| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is amsE [H]
Identifier: 114799183
GI number: 114799183
Start: 774989
End: 776116
Strand: Direct
Name: amsE [H]
Synonym: HNE_0766
Alternate gene names: 114799183
Gene position: 774989-776116 (Clockwise)
Preceding gene: 114797969
Following gene: 114798595
Centisome position: 20.92
GC content: 64.1
Gene sequence:
>1128_bases ATGCCCCGGCCGCCAAAACTGGCCGATCAAGCGGAATACCCCATGGCAACCATCGACATCCTCATGCCGGCCTACAATGC TGCGGCCACCATCGAGGCGGCTGTCGAAAGTCTCCGCGCACAGACGGTCTCCGATTTCCGCATCATCATTATTGATGATG GTTCGACGGACGAGACCCCGGCCATCCTCGCCCGCCTCGCCGCGCTGGATCCCCGCCTGGTCGTTATCCGCAAGGAAAAC GCCGGCATTGTCGAGGCGCGCAACACCGCGCTCTCCCATGCCGAGGCCGAGTTCATCGCCTGCCTCGATGCCGACGACAT CTCCCTGCCGAACCGGCTTGAGCTCACCCTGAATTATCTGCGCGCCCATCCTGAATGTATCGCCGTCGGTGGCCGGGTTC AGCATATCGACGAAACCGGCAAACCCCTGCCGGGCGTCGATCAGCCCGCTGATCCCGAAGGCGCCCGCGTCGACACCATT CCCGCCCGCGATCCCTACATCATCCACTCCACCCTGATGACCCGCCGCGCCGAGGTCGAAGCGGTGGGGCGTTACCGCCA TGTGCCTTACTCTGAAGATACCGATCTCTTCTGGCGCCTGGGCGAGCGGGGCAGGCTGGTCATCCTGCCCGAAATCCTCA CCCTCTACCGGGTTCACACTGCCAGCGTCTCCAGCACGCTCCATAATGGCCGGGTCATGGCCGTCGGCTGCCAGCTCGGC GCCCGGTCTGCCGCCCGCCGCCGCGCCGGCAGGCCTGATATCGCCTTCTCGAAGGCCGCTTATGAAACCCTGAAAAAACA GCCCGGCCTCGAACAGATGGTCGCGTCCGTTTCGGTAAACTTTGATGAGGCCGACGAAAAACACTTCCGCATGGCCGTCG CGGTCAAGCTGATGGAAATGACCCGCATGCGCCCGTTCGAGCCCGATCGCGCCGATTGCGCCTATATCCGCGATGCCTGG CAATACGCTGGCAGGCTCGATACGGAAAACCGCAACCAGTTCTCCTGGTATCTCACCGTCACCGCCGCCCGCCTCATCCG CGTCGGGCGGCTGGGAGACGCGCTGGCGCTTCTGCCGCCGCGTTTCCTCCCCATCGCCTTTGCCCGCTTCGTGAAAGGGC AGGGCTGA
Upstream 100 bases:
>100_bases GTGATAGACCCCGCAACGTGCAGCCCCGGCGAACGTCTCGCCAGCTATGGTCAGGATATTGAAGGCGGTTATCTCTGCAT AAAGCGATAGCTGTGTAAGG
Downstream 100 bases:
>100_bases GCGCCCGGCTTATTCCTCCAGCACCGGCGTTTCCTGGATCGACACCAGATACGCCAGCAACACATCCATCCCCAGATCGC CGAACACGAAGCCCGGCATG
Product: glycosyl transferase group 2 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MPRPPKLADQAEYPMATIDILMPAYNAAATIEAAVESLRAQTVSDFRIIIIDDGSTDETPAILARLAALDPRLVVIRKEN AGIVEARNTALSHAEAEFIACLDADDISLPNRLELTLNYLRAHPECIAVGGRVQHIDETGKPLPGVDQPADPEGARVDTI PARDPYIIHSTLMTRRAEVEAVGRYRHVPYSEDTDLFWRLGERGRLVILPEILTLYRVHTASVSSTLHNGRVMAVGCQLG ARSAARRRAGRPDIAFSKAAYETLKKQPGLEQMVASVSVNFDEADEKHFRMAVAVKLMEMTRMRPFEPDRADCAYIRDAW QYAGRLDTENRNQFSWYLTVTAARLIRVGRLGDALALLPPRFLPIAFARFVKGQG
Sequences:
>Translated_375_residues MPRPPKLADQAEYPMATIDILMPAYNAAATIEAAVESLRAQTVSDFRIIIIDDGSTDETPAILARLAALDPRLVVIRKEN AGIVEARNTALSHAEAEFIACLDADDISLPNRLELTLNYLRAHPECIAVGGRVQHIDETGKPLPGVDQPADPEGARVDTI PARDPYIIHSTLMTRRAEVEAVGRYRHVPYSEDTDLFWRLGERGRLVILPEILTLYRVHTASVSSTLHNGRVMAVGCQLG ARSAARRRAGRPDIAFSKAAYETLKKQPGLEQMVASVSVNFDEADEKHFRMAVAVKLMEMTRMRPFEPDRADCAYIRDAW QYAGRLDTENRNQFSWYLTVTAARLIRVGRLGDALALLPPRFLPIAFARFVKGQG >Mature_374_residues PRPPKLADQAEYPMATIDILMPAYNAAATIEAAVESLRAQTVSDFRIIIIDDGSTDETPAILARLAALDPRLVVIRKENA GIVEARNTALSHAEAEFIACLDADDISLPNRLELTLNYLRAHPECIAVGGRVQHIDETGKPLPGVDQPADPEGARVDTIP ARDPYIIHSTLMTRRAEVEAVGRYRHVPYSEDTDLFWRLGERGRLVILPEILTLYRVHTASVSSTLHNGRVMAVGCQLGA RSAARRRAGRPDIAFSKAAYETLKKQPGLEQMVASVSVNFDEADEKHFRMAVAVKLMEMTRMRPFEPDRADCAYIRDAWQ YAGRLDTENRNQFSWYLTVTAARLIRVGRLGDALALLPPRFLPIAFARFVKGQG
Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=97, Percent_Identity=36.0824742268041, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1787259, Length=206, Percent_Identity=27.6699029126214, Blast_Score=65, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 41652; Mature: 41521
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPPKLADQAEYPMATIDILMPAYNAAATIEAAVESLRAQTVSDFRIIIIDDGSTDETP CCCCCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHH AILARLAALDPRLVVIRKENAGIVEARNTALSHAEAEFIACLDADDISLPNRLELTLNYL HHHHHHHHCCCEEEEEEECCCCEEEECHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHH RAHPECIAVGGRVQHIDETGKPLPGVDQPADPEGARVDTIPARDPYIIHSTLMTRRAEVE HCCCCEEEECCEEEECHHCCCCCCCCCCCCCCCCCEECCCCCCCCEEEHHHHHHHHHHHH AVGRYRHVPYSEDTDLFWRLGERGRLVILPEILTLYRVHTASVSSTLHNGRVMAVGCQLG HHHHEECCCCCCCCHHHEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC ARSAARRRAGRPDIAFSKAAYETLKKQPGLEQMVASVSVNFDEADEKHFRMAVAVKLMEM CHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH TRMRPFEPDRADCAYIRDAWQYAGRLDTENRNQFSWYLTVTAARLIRVGRLGDALALLPP HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHCCCCHHHHCCC RFLPIAFARFVKGQG HHHHHHHHHHHCCCC >Mature Secondary Structure PRPPKLADQAEYPMATIDILMPAYNAAATIEAAVESLRAQTVSDFRIIIIDDGSTDETP CCCCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHH AILARLAALDPRLVVIRKENAGIVEARNTALSHAEAEFIACLDADDISLPNRLELTLNYL HHHHHHHHCCCEEEEEEECCCCEEEECHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHH RAHPECIAVGGRVQHIDETGKPLPGVDQPADPEGARVDTIPARDPYIIHSTLMTRRAEVE HCCCCEEEECCEEEECHHCCCCCCCCCCCCCCCCCEECCCCCCCCEEEHHHHHHHHHHHH AVGRYRHVPYSEDTDLFWRLGERGRLVILPEILTLYRVHTASVSSTLHNGRVMAVGCQLG HHHHEECCCCCCCCHHHEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC ARSAARRRAGRPDIAFSKAAYETLKKQPGLEQMVASVSVNFDEADEKHFRMAVAVKLMEM CHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH TRMRPFEPDRADCAYIRDAWQYAGRLDTENRNQFSWYLTVTAARLIRVGRLGDALALLPP HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHCCCCHHHHCCC RFLPIAFARFVKGQG HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7596293 [H]