| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is murB
Identifier: 114799112
GI number: 114799112
Start: 391893
End: 392864
Strand: Reverse
Name: murB
Synonym: HNE_0397
Alternate gene names: 114799112
Gene position: 392864-391893 (Counterclockwise)
Preceding gene: 114800549
Following gene: 114799909
Centisome position: 10.6
GC content: 68.21
Gene sequence:
>972_bases ATGACCCCCACATCCCCCTCTCCCGATCTGCTCCCCACCTTGCCAGACGTGCGCGGCAAGCTGCTGCGCGGGGCGGAGCT TGCGCCTTATACCTGGTTCCGCGTCGGCGGCCCGGCAGACGCCCTCTTCCTGCCCGCCGATGAGGAAGACCTCGAAGCCT TCCTCAAGGCGCTCGACCCCGCCATCCCTGTCACCCCGCTGGGCGTGGGCTCAAACCTCATCGTCCGTGATGGCGGCATT CCCGGTATCGTCATCCGCCTGATGGGCAAATACTGGGGCGAGATCGAAGCCCTTGACGGCATCACGCTCACCGCCCGCGC CGGCGCGCTCGATCTTGCCGTCGCCAAAGCGGCGGCCGCCAACGGCATCACGGGCCTCGAATTCCTCTCCGGCATTCCCG GCTCGCTGGGCGGGGCCACCCGCACCAATGCCGGCTGCTATGGCAGCGAGCTACGCGACCGCCTCGTCGCCCTGCATGGC TTCCGCCGCGATGGCAGCCGCGTCGCCTATCGCGGCCCCGGCAAGCCCGGCGCCCTGCCCGAGGCCCACTTCTCCTATCG CCATACCGATTTGCCAGACGACCTGATCGTCACCCGCCTCATCCTGGAAGGCACCGGCGCTGGCGACCCCGAAGCGATCA GCGCAGACATCGCCGCCCTTCAGGCCCGCCGCGCGCAAACCCAGCCCATAAAAGAAAAAACCTCCGGCTCCACCTTCGCT AATCCCGACCCTCCGGGCACGCCCGATCAGCGCTCCGCCTGGAAACTGATCGACGCCGCCGGCTGCCGCGGCCTGAAAGT CGGCGGCGCGCAGGTCTCGCCCCTGCATTGCAACTTCCTGATCAACACGGGCGACGCCACCGCCGCCGACCTCGAAGCCC TCGGCGAACTGGTCCGGGCAAGGGTGCTGGAAAATTCAGGCGTGGAACTCCGCTGGGAAGTCCGCCGCATGGGACGTGTG CAGAGGGTCTAG
Upstream 100 bases:
>100_bases CGGGCCTCAGCGCTGAGGCCCTGCCCCCGGCGGCTGACTCGGTGGCTGGCCCGGCAGCTGGCTTGACAGGGCGCGCGGTT GCAGGAAACCCGTTGCAGCC
Downstream 100 bases:
>100_bases GGGGCGGAGAGCAACCCATCCCGTAGGGCGGGTTAGCCGAAGGCGTAACCCGCCATCTCAATCCCAAACGGTGCGTATCG CTCCACTCAATCCACCCTAC
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTPTSPSPDLLPTLPDVRGKLLRGAELAPYTWFRVGGPADALFLPADEEDLEAFLKALDPAIPVTPLGVGSNLIVRDGGI PGIVIRLMGKYWGEIEALDGITLTARAGALDLAVAKAAAANGITGLEFLSGIPGSLGGATRTNAGCYGSELRDRLVALHG FRRDGSRVAYRGPGKPGALPEAHFSYRHTDLPDDLIVTRLILEGTGAGDPEAISADIAALQARRAQTQPIKEKTSGSTFA NPDPPGTPDQRSAWKLIDAAGCRGLKVGGAQVSPLHCNFLINTGDATAADLEALGELVRARVLENSGVELRWEVRRMGRV QRV
Sequences:
>Translated_323_residues MTPTSPSPDLLPTLPDVRGKLLRGAELAPYTWFRVGGPADALFLPADEEDLEAFLKALDPAIPVTPLGVGSNLIVRDGGI PGIVIRLMGKYWGEIEALDGITLTARAGALDLAVAKAAAANGITGLEFLSGIPGSLGGATRTNAGCYGSELRDRLVALHG FRRDGSRVAYRGPGKPGALPEAHFSYRHTDLPDDLIVTRLILEGTGAGDPEAISADIAALQARRAQTQPIKEKTSGSTFA NPDPPGTPDQRSAWKLIDAAGCRGLKVGGAQVSPLHCNFLINTGDATAADLEALGELVRARVLENSGVELRWEVRRMGRV QRV >Mature_322_residues TPTSPSPDLLPTLPDVRGKLLRGAELAPYTWFRVGGPADALFLPADEEDLEAFLKALDPAIPVTPLGVGSNLIVRDGGIP GIVIRLMGKYWGEIEALDGITLTARAGALDLAVAKAAAANGITGLEFLSGIPGSLGGATRTNAGCYGSELRDRLVALHGF RRDGSRVAYRGPGKPGALPEAHFSYRHTDLPDDLIVTRLILEGTGAGDPEAISADIAALQARRAQTQPIKEKTSGSTFAN PDPPGTPDQRSAWKLIDAAGCRGLKVGGAQVSPLHCNFLINTGDATAADLEALGELVRARVLENSGVELRWEVRRMGRVQ RV
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_HYPNA (Q0C566)
Other databases:
- EMBL: CP000158 - RefSeq: YP_759127.1 - ProteinModelPortal: Q0C566 - SMR: Q0C566 - STRING: Q0C566 - GeneID: 4289907 - GenomeReviews: CP000158_GR - KEGG: hne:HNE_0397 - NMPDR: fig|228405.5.peg.389 - TIGR: HNE_0397 - eggNOG: COG0812 - HOGENOM: HBG686573 - OMA: ISERHAN - BioCyc: HNEP81032:HNE_0397-MONOMER - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.30.43.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 34020; Mature: 33889
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS51387 FAD_PCMH
Important sites: ACT_SITE 187-187 ACT_SITE 237-237 ACT_SITE 313-313
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTSPSPDLLPTLPDVRGKLLRGAELAPYTWFRVGGPADALFLPADEEDLEAFLKALDP CCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHCC AIPVTPLGVGSNLIVRDGGIPGIVIRLMGKYWGEIEALDGITLTARAGALDLAVAKAAAA CCCCEECCCCCEEEEECCCCCHHHHHHHHHHHCCEECCCCEEEEECCCHHHHHHHHHHHH NGITGLEFLSGIPGSLGGATRTNAGCYGSELRDRLVALHGFRRDGSRVAYRGPGKPGALP CCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC EAHFSYRHTDLPDDLIVTRLILEGTGAGDPEAISADIAALQARRAQTQPIKEKTSGSTFA CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC NPDPPGTPDQRSAWKLIDAAGCRGLKVGGAQVSPLHCNFLINTGDATAADLEALGELVRA CCCCCCCCCCHHHHHHHHHCCCCCEEECCCEECCEEEEEEEECCCCCHHHHHHHHHHHHH RVLENSGVELRWEVRRMGRVQRV HHHHCCCCEEEEHHHHCCHHCCC >Mature Secondary Structure TPTSPSPDLLPTLPDVRGKLLRGAELAPYTWFRVGGPADALFLPADEEDLEAFLKALDP CCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHCC AIPVTPLGVGSNLIVRDGGIPGIVIRLMGKYWGEIEALDGITLTARAGALDLAVAKAAAA CCCCEECCCCCEEEEECCCCCHHHHHHHHHHHCCEECCCCEEEEECCCHHHHHHHHHHHH NGITGLEFLSGIPGSLGGATRTNAGCYGSELRDRLVALHGFRRDGSRVAYRGPGKPGALP CCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC EAHFSYRHTDLPDDLIVTRLILEGTGAGDPEAISADIAALQARRAQTQPIKEKTSGSTFA CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC NPDPPGTPDQRSAWKLIDAAGCRGLKVGGAQVSPLHCNFLINTGDATAADLEALGELVRA CCCCCCCCCCHHHHHHHHHCCCCCEEECCCEECCEEEEEEEECCCCCHHHHHHHHHHHHH RVLENSGVELRWEVRRMGRVQRV HHHHCCCCEEEEHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA