| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799091
Identifier: 114799091
GI number: 114799091
Start: 1019149
End: 1021233
Strand: Direct
Name: 114799091
Synonym: HNE_1008
Alternate gene names: NA
Gene position: 1019149-1021233 (Clockwise)
Preceding gene: 114797686
Following gene: 114798058
Centisome position: 27.51
GC content: 62.3
Gene sequence:
>2085_bases ATGTTGAACCGTTTTGGAGGCGCGTCGCTGGCGGCACTGTTGGTGCTGGGCGCGTGCGCGCATGAAGTGGAGGCGCCCGC ACTGGAAGCCGCCGAAATGGCGCCCCCACCTGCGCCCGTGACCGAGACATGGTCCGTTCGGCTGTTCGATCAGACCCTCG GCCAGCTGGTTGCCACGACTGAGGGCAACACCGTCAAGGTGGATTACGAATACCGCAATAATGGGCGCGGGCCGACGCTG GCGGAGACGATCACACTGGGCGATGACAGCTTGCCGACTGGCTGGACCATTGATGGCGCGACGACCTTCGGCAATGAAAT CCACGAAACCTTTGCGCTGGCCGACGGCGTTGCCAGCTGGACCGACACGACCGGTTCGGCAACCGCCGAGCAGACAGAGC CTGCCATCTATATTCCGCAGAATGCCTCGCCTTATACCCTCGCCATTTATGCCAGGGCGCTGCTGGCCGATGATGACATG ACGCTGCCGGCCTGGCCGGCGGGCAGCCTGACGATGAGTTCGCAGGACAAGTTGCGGATCGAAGGCGCGGGCGGCCCCGT GGCGACGACGGCCTATGCCCTTGTCGGCGATGATGTGGACCCGACTTATTTCCTCACGGATGAAGCGGGCGATCTGTTCG CGCTGATCTCGCCGCGCCTTGTCGTCGTGCGGGAGGGCTATGAAGAGGCCGATGATCAGCTCAAGGAGCTTGCCACGCGG CTATCGACTGAGCGGCTGGAGGCGATCCAGGCAGAAACCGCGCACAGGTTTGATGCGCCGCTGGCGATTACAAATGTCCG CGTCTTTGATCCCAAGGCGAAGGCGATGTCGGCGCTGTCTACCGTGATGGTTGAAGACGGTGTGATTACCGCGGTTACGG CGGGCGATGCGGACACCGCTGGCGCCTATGTGGTGGACGGGCAGGGCGGATCGCTCGTGCCGGGCCTCACGGAAATGCAT GGCCATTTGGGGCAGGACGCGGCGCTGAAGAATATTGCGGCGGGCGTCACGCTGGTGCGCGATATGGGCAACGATAACGG TGTGTTCAGTGAGCTGATCGGCAAGATCGAAGCGGGCACGCTCGCCGGGCCACGTGTCGTCCGCTCCGGTTTCATTGAGG GCAAGAGCCCGTTCAGCTCGAACAACGGCATCCTTGTGAACAGTGAGGAAGAGGCCCTCGCCGCAGTTGATTGGTATGCG GACGAGGGCGATTTCTGGCAGATCAAGGTCTACAATTCGATGACGCCTGCCTGGGTGCCCGCTATTGTGGAGCGTGCCAA GGAACGCGGCCTGAAGGTCAGTGGCCATGTGCCCGCCTTCACCAATGCCGACGCCATGATCGAGGCGGGCTATGACGAGA TGACCCATATTAACCAGCTGATGCTGGGCTGGGTGCTGGCGCCGGAGGAAGACACAAGAACCCTGCTGCGCCTGACTGCG CTTCAGCGGCTCCCGAAGGTGGACCTTGATGGCGCAGCCGTGACCCGCACGCTGGACCTGATGGCTGAGAATGACGTCGC GATTGACCCCACTTACGCGATCCATGAGGCGCTGCTGCTGTCCCGCAATGGTGAGGTGCAGGCAGGCATGGCCGATTATG TCGACCACATGCCCATCGCCGTGCAGCGCGAGGCGCGGGCTGCCTGGTCGGCCATCGGCAGCCCGGAAGAAGACGCCGCC TATAGGGGCGCTTTCGACCAGATCACGGGCACGATCCAGCGGATGAAGGAGCGCGGCATCTTCATCGTCATGGGCACAGA CCTTGGCGGCGCGCTGACGCTGCACCGGGAACTGGAGCTCTATCAGAATGTCGGCTTCACCCCGGCCGAAATCCTCGCCC GCGCCACGCTGGAAGCAGCCGAGTATATGGGGCTGGATGAAGAACTGGGCTCGATCGAGCCAGGCAAGAAGGCAGATTTC CTGCTCGTGCCCGGCAATCCTGTGGAAGACTTCAAGGCGATCAAGACCATCAGCCTCGTTTCAAAGGGTGACACGGTCTA TTTCCCCAGCGAGATCTATCCCTATTTCGGCATCCGGCCTTTCACTGAAATTCCGGCCGTGACGCCGCCATCATCTGCCG ATTAG
Upstream 100 bases:
>100_bases GCGATTTACGGCAGACCTTCCCACCTCCGCCCCAATGTGCCACCAATGCCTCTAAACAGGCCGCGCCCTTATGGTGTAGC GGCAGCAGGGAGGAATTGGG
Downstream 100 bases:
>100_bases TCTAGGCTGCATCACGGAGGAGACGGGGACCATGTCTGAAGACGTCTGGAGAGCCTATTTCGCAGATATGGGCGGACAGC CTGCGGCGATCGTATTCAAC
Product: amidohydrolase family protein
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Amidohydrolase Family; Secreted Amidohydrolase; Amidohydrolase-Family Protein; Endoribonuclease L-PSP; ABC-2 Type Transporter
Number of amino acids: Translated: 694; Mature: 694
Protein sequence:
>694_residues MLNRFGGASLAALLVLGACAHEVEAPALEAAEMAPPPAPVTETWSVRLFDQTLGQLVATTEGNTVKVDYEYRNNGRGPTL AETITLGDDSLPTGWTIDGATTFGNEIHETFALADGVASWTDTTGSATAEQTEPAIYIPQNASPYTLAIYARALLADDDM TLPAWPAGSLTMSSQDKLRIEGAGGPVATTAYALVGDDVDPTYFLTDEAGDLFALISPRLVVVREGYEEADDQLKELATR LSTERLEAIQAETAHRFDAPLAITNVRVFDPKAKAMSALSTVMVEDGVITAVTAGDADTAGAYVVDGQGGSLVPGLTEMH GHLGQDAALKNIAAGVTLVRDMGNDNGVFSELIGKIEAGTLAGPRVVRSGFIEGKSPFSSNNGILVNSEEEALAAVDWYA DEGDFWQIKVYNSMTPAWVPAIVERAKERGLKVSGHVPAFTNADAMIEAGYDEMTHINQLMLGWVLAPEEDTRTLLRLTA LQRLPKVDLDGAAVTRTLDLMAENDVAIDPTYAIHEALLLSRNGEVQAGMADYVDHMPIAVQREARAAWSAIGSPEEDAA YRGAFDQITGTIQRMKERGIFIVMGTDLGGALTLHRELELYQNVGFTPAEILARATLEAAEYMGLDEELGSIEPGKKADF LLVPGNPVEDFKAIKTISLVSKGDTVYFPSEIYPYFGIRPFTEIPAVTPPSSAD
Sequences:
>Translated_694_residues MLNRFGGASLAALLVLGACAHEVEAPALEAAEMAPPPAPVTETWSVRLFDQTLGQLVATTEGNTVKVDYEYRNNGRGPTL AETITLGDDSLPTGWTIDGATTFGNEIHETFALADGVASWTDTTGSATAEQTEPAIYIPQNASPYTLAIYARALLADDDM TLPAWPAGSLTMSSQDKLRIEGAGGPVATTAYALVGDDVDPTYFLTDEAGDLFALISPRLVVVREGYEEADDQLKELATR LSTERLEAIQAETAHRFDAPLAITNVRVFDPKAKAMSALSTVMVEDGVITAVTAGDADTAGAYVVDGQGGSLVPGLTEMH GHLGQDAALKNIAAGVTLVRDMGNDNGVFSELIGKIEAGTLAGPRVVRSGFIEGKSPFSSNNGILVNSEEEALAAVDWYA DEGDFWQIKVYNSMTPAWVPAIVERAKERGLKVSGHVPAFTNADAMIEAGYDEMTHINQLMLGWVLAPEEDTRTLLRLTA LQRLPKVDLDGAAVTRTLDLMAENDVAIDPTYAIHEALLLSRNGEVQAGMADYVDHMPIAVQREARAAWSAIGSPEEDAA YRGAFDQITGTIQRMKERGIFIVMGTDLGGALTLHRELELYQNVGFTPAEILARATLEAAEYMGLDEELGSIEPGKKADF LLVPGNPVEDFKAIKTISLVSKGDTVYFPSEIYPYFGIRPFTEIPAVTPPSSAD >Mature_694_residues MLNRFGGASLAALLVLGACAHEVEAPALEAAEMAPPPAPVTETWSVRLFDQTLGQLVATTEGNTVKVDYEYRNNGRGPTL AETITLGDDSLPTGWTIDGATTFGNEIHETFALADGVASWTDTTGSATAEQTEPAIYIPQNASPYTLAIYARALLADDDM TLPAWPAGSLTMSSQDKLRIEGAGGPVATTAYALVGDDVDPTYFLTDEAGDLFALISPRLVVVREGYEEADDQLKELATR LSTERLEAIQAETAHRFDAPLAITNVRVFDPKAKAMSALSTVMVEDGVITAVTAGDADTAGAYVVDGQGGSLVPGLTEMH GHLGQDAALKNIAAGVTLVRDMGNDNGVFSELIGKIEAGTLAGPRVVRSGFIEGKSPFSSNNGILVNSEEEALAAVDWYA DEGDFWQIKVYNSMTPAWVPAIVERAKERGLKVSGHVPAFTNADAMIEAGYDEMTHINQLMLGWVLAPEEDTRTLLRLTA LQRLPKVDLDGAAVTRTLDLMAENDVAIDPTYAIHEALLLSRNGEVQAGMADYVDHMPIAVQREARAAWSAIGSPEEDAA YRGAFDQITGTIQRMKERGIFIVMGTDLGGALTLHRELELYQNVGFTPAEILARATLEAAEYMGLDEELGSIEPGKKADF LLVPGNPVEDFKAIKTISLVSKGDTVYFPSEIYPYFGIRPFTEIPAVTPPSSAD
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74206; Mature: 74206
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRFGGASLAALLVLGACAHEVEAPALEAAEMAPPPAPVTETWSVRLFDQTLGQLVATT CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEEHHHHHHHEEEEC EGNTVKVDYEYRNNGRGPTLAETITLGDDSLPTGWTIDGATTFGNEIHETFALADGVASW CCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCC TDTTGSATAEQTEPAIYIPQNASPYTLAIYARALLADDDMTLPAWPAGSLTMSSQDKLRI CCCCCCCCCCCCCCEEEECCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCEEECCCCCEEE EGAGGPVATTAYALVGDDVDPTYFLTDEAGDLFALISPRLVVVREGYEEADDQLKELATR ECCCCCHHHEEEEEECCCCCCCEEEECCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHH LSTERLEAIQAETAHRFDAPLAITNVRVFDPKAKAMSALSTVMVEDGVITAVTAGDADTA HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCC GAYVVDGQGGSLVPGLTEMHGHLGQDAALKNIAAGVTLVRDMGNDNGVFSELIGKIEAGT CEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC LAGPRVVRSGFIEGKSPFSSNNGILVNSEEEALAAVDWYADEGDFWQIKVYNSMTPAWVP CCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCHHHH AIVERAKERGLKVSGHVPAFTNADAMIEAGYDEMTHINQLMLGWVLAPEEDTRTLLRLTA HHHHHHHHCCCEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHEEECCCHHHHHHHHHHH LQRLPKVDLDGAAVTRTLDLMAENDVAIDPTYAIHEALLLSRNGEVQAGMADYVDHMPIA HHHCCCCCCCCHHHHHEEHHHCCCCCEECCHHHHHHHHHHCCCCCCCCCHHHHHHCCCEE VQREARAAWSAIGSPEEDAAYRGAFDQITGTIQRMKERGIFIVMGTDLGGALTLHRELEL EEHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHHHH YQNVGFTPAEILARATLEAAEYMGLDEELGSIEPGKKADFLLVPGNPVEDFKAIKTISLV HHCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHEEE SKGDTVYFPSEIYPYFGIRPFTEIPAVTPPSSAD ECCCEEEECHHCCCCCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure MLNRFGGASLAALLVLGACAHEVEAPALEAAEMAPPPAPVTETWSVRLFDQTLGQLVATT CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEEHHHHHHHEEEEC EGNTVKVDYEYRNNGRGPTLAETITLGDDSLPTGWTIDGATTFGNEIHETFALADGVASW CCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCC TDTTGSATAEQTEPAIYIPQNASPYTLAIYARALLADDDMTLPAWPAGSLTMSSQDKLRI CCCCCCCCCCCCCCEEEECCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCEEECCCCCEEE EGAGGPVATTAYALVGDDVDPTYFLTDEAGDLFALISPRLVVVREGYEEADDQLKELATR ECCCCCHHHEEEEEECCCCCCCEEEECCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHH LSTERLEAIQAETAHRFDAPLAITNVRVFDPKAKAMSALSTVMVEDGVITAVTAGDADTA HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCC GAYVVDGQGGSLVPGLTEMHGHLGQDAALKNIAAGVTLVRDMGNDNGVFSELIGKIEAGT CEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC LAGPRVVRSGFIEGKSPFSSNNGILVNSEEEALAAVDWYADEGDFWQIKVYNSMTPAWVP CCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCHHHH AIVERAKERGLKVSGHVPAFTNADAMIEAGYDEMTHINQLMLGWVLAPEEDTRTLLRLTA HHHHHHHHCCCEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHEEECCCHHHHHHHHHHH LQRLPKVDLDGAAVTRTLDLMAENDVAIDPTYAIHEALLLSRNGEVQAGMADYVDHMPIA HHHCCCCCCCCHHHHHEEHHHCCCCCEECCHHHHHHHHHHCCCCCCCCCHHHHHHCCCEE VQREARAAWSAIGSPEEDAAYRGAFDQITGTIQRMKERGIFIVMGTDLGGALTLHRELEL EEHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHHHH YQNVGFTPAEILARATLEAAEYMGLDEELGSIEPGKKADFLLVPGNPVEDFKAIKTISLV HHCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHEEE SKGDTVYFPSEIYPYFGIRPFTEIPAVTPPSSAD ECCCEEEECHHCCCCCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA