| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yeeA [H]
Identifier: 114799218
GI number: 114799218
Start: 1632909
End: 1634987
Strand: Direct
Name: yeeA [H]
Synonym: HNE_1600
Alternate gene names: 114799218
Gene position: 1632909-1634987 (Clockwise)
Preceding gene: 114797198
Following gene: 114798366
Centisome position: 44.07
GC content: 55.99
Gene sequence:
>2079_bases ATGATGATCATCCGTCCCGTGATCATTGAGCCGCTGGACACCGAATGGACCGAAGCAAAGGCTAAGATCATCGAACAGGT GACGCGAATTGAAACGGCTAAATCATATATCGCCACCATTCGGGAACAGGCAGCTACGGAGTTCAAGGCGACGGGCGACA AAGGTCGGGAAGCTCAGCGCCAACAGGAAATCACCAATCTGCGGTCTACAATTACGCGTGCAGAGAACAGGGCTAAGGAA CTGCACACTGCCTTTACGGACAGGTTGTCTGAGTTCCGGGTTCTTGACCCGGCCTGCGGATCGGGAAATTTCCTCTACCT TTCTTTGAAAGCACTTAAGGACATTGAGCATCGCGCTAACGTCGAGTTCGAAGCCTTCGGATTCGCGCGGCGACCTCCTA AAGTGGGGCCCGAAGCGGTGAAGGGTATTGAGATCAATCCCTACGCGGCGGAGCTTGCTCGTGTCTCGATTTGGATTGGC GAAATCCAGTGGATGCGCGCCAATGGTTTTGAAGCCACGACCAATCCGATCCTGAAACCGCTCAATAACATCGAATGCCG GGACGCGGTACTGAACCCGGACGGAACGCGGGCGGAATGGCCGGACGTCGATGTGGTGGTTGGGAACCCGCCGTTCCTGG GCGGCAAGCGACTTCGCGACGAACTTGGCGGCCACTACGTCGATACCTTATTCTCAGCGTGGCGCGCCTCCGTTCGGCCT GAAGCAGACCTCGTGCTCTATTGGTTTGCTCGGTCCGGAGAGCTTATACAAACTGGCCGTCTCAAGCGTGCGGGACTCGT ATCAACAAACTCGATTCGCGGCGGAGCGAACCGAGACACATTACGCAGTGCATTGGGGGATGGCCGTATTTTTGATGCTT GGGCCGATGAACCTTGGATTGTCGATGGTGCCGCCGTTCGCGTGTCACTGTTATGCTTCGACAATGGAGCAACGGTCGAC CTCCGTTTGGACGGCCATTTAGTCGATGAAATCTTCGAGGACCTTACAGCCCGCCCAATCGGTGGAACATCTGTAAACCT TACCAATTCCGTTCGCATGGTTGATAATGGCGAGATTGCTTTTCAGGGTTTCAAGTTCGGCGGCCCATTCGAGATAGACG ATTCAACTGCAATTGCGGTTCTTAATGAACCCCTCAATCCCAATGGAATGAGAAACTCAAAAGTCGTTCGGCAATGGCAC AACGGCATGGATATTACGAGACGTCCTGAAATCCGTTGGTGTTTTGACTTCGGGGAATTGAGTGAGCGCGATGCAGTCCT ATTCGAGCGACCGTACAAGGTTCTTCGTGATCAATGGGACGACGAAAACCGAAAGCGCCTAAAAGCAGGTAATCGACCGC TTCGCAACGGCGAGGGAAACACAGCAGTGACGTGGTGGCGTCATCAGCGCCCGCGCACTGAGCTTAGGGTTGCATTGACT GGTCTCAGACGTTTTATCGCGACCCCTGAGGTCTCAAAGCATCGGGTATTTGTGTGGTTTGACGCAGGGTCCATGGCTTC GGGTTCGGTGTACGCCATCGCCCGTGACGACGACACAACGTTCGGCATTCTCCACTCGCGATTCCATGAAATTTGGGCTC TTCGGATGGGAACTTCGCTTGAGGATCGGCCCCGCTACACACCCTCGACAACATTCGAAACCTTCCCTTTCCCCGAAGGT CTGACGCCCAACATTCCTGCCGCTCACTACGCCGACGATCCACGCGCCCAGGCCATTGCGGCGGCGGCGGCGCGGCTGAA CAAGCTGCGCGAAAACTGGCTGAACCCGCCGGACCTGGTTCAGCGGGTGCCGGAAGTCGTGCCGGGCTATCCCGACCGCA TCCTGCCCGTGGATGAGCGGGCCGCTGACATCCTGAAGAAGCGCACGCTGACCAATCTCTACAATGAACGCCCAGCCTGG CTCGACCATGCCCACCGCGATCTCGACCGCGCCGTAGCAGCTGCCTATGGCTGGCAAGCCGACTTTGATTCAGGGGTGCT GACGGAAGATGAAATCTTGAAACGTCTGTTCGAACTCAATCAGGAGCGCGCCAAAATGGATTCATCTGAAGGCGCTTGA
Upstream 100 bases:
>100_bases GCATTATAGCGATGTTCGCAGCGGCGACCTGCACGAGCTTCGCGGGCAGGCCCAGCAGGGGGTCGATTTCCTCGTGGATT GCGGTGGGGCTGGTCTGGTC
Downstream 100 bases:
>100_bases ACGGCTGCGATCTGTAGCGAAATCAAAGCGACCGGAGTTGAAAGATTTCGCCAAATCGGCTAGTTCCTTATGTATAAACG ATAATATCAGGACTCCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: Modification methylase BsuMORF677P; M.BsuMORF677P [H]
Number of amino acids: Translated: 692; Mature: 692
Protein sequence:
>692_residues MMIIRPVIIEPLDTEWTEAKAKIIEQVTRIETAKSYIATIREQAATEFKATGDKGREAQRQQEITNLRSTITRAENRAKE LHTAFTDRLSEFRVLDPACGSGNFLYLSLKALKDIEHRANVEFEAFGFARRPPKVGPEAVKGIEINPYAAELARVSIWIG EIQWMRANGFEATTNPILKPLNNIECRDAVLNPDGTRAEWPDVDVVVGNPPFLGGKRLRDELGGHYVDTLFSAWRASVRP EADLVLYWFARSGELIQTGRLKRAGLVSTNSIRGGANRDTLRSALGDGRIFDAWADEPWIVDGAAVRVSLLCFDNGATVD LRLDGHLVDEIFEDLTARPIGGTSVNLTNSVRMVDNGEIAFQGFKFGGPFEIDDSTAIAVLNEPLNPNGMRNSKVVRQWH NGMDITRRPEIRWCFDFGELSERDAVLFERPYKVLRDQWDDENRKRLKAGNRPLRNGEGNTAVTWWRHQRPRTELRVALT GLRRFIATPEVSKHRVFVWFDAGSMASGSVYAIARDDDTTFGILHSRFHEIWALRMGTSLEDRPRYTPSTTFETFPFPEG LTPNIPAAHYADDPRAQAIAAAAARLNKLRENWLNPPDLVQRVPEVVPGYPDRILPVDERAADILKKRTLTNLYNERPAW LDHAHRDLDRAVAAAYGWQADFDSGVLTEDEILKRLFELNQERAKMDSSEGA
Sequences:
>Translated_692_residues MMIIRPVIIEPLDTEWTEAKAKIIEQVTRIETAKSYIATIREQAATEFKATGDKGREAQRQQEITNLRSTITRAENRAKE LHTAFTDRLSEFRVLDPACGSGNFLYLSLKALKDIEHRANVEFEAFGFARRPPKVGPEAVKGIEINPYAAELARVSIWIG EIQWMRANGFEATTNPILKPLNNIECRDAVLNPDGTRAEWPDVDVVVGNPPFLGGKRLRDELGGHYVDTLFSAWRASVRP EADLVLYWFARSGELIQTGRLKRAGLVSTNSIRGGANRDTLRSALGDGRIFDAWADEPWIVDGAAVRVSLLCFDNGATVD LRLDGHLVDEIFEDLTARPIGGTSVNLTNSVRMVDNGEIAFQGFKFGGPFEIDDSTAIAVLNEPLNPNGMRNSKVVRQWH NGMDITRRPEIRWCFDFGELSERDAVLFERPYKVLRDQWDDENRKRLKAGNRPLRNGEGNTAVTWWRHQRPRTELRVALT GLRRFIATPEVSKHRVFVWFDAGSMASGSVYAIARDDDTTFGILHSRFHEIWALRMGTSLEDRPRYTPSTTFETFPFPEG LTPNIPAAHYADDPRAQAIAAAAARLNKLRENWLNPPDLVQRVPEVVPGYPDRILPVDERAADILKKRTLTNLYNERPAW LDHAHRDLDRAVAAAYGWQADFDSGVLTEDEILKRLFELNQERAKMDSSEGA >Mature_692_residues MMIIRPVIIEPLDTEWTEAKAKIIEQVTRIETAKSYIATIREQAATEFKATGDKGREAQRQQEITNLRSTITRAENRAKE LHTAFTDRLSEFRVLDPACGSGNFLYLSLKALKDIEHRANVEFEAFGFARRPPKVGPEAVKGIEINPYAAELARVSIWIG EIQWMRANGFEATTNPILKPLNNIECRDAVLNPDGTRAEWPDVDVVVGNPPFLGGKRLRDELGGHYVDTLFSAWRASVRP EADLVLYWFARSGELIQTGRLKRAGLVSTNSIRGGANRDTLRSALGDGRIFDAWADEPWIVDGAAVRVSLLCFDNGATVD LRLDGHLVDEIFEDLTARPIGGTSVNLTNSVRMVDNGEIAFQGFKFGGPFEIDDSTAIAVLNEPLNPNGMRNSKVVRQWH NGMDITRRPEIRWCFDFGELSERDAVLFERPYKVLRDQWDDENRKRLKAGNRPLRNGEGNTAVTWWRHQRPRTELRVALT GLRRFIATPEVSKHRVFVWFDAGSMASGSVYAIARDDDTTFGILHSRFHEIWALRMGTSLEDRPRYTPSTTFETFPFPEG LTPNIPAAHYADDPRAQAIAAAAARLNKLRENWLNPPDLVQRVPEVVPGYPDRILPVDERAADILKKRTLTNLYNERPAW LDHAHRDLDRAVAAAYGWQADFDSGVLTEDEILKRLFELNQERAKMDSSEGA
Specific function: Unknown
COG id: COG1002
COG function: function code V; Type II restriction enzyme, methylase subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78123; Mature: 78123
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIIRPVIIEPLDTEWTEAKAKIIEQVTRIETAKSYIATIREQAATEFKATGDKGREAQR CEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH QQEITNLRSTITRAENRAKELHTAFTDRLSEFRVLDPACGSGNFLYLSLKALKDIEHRAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCEEEEEHHHHHHHHHHCC VEFEAFGFARRPPKVGPEAVKGIEINPYAAELARVSIWIGEIQWMRANGFEATTNPILKP CCEEEECCCCCCCCCCHHHHCCCCCCHHHHHHHHHEEEEEEEEEEECCCCCCCCCHHHHC LNNIECRDAVLNPDGTRAEWPDVDVVVGNPPFLGGKRLRDELGGHYVDTLFSAWRASVRP CCCCCHHHCEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCC EADLVLYWFARSGELIQTGRLKRAGLVSTNSIRGGANRDTLRSALGDGRIFDAWADEPWI CCCEEEEEEECCCCEEECCCCCCCCCEECCCCCCCCCHHHHHHHHCCCCEEECCCCCCEE VDGAAVRVSLLCFDNGATVDLRLDGHLVDEIFEDLTARPIGGTSVNLTNSVRMVDNGEIA EECCEEEEEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCEE FQGFKFGGPFEIDDSTAIAVLNEPLNPNGMRNSKVVRQWHNGMDITRRPEIRWCFDFGEL EEEEECCCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCC SERDAVLFERPYKVLRDQWDDENRKRLKAGNRPLRNGEGNTAVTWWRHQRPRTELRVALT CCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH GLRRFIATPEVSKHRVFVWFDAGSMASGSVYAIARDDDTTFGILHSRFHEIWALRMGTSL HHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC EDRPRYTPSTTFETFPFPEGLTPNIPAAHYADDPRAQAIAAAAARLNKLRENWLNPPDLV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH QRVPEVVPGYPDRILPVDERAADILKKRTLTNLYNERPAWLDHAHRDLDRAVAAAYGWQA HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC DFDSGVLTEDEILKRLFELNQERAKMDSSEGA CCCCCCCCHHHHHHHHHHHCHHHHHCCCCCCC >Mature Secondary Structure MMIIRPVIIEPLDTEWTEAKAKIIEQVTRIETAKSYIATIREQAATEFKATGDKGREAQR CEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH QQEITNLRSTITRAENRAKELHTAFTDRLSEFRVLDPACGSGNFLYLSLKALKDIEHRAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCEEEEEHHHHHHHHHHCC VEFEAFGFARRPPKVGPEAVKGIEINPYAAELARVSIWIGEIQWMRANGFEATTNPILKP CCEEEECCCCCCCCCCHHHHCCCCCCHHHHHHHHHEEEEEEEEEEECCCCCCCCCHHHHC LNNIECRDAVLNPDGTRAEWPDVDVVVGNPPFLGGKRLRDELGGHYVDTLFSAWRASVRP CCCCCHHHCEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCC EADLVLYWFARSGELIQTGRLKRAGLVSTNSIRGGANRDTLRSALGDGRIFDAWADEPWI CCCEEEEEEECCCCEEECCCCCCCCCEECCCCCCCCCHHHHHHHHCCCCEEECCCCCCEE VDGAAVRVSLLCFDNGATVDLRLDGHLVDEIFEDLTARPIGGTSVNLTNSVRMVDNGEIA EECCEEEEEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCEE FQGFKFGGPFEIDDSTAIAVLNEPLNPNGMRNSKVVRQWHNGMDITRRPEIRWCFDFGEL EEEEECCCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCC SERDAVLFERPYKVLRDQWDDENRKRLKAGNRPLRNGEGNTAVTWWRHQRPRTELRVALT CCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH GLRRFIATPEVSKHRVFVWFDAGSMASGSVYAIARDDDTTFGILHSRFHEIWALRMGTSL HHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC EDRPRYTPSTTFETFPFPEGLTPNIPAAHYADDPRAQAIAAAAARLNKLRENWLNPPDLV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH QRVPEVVPGYPDRILPVDERAADILKKRTLTNLYNERPAWLDHAHRDLDRAVAAAYGWQA HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC DFDSGVLTEDEILKRLFELNQERAKMDSSEGA CCCCCCCCHHHHHHHHHHHCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]