Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is attM [H]

Identifier: 114799156

GI number: 114799156

Start: 3521600

End: 3522505

Strand: Direct

Name: attM [H]

Synonym: HNE_3377

Alternate gene names: 114799156

Gene position: 3521600-3522505 (Clockwise)

Preceding gene: 114797571

Following gene: 114798760

Centisome position: 95.05

GC content: 62.25

Gene sequence:

>906_bases
ATGCGTCTGCGACACACCCTGAAACCGCTGCTGCTCGCCAGCTCTGCTGCTGTCATTCTCGCGGCCTGCGCGCCCGCCGC
AGAAGACACGCCTCCACCGGAAGCCCCTGCCGAAGAAGTGGCTGAAGCGAGCCCGGCCCCTGCCCCGGTCCTGACCGTCG
ATGTGCTCGACTGCGGCACCATCGGTGTCTCGGATCTCGACGCCTTCTCCTCGGCGGGCGACTTCGCCGGCCAAAGCGAC
GAATTCACCAACACCTGTTATCTGGTCAATCACCCCGACGGGCGCCTGCTCTGGGATCTCGGCCTGCCGTCGCAGCTGGT
GGGGCAACCGCCCTTCACGCAGCAGATATTCACGGTCTCGGTGGAGAAGTCGATCACCGAGCAACTCGCCGATCTCGGCG
TCGTTCCCTCGGAACTCTCCTATGTCTCCATTTCGCATTCCCACTTCGACCATATCGGACAGGTCGATCAGGTTCAGGGC
GCAACCTGGCTGGTCAACCAGACAGAATATGACGCGATGTTCCCGGCCGATGGTGCCCCGCCGGCCGACCCCAGCCTGAC
GGAAAACTATGCCCTGTTCAAACCGATGGAAACTCAGATCATCGAGGATAGGCACGACGTGTTCGGAGATGGCAGCGTCG
TCATCTTCAAGACCCCAGGTCATACGCCGGGCCATGCCTCGCTTCAGCTCACGCTTCCGGAATCGGGTCCCGTCCTGCTG
ACGGGCGATCTGTATCACCGCACCGAAAGCCGGGCACTCTCCCGTGTCCCGCGCTTCAATACGAGCGAAGAAGAAACGCT
GGCCTCCATGGCAACGTTCGAAACGCGCGCCACCGATCTTGAAGCCAAGGTCGTCATCCAGCACGAGCCCGATGATGTCG
TGCCGCTCGGCGGGATTATTCGCTAG

Upstream 100 bases:

>100_bases
CACACCCACCGGGAAAGCTGCTTCTATCGGCGCATCGAAGGCGGGGTGCTATCCTTCACCGGCAAGGCAGATTAGGCTCC
TCCAAAACCGGAGGAACCCC

Downstream 100 bases:

>100_bases
CTTCGACTTCCGGCTCGGCAGAGGCGATGACGGGCCGGATGAAGATCTGGTCTTCCCGCGCGGCAAACTCGCCGCGCCGG
AATTCCCCGATCACGGCGGC

Product: metallo-beta-lactamase family lipoprotein

Products: NA

Alternate protein names: AHL-lactonase AttM [H]

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MRLRHTLKPLLLASSAAVILAACAPAAEDTPPPEAPAEEVAEASPAPAPVLTVDVLDCGTIGVSDLDAFSSAGDFAGQSD
EFTNTCYLVNHPDGRLLWDLGLPSQLVGQPPFTQQIFTVSVEKSITEQLADLGVVPSELSYVSISHSHFDHIGQVDQVQG
ATWLVNQTEYDAMFPADGAPPADPSLTENYALFKPMETQIIEDRHDVFGDGSVVIFKTPGHTPGHASLQLTLPESGPVLL
TGDLYHRTESRALSRVPRFNTSEEETLASMATFETRATDLEAKVVIQHEPDDVVPLGGIIR

Sequences:

>Translated_301_residues
MRLRHTLKPLLLASSAAVILAACAPAAEDTPPPEAPAEEVAEASPAPAPVLTVDVLDCGTIGVSDLDAFSSAGDFAGQSD
EFTNTCYLVNHPDGRLLWDLGLPSQLVGQPPFTQQIFTVSVEKSITEQLADLGVVPSELSYVSISHSHFDHIGQVDQVQG
ATWLVNQTEYDAMFPADGAPPADPSLTENYALFKPMETQIIEDRHDVFGDGSVVIFKTPGHTPGHASLQLTLPESGPVLL
TGDLYHRTESRALSRVPRFNTSEEETLASMATFETRATDLEAKVVIQHEPDDVVPLGGIIR
>Mature_301_residues
MRLRHTLKPLLLASSAAVILAACAPAAEDTPPPEAPAEEVAEASPAPAPVLTVDVLDCGTIGVSDLDAFSSAGDFAGQSD
EFTNTCYLVNHPDGRLLWDLGLPSQLVGQPPFTQQIFTVSVEKSITEQLADLGVVPSELSYVSISHSHFDHIGQVDQVQG
ATWLVNQTEYDAMFPADGAPPADPSLTENYALFKPMETQIIEDRHDVFGDGSVVIFKTPGHTPGHASLQLTLPESGPVLL
TGDLYHRTESRALSRVPRFNTSEEETLASMATFETRATDLEAKVVIQHEPDDVVPLGGIIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: =3.1.1.81 [H]

Molecular weight: Translated: 32274; Mature: 32274

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRHTLKPLLLASSAAVILAACAPAAEDTPPPEAPAEEVAEASPAPAPVLTVDVLDCGT
CCCHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCC
IGVSDLDAFSSAGDFAGQSDEFTNTCYLVNHPDGRLLWDLGLPSQLVGQPPFTQQIFTVS
CCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCHHHHCCCCCCCEEEEEE
VEKSITEQLADLGVVPSELSYVSISHSHFDHIGQVDQVQGATWLVNQTEYDAMFPADGAP
HHHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCCHHHCCCCEEEEECCCCCEECCCCCCC
PADPSLTENYALFKPMETQIIEDRHDVFGDGSVVIFKTPGHTPGHASLQLTLPESGPVLL
CCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEE
TGDLYHRTESRALSRVPRFNTSEEETLASMATFETRATDLEAKVVIQHEPDDVVPLGGII
ECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEECCCCCC
R
C
>Mature Secondary Structure
MRLRHTLKPLLLASSAAVILAACAPAAEDTPPPEAPAEEVAEASPAPAPVLTVDVLDCGT
CCCHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCC
IGVSDLDAFSSAGDFAGQSDEFTNTCYLVNHPDGRLLWDLGLPSQLVGQPPFTQQIFTVS
CCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCHHHHCCCCCCCEEEEEE
VEKSITEQLADLGVVPSELSYVSISHSHFDHIGQVDQVQGATWLVNQTEYDAMFPADGAP
HHHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCCHHHCCCCEEEEECCCCCEECCCCCCC
PADPSLTENYALFKPMETQIIEDRHDVFGDGSVVIFKTPGHTPGHASLQLTLPESGPVLL
CCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEE
TGDLYHRTESRALSRVPRFNTSEEETLASMATFETRATDLEAKVVIQHEPDDVVPLGGII
ECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEECCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA