Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114799180

Identifier: 114799180

GI number: 114799180

Start: 424065

End: 426581

Strand: Reverse

Name: 114799180

Synonym: HNE_0427

Alternate gene names: NA

Gene position: 426581-424065 (Counterclockwise)

Preceding gene: 114797728

Following gene: 114800336

Centisome position: 11.51

GC content: 65.63

Gene sequence:

>2517_bases
ATGAAACCTGCTGCACTTCTCGCCGCCTTGTGCCTGCTGCTCACCGGCCCCGCCCTGGCGCAGGATAAGGCCGAAGCGCC
GCCCTCGCTTGAGGCGCGCATCGAAACACTGGAAGCCCGGCCCGGATTTCTGAACCTCTATGTCGATCCTGCCAGCGGCA
AGGTGCTCGCCGCCCTGCCCCCGCCAGACGCAGATGGCGTCTCGGTCCGCTTTATCTATTCCACCGGGCTGACGGCCGGG
CTCGGCTCCAACCCTATTGGCCTGGACCGGGGCAACGCTTCTTCGGGCGACATCCTTCGCTTCCGCAAGATCGGGGACAA
GGTCGTCGCCGAGGCGGAGAACTGGAAATACCGCGCCACATCGGGGCGGCGCGATGAGGAACGCTCCGTACAGCAGAGCT
TTGCCAACGCCTTCCTCTGGTCCACAGGCATCGAGGCGACCGGCGCAGACGGCGCGCTGCTGATCGACCTGTCAGGCTTC
CTGACGCGGGACGCAGCCGACATTGCCAGCGCGCTGAAGCATGGCAAGGACGCGGGCGAGTATCGCCTGGCCGCAGACCG
CTCGATGCCCGACCCTGCCAGCGCCCTCTCCTTCCCCGACAATGCCGAGATTGACGCCTTCCTGACCTTCGAGACGTCCA
AGCCGAATGCCCAGACCTATGCCACCGCCGCCGATGCGCGCGCGGTGACGCTGGTGCTGCACCATTCCTTCGTGCGCCTG
CCCGATGACGCCTACACGCCGCGCCTGTTTGACCAGCGCACGGCCAGCATCGGCATGGGCTTCCATGACTTCTCCGCGCC
GCTGGGCGCACCGCTCGTCTCGCGCTTCTCGCCGCGCATGCGGCTGGAGCGGGTGAACCCCGCCGCCGCCTCCGGCCCGG
TAAAGGAACCGATCGTCTTCTATGTGGACAATGGCGCGCCGGAGGAAATCCGCGACGCGCTGATCGAAGGGGCCGCCTGG
TGGGCGCAGGGCTTTGAAGCGGCGGGCTTTGAGGAGGCTTACCGGGTGGAGGTTCTCCCCGAAGGCGCCCACCCGCTCGA
CGTGCGCTACAACGTCATCAACTGGGTGCATCGCCAGACGCGCGGCTGGTCCTATGGCGGCAGCGTGATGGACCCGCGCA
CGGGCGAGATCCTGAAGGCCAATGTCATCCTCGGATCGCAGCGGGTGCGCCAGGACCGGATGATCTTTGAGGGGCTTGCG
GGCGCCGCGAAGACCGGCACAGGCGCAGCCGATGATCCGGTGGAGGTGTCGCTGGCGCGCATTCGTCAGCTGTCCGCCCA
TGAGGTGGGCCACACCCTTGGGTTTGCACACAATTTTGCCGCCAGCACGAATGACCGGGCCTCGGTGATGGATTACCCGG
CGCCCTATGTGCGCCCGGCCTCTGGCGGCGGGCTCGACTTTAGAAATGCTTATGCCACCGGCCTGGGCGCCTGGGACGTG
TTTACGGTGAAATGGCTTTACGGCCAGTTCCCCGAAGGCGGGGATAACCTGCCCGCGCTCAACGCGCTGGTGGATGAAGC
CTATGGGGCGGGCCTGCGCTTTGTTTCGGACGATCATGCCCGCAGCAAGGACACAGGACACCCCTTCGGCGCGGTCTGGG
ACAATGGCGCAGACCCGATTGCGACGCTTGATGAGGTGATGGAAGTCCGCCGGATAGCGCTGGCGAATTTTGGCCCCGGC
GCGCTGGCGCAGGGGCGGCCAATGTCTGAGCTGAACGCTGTGATCGTGCCGATCTATCTTTACCATCGCTATCAGGTGGA
GGCGGCCGCCAAGAGCCTCGGGGGACTGAACTTCCGGTATCAGGTGAGGGGAGAAGGCGAGGCGCCGGCCGTTCCGGTGG
CTCCGACTGAGCAGCGCCGGGCGCTGCAAGCCCTTGTAAAGACACTGAAACCTGCTGCGCTTGACCTTTCCGACGCGGCG
CTGAACTACCTGACGCCGGGCGATGTCGGCTATGCGGGCGGCGGCACGATCGAAGAGCTGTTTCCCAACCGGACGGGGCC
GGTGTTCGATCTGGCCGCTTCTGCAGAGATTGCTGCAGGTTTGACGCTTTCGGCGGTGCTCGATCCGGCGCGCGCGAACC
GGCTGGTGGCGTATGCGCAGCGCAGCCCGGAGGCCCTGACACTGAAGGATGTGATCGGTACACTGGAAGCGGCTGTTTTT
GTTGAAGAAAAAAGCCCGCGGCTGGCCGCGCTCGGCCAGATTGTCCAGACGCAGTTTGTGGCTGAGCTGATTTCCCTGTC
CCGCAACGAGACCGCGTCAGCCTCCGTCAAAGCCGTGACAGATGGCTACCTTTCCGGGCTACAAACGCGCCTTGCGAAGA
CAAAATCAGGACAAATCGGGACATATCAGGACACTTCGCGCGCCCTGGCGGACATGATCGGCAAACATCTGGCGGGCGAC
GACCTGCCCGCCTCTATCCTGCGCCCCGCGCCCCCTGCCCCCGCCGGCGCGCCCATCGGAAGCATGACCGGCGCGATGGG
GCAGATGGAAGACTGCTGGCACTGCCCGGCGGAGTAG

Upstream 100 bases:

>100_bases
ACACCCCCGCCATGGCAAAACTTTGCGTCTGCTTCGTTGCTCTCGGCGGCTGGATGGCTTTAATCGCGCCAGATGCTGAT
GCGATCCGGGGGCCTTTGCC

Downstream 100 bases:

>100_bases
GCGCAGGCTTATCCCGTGGATAAGGCCGCTCAGCCAGGCGCAATGCCCAGCGCGCGGACGGATTGCCAGACATCGTCGAC
TGACAGCTCTTTGAGGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 838; Mature: 838

Protein sequence:

>838_residues
MKPAALLAALCLLLTGPALAQDKAEAPPSLEARIETLEARPGFLNLYVDPASGKVLAALPPPDADGVSVRFIYSTGLTAG
LGSNPIGLDRGNASSGDILRFRKIGDKVVAEAENWKYRATSGRRDEERSVQQSFANAFLWSTGIEATGADGALLIDLSGF
LTRDAADIASALKHGKDAGEYRLAADRSMPDPASALSFPDNAEIDAFLTFETSKPNAQTYATAADARAVTLVLHHSFVRL
PDDAYTPRLFDQRTASIGMGFHDFSAPLGAPLVSRFSPRMRLERVNPAAASGPVKEPIVFYVDNGAPEEIRDALIEGAAW
WAQGFEAAGFEEAYRVEVLPEGAHPLDVRYNVINWVHRQTRGWSYGGSVMDPRTGEILKANVILGSQRVRQDRMIFEGLA
GAAKTGTGAADDPVEVSLARIRQLSAHEVGHTLGFAHNFAASTNDRASVMDYPAPYVRPASGGGLDFRNAYATGLGAWDV
FTVKWLYGQFPEGGDNLPALNALVDEAYGAGLRFVSDDHARSKDTGHPFGAVWDNGADPIATLDEVMEVRRIALANFGPG
ALAQGRPMSELNAVIVPIYLYHRYQVEAAAKSLGGLNFRYQVRGEGEAPAVPVAPTEQRRALQALVKTLKPAALDLSDAA
LNYLTPGDVGYAGGGTIEELFPNRTGPVFDLAASAEIAAGLTLSAVLDPARANRLVAYAQRSPEALTLKDVIGTLEAAVF
VEEKSPRLAALGQIVQTQFVAELISLSRNETASASVKAVTDGYLSGLQTRLAKTKSGQIGTYQDTSRALADMIGKHLAGD
DLPASILRPAPPAPAGAPIGSMTGAMGQMEDCWHCPAE

Sequences:

>Translated_838_residues
MKPAALLAALCLLLTGPALAQDKAEAPPSLEARIETLEARPGFLNLYVDPASGKVLAALPPPDADGVSVRFIYSTGLTAG
LGSNPIGLDRGNASSGDILRFRKIGDKVVAEAENWKYRATSGRRDEERSVQQSFANAFLWSTGIEATGADGALLIDLSGF
LTRDAADIASALKHGKDAGEYRLAADRSMPDPASALSFPDNAEIDAFLTFETSKPNAQTYATAADARAVTLVLHHSFVRL
PDDAYTPRLFDQRTASIGMGFHDFSAPLGAPLVSRFSPRMRLERVNPAAASGPVKEPIVFYVDNGAPEEIRDALIEGAAW
WAQGFEAAGFEEAYRVEVLPEGAHPLDVRYNVINWVHRQTRGWSYGGSVMDPRTGEILKANVILGSQRVRQDRMIFEGLA
GAAKTGTGAADDPVEVSLARIRQLSAHEVGHTLGFAHNFAASTNDRASVMDYPAPYVRPASGGGLDFRNAYATGLGAWDV
FTVKWLYGQFPEGGDNLPALNALVDEAYGAGLRFVSDDHARSKDTGHPFGAVWDNGADPIATLDEVMEVRRIALANFGPG
ALAQGRPMSELNAVIVPIYLYHRYQVEAAAKSLGGLNFRYQVRGEGEAPAVPVAPTEQRRALQALVKTLKPAALDLSDAA
LNYLTPGDVGYAGGGTIEELFPNRTGPVFDLAASAEIAAGLTLSAVLDPARANRLVAYAQRSPEALTLKDVIGTLEAAVF
VEEKSPRLAALGQIVQTQFVAELISLSRNETASASVKAVTDGYLSGLQTRLAKTKSGQIGTYQDTSRALADMIGKHLAGD
DLPASILRPAPPAPAGAPIGSMTGAMGQMEDCWHCPAE
>Mature_838_residues
MKPAALLAALCLLLTGPALAQDKAEAPPSLEARIETLEARPGFLNLYVDPASGKVLAALPPPDADGVSVRFIYSTGLTAG
LGSNPIGLDRGNASSGDILRFRKIGDKVVAEAENWKYRATSGRRDEERSVQQSFANAFLWSTGIEATGADGALLIDLSGF
LTRDAADIASALKHGKDAGEYRLAADRSMPDPASALSFPDNAEIDAFLTFETSKPNAQTYATAADARAVTLVLHHSFVRL
PDDAYTPRLFDQRTASIGMGFHDFSAPLGAPLVSRFSPRMRLERVNPAAASGPVKEPIVFYVDNGAPEEIRDALIEGAAW
WAQGFEAAGFEEAYRVEVLPEGAHPLDVRYNVINWVHRQTRGWSYGGSVMDPRTGEILKANVILGSQRVRQDRMIFEGLA
GAAKTGTGAADDPVEVSLARIRQLSAHEVGHTLGFAHNFAASTNDRASVMDYPAPYVRPASGGGLDFRNAYATGLGAWDV
FTVKWLYGQFPEGGDNLPALNALVDEAYGAGLRFVSDDHARSKDTGHPFGAVWDNGADPIATLDEVMEVRRIALANFGPG
ALAQGRPMSELNAVIVPIYLYHRYQVEAAAKSLGGLNFRYQVRGEGEAPAVPVAPTEQRRALQALVKTLKPAALDLSDAA
LNYLTPGDVGYAGGGTIEELFPNRTGPVFDLAASAEIAAGLTLSAVLDPARANRLVAYAQRSPEALTLKDVIGTLEAAVF
VEEKSPRLAALGQIVQTQFVAELISLSRNETASASVKAVTDGYLSGLQTRLAKTKSGQIGTYQDTSRALADMIGKHLAGD
DLPASILRPAPPAPAGAPIGSMTGAMGQMEDCWHCPAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89087; Mature: 89087

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAALLAALCLLLTGPALAQDKAEAPPSLEARIETLEARPGFLNLYVDPASGKVLAALP
CCHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEECC
PPDADGVSVRFIYSTGLTAGLGSNPIGLDRGNASSGDILRFRKIGDKVVAEAENWKYRAT
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHCHHHHHHCCCCEEECC
SGRRDEERSVQQSFANAFLWSTGIEATGADGALLIDLSGFLTRDAADIASALKHGKDAGE
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHCCHHHHHHHHHCCCCCCC
YRLAADRSMPDPASALSFPDNAEIDAFLTFETSKPNAQTYATAADARAVTLVLHHSFVRL
EEEECCCCCCCCHHHCCCCCCCCEEEEEEEECCCCCCHHEEECCCCCEEEEEEEHHHHCC
PDDAYTPRLFDQRTASIGMGFHDFSAPLGAPLVSRFSPRMRLERVNPAAASGPVKEPIVF
CCCCCCCCHHHHHHHHHCCCCHHHCCCCCCHHHHHCCCCHHHHHCCCCCCCCCCCCCEEE
YVDNGAPEEIRDALIEGAAWWAQGFEAAGFEEAYRVEVLPEGAHPLDVRYNVINWVHRQT
EECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHC
RGWSYGGSVMDPRTGEILKANVILGSQRVRQDRMIFEGLAGAAKTGTGAADDPVEVSLAR
CCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
IRQLSAHEVGHTLGFAHNFAASTNDRASVMDYPAPYVRPASGGGLDFRNAYATGLGAWDV
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEECCCCCCCCCHHHHHCCCCCHHH
FTVKWLYGQFPEGGDNLPALNALVDEAYGAGLRFVSDDHARSKDTGHPFGAVWDNGADPI
EEEEEHHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHH
ATLDEVMEVRRIALANFGPGALAQGRPMSELNAVIVPIYLYHRYQVEAAAKSLGGLNFRY
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCEEEEEEEEEHHHHHHHHHHHHCCCCEEE
QVRGEGEAPAVPVAPTEQRRALQALVKTLKPAALDLSDAALNYLTPGDVGYAGGGTIEEL
EEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHH
FPNRTGPVFDLAASAEIAAGLTLSAVLDPARANRLVAYAQRSPEALTLKDVIGTLEAAVF
CCCCCCCEEEECCCCHHHCCCCHHHHHCHHHHCCEEEEECCCCCEEEHHHHHHHHHHEEE
VEEKSPRLAALGQIVQTQFVAELISLSRNETASASVKAVTDGYLSGLQTRLAKTKSGQIG
EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
TYQDTSRALADMIGKHLAGDDLPASILRPAPPAPAGAPIGSMTGAMGQMEDCWHCPAE
CCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHCCCCC
>Mature Secondary Structure
MKPAALLAALCLLLTGPALAQDKAEAPPSLEARIETLEARPGFLNLYVDPASGKVLAALP
CCHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEECC
PPDADGVSVRFIYSTGLTAGLGSNPIGLDRGNASSGDILRFRKIGDKVVAEAENWKYRAT
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHCHHHHHHCCCCEEECC
SGRRDEERSVQQSFANAFLWSTGIEATGADGALLIDLSGFLTRDAADIASALKHGKDAGE
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHCCHHHHHHHHHCCCCCCC
YRLAADRSMPDPASALSFPDNAEIDAFLTFETSKPNAQTYATAADARAVTLVLHHSFVRL
EEEECCCCCCCCHHHCCCCCCCCEEEEEEEECCCCCCHHEEECCCCCEEEEEEEHHHHCC
PDDAYTPRLFDQRTASIGMGFHDFSAPLGAPLVSRFSPRMRLERVNPAAASGPVKEPIVF
CCCCCCCCHHHHHHHHHCCCCHHHCCCCCCHHHHHCCCCHHHHHCCCCCCCCCCCCCEEE
YVDNGAPEEIRDALIEGAAWWAQGFEAAGFEEAYRVEVLPEGAHPLDVRYNVINWVHRQT
EECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHC
RGWSYGGSVMDPRTGEILKANVILGSQRVRQDRMIFEGLAGAAKTGTGAADDPVEVSLAR
CCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
IRQLSAHEVGHTLGFAHNFAASTNDRASVMDYPAPYVRPASGGGLDFRNAYATGLGAWDV
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEECCCCCCCCCHHHHHCCCCCHHH
FTVKWLYGQFPEGGDNLPALNALVDEAYGAGLRFVSDDHARSKDTGHPFGAVWDNGADPI
EEEEEHHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHH
ATLDEVMEVRRIALANFGPGALAQGRPMSELNAVIVPIYLYHRYQVEAAAKSLGGLNFRY
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCEEEEEEEEEHHHHHHHHHHHHCCCCEEE
QVRGEGEAPAVPVAPTEQRRALQALVKTLKPAALDLSDAALNYLTPGDVGYAGGGTIEEL
EEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHH
FPNRTGPVFDLAASAEIAAGLTLSAVLDPARANRLVAYAQRSPEALTLKDVIGTLEAAVF
CCCCCCCEEEECCCCHHHCCCCHHHHHCHHHHCCEEEEECCCCCEEEHHHHHHHHHHEEE
VEEKSPRLAALGQIVQTQFVAELISLSRNETASASVKAVTDGYLSGLQTRLAKTKSGQIG
EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
TYQDTSRALADMIGKHLAGDDLPASILRPAPPAPAGAPIGSMTGAMGQMEDCWHCPAE
CCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA