Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114799091

Identifier: 114799091

GI number: 114799091

Start: 1019149

End: 1021233

Strand: Direct

Name: 114799091

Synonym: HNE_1008

Alternate gene names: NA

Gene position: 1019149-1021233 (Clockwise)

Preceding gene: 114797686

Following gene: 114798058

Centisome position: 27.51

GC content: 62.3

Gene sequence:

>2085_bases
ATGTTGAACCGTTTTGGAGGCGCGTCGCTGGCGGCACTGTTGGTGCTGGGCGCGTGCGCGCATGAAGTGGAGGCGCCCGC
ACTGGAAGCCGCCGAAATGGCGCCCCCACCTGCGCCCGTGACCGAGACATGGTCCGTTCGGCTGTTCGATCAGACCCTCG
GCCAGCTGGTTGCCACGACTGAGGGCAACACCGTCAAGGTGGATTACGAATACCGCAATAATGGGCGCGGGCCGACGCTG
GCGGAGACGATCACACTGGGCGATGACAGCTTGCCGACTGGCTGGACCATTGATGGCGCGACGACCTTCGGCAATGAAAT
CCACGAAACCTTTGCGCTGGCCGACGGCGTTGCCAGCTGGACCGACACGACCGGTTCGGCAACCGCCGAGCAGACAGAGC
CTGCCATCTATATTCCGCAGAATGCCTCGCCTTATACCCTCGCCATTTATGCCAGGGCGCTGCTGGCCGATGATGACATG
ACGCTGCCGGCCTGGCCGGCGGGCAGCCTGACGATGAGTTCGCAGGACAAGTTGCGGATCGAAGGCGCGGGCGGCCCCGT
GGCGACGACGGCCTATGCCCTTGTCGGCGATGATGTGGACCCGACTTATTTCCTCACGGATGAAGCGGGCGATCTGTTCG
CGCTGATCTCGCCGCGCCTTGTCGTCGTGCGGGAGGGCTATGAAGAGGCCGATGATCAGCTCAAGGAGCTTGCCACGCGG
CTATCGACTGAGCGGCTGGAGGCGATCCAGGCAGAAACCGCGCACAGGTTTGATGCGCCGCTGGCGATTACAAATGTCCG
CGTCTTTGATCCCAAGGCGAAGGCGATGTCGGCGCTGTCTACCGTGATGGTTGAAGACGGTGTGATTACCGCGGTTACGG
CGGGCGATGCGGACACCGCTGGCGCCTATGTGGTGGACGGGCAGGGCGGATCGCTCGTGCCGGGCCTCACGGAAATGCAT
GGCCATTTGGGGCAGGACGCGGCGCTGAAGAATATTGCGGCGGGCGTCACGCTGGTGCGCGATATGGGCAACGATAACGG
TGTGTTCAGTGAGCTGATCGGCAAGATCGAAGCGGGCACGCTCGCCGGGCCACGTGTCGTCCGCTCCGGTTTCATTGAGG
GCAAGAGCCCGTTCAGCTCGAACAACGGCATCCTTGTGAACAGTGAGGAAGAGGCCCTCGCCGCAGTTGATTGGTATGCG
GACGAGGGCGATTTCTGGCAGATCAAGGTCTACAATTCGATGACGCCTGCCTGGGTGCCCGCTATTGTGGAGCGTGCCAA
GGAACGCGGCCTGAAGGTCAGTGGCCATGTGCCCGCCTTCACCAATGCCGACGCCATGATCGAGGCGGGCTATGACGAGA
TGACCCATATTAACCAGCTGATGCTGGGCTGGGTGCTGGCGCCGGAGGAAGACACAAGAACCCTGCTGCGCCTGACTGCG
CTTCAGCGGCTCCCGAAGGTGGACCTTGATGGCGCAGCCGTGACCCGCACGCTGGACCTGATGGCTGAGAATGACGTCGC
GATTGACCCCACTTACGCGATCCATGAGGCGCTGCTGCTGTCCCGCAATGGTGAGGTGCAGGCAGGCATGGCCGATTATG
TCGACCACATGCCCATCGCCGTGCAGCGCGAGGCGCGGGCTGCCTGGTCGGCCATCGGCAGCCCGGAAGAAGACGCCGCC
TATAGGGGCGCTTTCGACCAGATCACGGGCACGATCCAGCGGATGAAGGAGCGCGGCATCTTCATCGTCATGGGCACAGA
CCTTGGCGGCGCGCTGACGCTGCACCGGGAACTGGAGCTCTATCAGAATGTCGGCTTCACCCCGGCCGAAATCCTCGCCC
GCGCCACGCTGGAAGCAGCCGAGTATATGGGGCTGGATGAAGAACTGGGCTCGATCGAGCCAGGCAAGAAGGCAGATTTC
CTGCTCGTGCCCGGCAATCCTGTGGAAGACTTCAAGGCGATCAAGACCATCAGCCTCGTTTCAAAGGGTGACACGGTCTA
TTTCCCCAGCGAGATCTATCCCTATTTCGGCATCCGGCCTTTCACTGAAATTCCGGCCGTGACGCCGCCATCATCTGCCG
ATTAG

Upstream 100 bases:

>100_bases
GCGATTTACGGCAGACCTTCCCACCTCCGCCCCAATGTGCCACCAATGCCTCTAAACAGGCCGCGCCCTTATGGTGTAGC
GGCAGCAGGGAGGAATTGGG

Downstream 100 bases:

>100_bases
TCTAGGCTGCATCACGGAGGAGACGGGGACCATGTCTGAAGACGTCTGGAGAGCCTATTTCGCAGATATGGGCGGACAGC
CTGCGGCGATCGTATTCAAC

Product: amidohydrolase family protein

Products: NA

Alternate protein names: Amidohydrolase Family Protein; Amidohydrolase Family; Secreted Amidohydrolase; Amidohydrolase-Family Protein; Endoribonuclease L-PSP; ABC-2 Type Transporter

Number of amino acids: Translated: 694; Mature: 694

Protein sequence:

>694_residues
MLNRFGGASLAALLVLGACAHEVEAPALEAAEMAPPPAPVTETWSVRLFDQTLGQLVATTEGNTVKVDYEYRNNGRGPTL
AETITLGDDSLPTGWTIDGATTFGNEIHETFALADGVASWTDTTGSATAEQTEPAIYIPQNASPYTLAIYARALLADDDM
TLPAWPAGSLTMSSQDKLRIEGAGGPVATTAYALVGDDVDPTYFLTDEAGDLFALISPRLVVVREGYEEADDQLKELATR
LSTERLEAIQAETAHRFDAPLAITNVRVFDPKAKAMSALSTVMVEDGVITAVTAGDADTAGAYVVDGQGGSLVPGLTEMH
GHLGQDAALKNIAAGVTLVRDMGNDNGVFSELIGKIEAGTLAGPRVVRSGFIEGKSPFSSNNGILVNSEEEALAAVDWYA
DEGDFWQIKVYNSMTPAWVPAIVERAKERGLKVSGHVPAFTNADAMIEAGYDEMTHINQLMLGWVLAPEEDTRTLLRLTA
LQRLPKVDLDGAAVTRTLDLMAENDVAIDPTYAIHEALLLSRNGEVQAGMADYVDHMPIAVQREARAAWSAIGSPEEDAA
YRGAFDQITGTIQRMKERGIFIVMGTDLGGALTLHRELELYQNVGFTPAEILARATLEAAEYMGLDEELGSIEPGKKADF
LLVPGNPVEDFKAIKTISLVSKGDTVYFPSEIYPYFGIRPFTEIPAVTPPSSAD

Sequences:

>Translated_694_residues
MLNRFGGASLAALLVLGACAHEVEAPALEAAEMAPPPAPVTETWSVRLFDQTLGQLVATTEGNTVKVDYEYRNNGRGPTL
AETITLGDDSLPTGWTIDGATTFGNEIHETFALADGVASWTDTTGSATAEQTEPAIYIPQNASPYTLAIYARALLADDDM
TLPAWPAGSLTMSSQDKLRIEGAGGPVATTAYALVGDDVDPTYFLTDEAGDLFALISPRLVVVREGYEEADDQLKELATR
LSTERLEAIQAETAHRFDAPLAITNVRVFDPKAKAMSALSTVMVEDGVITAVTAGDADTAGAYVVDGQGGSLVPGLTEMH
GHLGQDAALKNIAAGVTLVRDMGNDNGVFSELIGKIEAGTLAGPRVVRSGFIEGKSPFSSNNGILVNSEEEALAAVDWYA
DEGDFWQIKVYNSMTPAWVPAIVERAKERGLKVSGHVPAFTNADAMIEAGYDEMTHINQLMLGWVLAPEEDTRTLLRLTA
LQRLPKVDLDGAAVTRTLDLMAENDVAIDPTYAIHEALLLSRNGEVQAGMADYVDHMPIAVQREARAAWSAIGSPEEDAA
YRGAFDQITGTIQRMKERGIFIVMGTDLGGALTLHRELELYQNVGFTPAEILARATLEAAEYMGLDEELGSIEPGKKADF
LLVPGNPVEDFKAIKTISLVSKGDTVYFPSEIYPYFGIRPFTEIPAVTPPSSAD
>Mature_694_residues
MLNRFGGASLAALLVLGACAHEVEAPALEAAEMAPPPAPVTETWSVRLFDQTLGQLVATTEGNTVKVDYEYRNNGRGPTL
AETITLGDDSLPTGWTIDGATTFGNEIHETFALADGVASWTDTTGSATAEQTEPAIYIPQNASPYTLAIYARALLADDDM
TLPAWPAGSLTMSSQDKLRIEGAGGPVATTAYALVGDDVDPTYFLTDEAGDLFALISPRLVVVREGYEEADDQLKELATR
LSTERLEAIQAETAHRFDAPLAITNVRVFDPKAKAMSALSTVMVEDGVITAVTAGDADTAGAYVVDGQGGSLVPGLTEMH
GHLGQDAALKNIAAGVTLVRDMGNDNGVFSELIGKIEAGTLAGPRVVRSGFIEGKSPFSSNNGILVNSEEEALAAVDWYA
DEGDFWQIKVYNSMTPAWVPAIVERAKERGLKVSGHVPAFTNADAMIEAGYDEMTHINQLMLGWVLAPEEDTRTLLRLTA
LQRLPKVDLDGAAVTRTLDLMAENDVAIDPTYAIHEALLLSRNGEVQAGMADYVDHMPIAVQREARAAWSAIGSPEEDAA
YRGAFDQITGTIQRMKERGIFIVMGTDLGGALTLHRELELYQNVGFTPAEILARATLEAAEYMGLDEELGSIEPGKKADF
LLVPGNPVEDFKAIKTISLVSKGDTVYFPSEIYPYFGIRPFTEIPAVTPPSSAD

Specific function: Unknown

COG id: COG1228

COG function: function code Q; Imidazolonepropionase and related amidohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74206; Mature: 74206

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRFGGASLAALLVLGACAHEVEAPALEAAEMAPPPAPVTETWSVRLFDQTLGQLVATT
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEEHHHHHHHEEEEC
EGNTVKVDYEYRNNGRGPTLAETITLGDDSLPTGWTIDGATTFGNEIHETFALADGVASW
CCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCC
TDTTGSATAEQTEPAIYIPQNASPYTLAIYARALLADDDMTLPAWPAGSLTMSSQDKLRI
CCCCCCCCCCCCCCEEEECCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCEEECCCCCEEE
EGAGGPVATTAYALVGDDVDPTYFLTDEAGDLFALISPRLVVVREGYEEADDQLKELATR
ECCCCCHHHEEEEEECCCCCCCEEEECCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHH
LSTERLEAIQAETAHRFDAPLAITNVRVFDPKAKAMSALSTVMVEDGVITAVTAGDADTA
HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCC
GAYVVDGQGGSLVPGLTEMHGHLGQDAALKNIAAGVTLVRDMGNDNGVFSELIGKIEAGT
CEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
LAGPRVVRSGFIEGKSPFSSNNGILVNSEEEALAAVDWYADEGDFWQIKVYNSMTPAWVP
CCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCHHHH
AIVERAKERGLKVSGHVPAFTNADAMIEAGYDEMTHINQLMLGWVLAPEEDTRTLLRLTA
HHHHHHHHCCCEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHEEECCCHHHHHHHHHHH
LQRLPKVDLDGAAVTRTLDLMAENDVAIDPTYAIHEALLLSRNGEVQAGMADYVDHMPIA
HHHCCCCCCCCHHHHHEEHHHCCCCCEECCHHHHHHHHHHCCCCCCCCCHHHHHHCCCEE
VQREARAAWSAIGSPEEDAAYRGAFDQITGTIQRMKERGIFIVMGTDLGGALTLHRELEL
EEHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHHHH
YQNVGFTPAEILARATLEAAEYMGLDEELGSIEPGKKADFLLVPGNPVEDFKAIKTISLV
HHCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHEEE
SKGDTVYFPSEIYPYFGIRPFTEIPAVTPPSSAD
ECCCEEEECHHCCCCCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MLNRFGGASLAALLVLGACAHEVEAPALEAAEMAPPPAPVTETWSVRLFDQTLGQLVATT
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEEHHHHHHHEEEEC
EGNTVKVDYEYRNNGRGPTLAETITLGDDSLPTGWTIDGATTFGNEIHETFALADGVASW
CCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCC
TDTTGSATAEQTEPAIYIPQNASPYTLAIYARALLADDDMTLPAWPAGSLTMSSQDKLRI
CCCCCCCCCCCCCCEEEECCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCEEECCCCCEEE
EGAGGPVATTAYALVGDDVDPTYFLTDEAGDLFALISPRLVVVREGYEEADDQLKELATR
ECCCCCHHHEEEEEECCCCCCCEEEECCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHH
LSTERLEAIQAETAHRFDAPLAITNVRVFDPKAKAMSALSTVMVEDGVITAVTAGDADTA
HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCC
GAYVVDGQGGSLVPGLTEMHGHLGQDAALKNIAAGVTLVRDMGNDNGVFSELIGKIEAGT
CEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
LAGPRVVRSGFIEGKSPFSSNNGILVNSEEEALAAVDWYADEGDFWQIKVYNSMTPAWVP
CCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCHHHH
AIVERAKERGLKVSGHVPAFTNADAMIEAGYDEMTHINQLMLGWVLAPEEDTRTLLRLTA
HHHHHHHHCCCEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHEEECCCHHHHHHHHHHH
LQRLPKVDLDGAAVTRTLDLMAENDVAIDPTYAIHEALLLSRNGEVQAGMADYVDHMPIA
HHHCCCCCCCCHHHHHEEHHHCCCCCEECCHHHHHHHHHHCCCCCCCCCHHHHHHCCCEE
VQREARAAWSAIGSPEEDAAYRGAFDQITGTIQRMKERGIFIVMGTDLGGALTLHRELEL
EEHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHHHH
YQNVGFTPAEILARATLEAAEYMGLDEELGSIEPGKKADFLLVPGNPVEDFKAIKTISLV
HHCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHEEE
SKGDTVYFPSEIYPYFGIRPFTEIPAVTPPSSAD
ECCCEEEECHHCCCCCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA