Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is dnaA [C]

Identifier: 114799179

GI number: 114799179

Start: 751990

End: 752334

Strand: Direct

Name: dnaA [C]

Synonym: HNE_0741

Alternate gene names: 114799179

Gene position: 751990-752334 (Clockwise)

Preceding gene: 114797666

Following gene: 114800191

Centisome position: 20.3

GC content: 60.87

Gene sequence:

>345_bases
ATGGCGGAGTTCAATCCCCAGAGAGATGAAGACAGGGCCTACCTGGCAGGCGCCCTGGTGGCGTATGCGCTTGGCCTGAA
ATCAGAGGCAGTTCTGTCCGTTGAGCGTGGAAACCCGGTGCACGCCCGTGCCCGGCATATCGCGATGTATCTGACACATA
CCGGCTGTGGGATGAGCCTTTCTCGCGTCGCCCGTGCTTTCGGCCGAGACCGGTCGACCGTTTCTCATGCCTGCCGCATC
ATCGAAGACTATCGGGAAGATCCTGACTTCGACACATGGCTCGAACAGCTCTCCAGCGGCTTGCGGTCCGTCGCGTTATT
GGGCGTTGCGGAGGCCACGGCATGA

Upstream 100 bases:

>100_bases
CCCCAACGTTTTCAGGCCAGTTGCTTGCTGAAATAGGAAAGTTATCCTACACCTCTCCATCTCGGGTATGGTTTCGCCAT
AACCCGAAGAGGAGTGGTGA

Downstream 100 bases:

>100_bases
GCGGGGCAAATCTGCGGCCGCTCAGTGAGGCGCAGGTTCTCCGTGTGCTGGCATCAGGCGGCATGTTGGTCGCCGCGGGC
AGTCACTGGCGCGCCTATCG

Product: DnaA domain-containing protein

Products: NA

Alternate protein names: ATPase Involved In DNA Replication Initiation; ATPase; Chromosomal Replication Initiator DNAA Domain; DNAA Domain-Containing Protein

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MAEFNPQRDEDRAYLAGALVAYALGLKSEAVLSVERGNPVHARARHIAMYLTHTGCGMSLSRVARAFGRDRSTVSHACRI
IEDYREDPDFDTWLEQLSSGLRSVALLGVAEATA

Sequences:

>Translated_114_residues
MAEFNPQRDEDRAYLAGALVAYALGLKSEAVLSVERGNPVHARARHIAMYLTHTGCGMSLSRVARAFGRDRSTVSHACRI
IEDYREDPDFDTWLEQLSSGLRSVALLGVAEATA
>Mature_113_residues
AEFNPQRDEDRAYLAGALVAYALGLKSEAVLSVERGNPVHARARHIAMYLTHTGCGMSLSRVARAFGRDRSTVSHACRII
EDYREDPDFDTWLEQLSSGLRSVALLGVAEATA

Specific function: Plays An Important Role In The Initiation And Regulation Of Chromosomal Replication. Binds To The Origin Of Replication; It Binds Specifically Double-Stranded DNA At A 9 Bp Consensus (Dnaa Box): 5'-TTATC[Ca]A[Ca]A-3'. Dnaa Binds To ATP And To Acidic Phosp

COG id: COG0593

COG function: function code L; ATPase involved in DNA replication initiation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12508; Mature: 12377

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEFNPQRDEDRAYLAGALVAYALGLKSEAVLSVERGNPVHARARHIAMYLTHTGCGMSL
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCH
SRVARAFGRDRSTVSHACRIIEDYREDPDFDTWLEQLSSGLRSVALLGVAEATA
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AEFNPQRDEDRAYLAGALVAYALGLKSEAVLSVERGNPVHARARHIAMYLTHTGCGMSL
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCH
SRVARAFGRDRSTVSHACRIIEDYREDPDFDTWLEQLSSGLRSVALLGVAEATA
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA