGTATLANAFRDEAFVRREVDGMC
HHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCE
TWVEAQAARLSGTAR
EHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1339371 [H]