Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is ycbL [C]

Identifier: 114799081

GI number: 114799081

Start: 1900977

End: 1902041

Strand: Reverse

Name: ycbL [C]

Synonym: HNE_1843

Alternate gene names: 114799081

Gene position: 1902041-1900977 (Counterclockwise)

Preceding gene: 114799825

Following gene: 114798259

Centisome position: 51.34

GC content: 61.13

Gene sequence:

>1065_bases
ATGGATGGATTTCTCTCAGAACCGACCCAGTACAAGGGTCTGACTTTCCCGCATGGAACGCTGGCGCCCGAACCGGGCGA
AGCAATCACGCTGGCGCCGGGCGTGGAATGGACGCGGATGCCGCTGCCGTTTTCGCTCAAGCACATCAATGTGTGGATAT
TGGATGATGGCGATGGCTGGACCATCGTGGACACCGGCATGCCGCTGCCCGATACCAAAGACGCCTGGCGCAAATTGCTG
GATGAACGGGTAACGCCCGAGAAGCCGCTGAAGCGGGTCATTATCACGCATATGCACCCCGATCATATCGGGTGCGCTGG
CTGGCTCTGTTACAAGTATGACGCCGAGCTGTGGATCAGCCGTCTGGAGTATACGACCTGCCGGATGCTGGTGGCCGATA
CCGGCCGGGACGCGCCCAAGGCGGGGATCGATTTCTATGTGCGGGCCGGGTGGCCCCAGAAAGCCATCGACAATTACGTG
TCGCGCTTTGGCGGGTTCGGGCGCGGCGTGAGCCAGATGCCGGACGCGTTCACGCGGCTGGAAGATGGCGACCGGGTGCA
GCTGGCGGGCCAGGAATGGCGCGTGATTACCGGCAACGGGCATTCGCCTGAGCATGTGTGCCTCTTCAGCGAGACGCTGA
ATGTGGCGATCACCGGTGACCAGCTGTTGCCGCGGATTTCGTCGAATGTTTCGGTGCATCCGACCGAGCCGATGTCCAAT
CCGCTGGATGACTGGATCAAGAGCTGTGAAAAACTGCTGCGGGAGCTGCCCGAGGATTGTTTCATCCTGCCGGCCCACAA
TGAGCCTTTCACAGGCGCTCATATCCGCCTGCGCAATCTGATTGCCGGGCATGAGACGTCGCTGACGCGTCTGCGGCAGA
AGCTCGAAAAGGGACCTTTGAAGGTTCCGGAGACCTTCATTTCGCTGTTCGGGCGGGCCATCAAGGATGACGAGATGGGC
AGCGCCACGGGAGAGGCACTGGCACACCTCAACTACCTGATCCATCGGGGCGAGGTGAAAAGCCGGCCCGACACGGACGG
CGCACTGCTATACAGCCTCGCCTGA

Upstream 100 bases:

>100_bases
AAGCGGACGAAGTTGCCTCCCCGGGAACGCAAGCCGATCAAGTGATCTTTCCCCCGCGTGACGGCTCGACGGGGGAGCCT
GCCGCCGTATCGTGAGTCCC

Downstream 100 bases:

>100_bases
AGCGCTGTTTCGCCTCACATTGAAATGCAGTCTTGCGGGTCATTTCGCCTTCGCAAGCCTGTTGCTTTTCGTCTAAGACA
TGCCGGATTGCCTGTGATTG

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Beta Lactamase; Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Superfamily; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase; Beta-Lactamase Class B; Zn-Dependent Hydrolases; Zn-Dependent Hydrolase Glyoxylase; Metallo-Dependent Enzymatic Protein; Metallo-Beta-Lactamase Family Hydrolase; Hydrolase; Zinc Metallohydrolase; Metal Dependent Hydrolase; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein; Zinc Metallohydrolase Glyoxalase II Family

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MDGFLSEPTQYKGLTFPHGTLAPEPGEAITLAPGVEWTRMPLPFSLKHINVWILDDGDGWTIVDTGMPLPDTKDAWRKLL
DERVTPEKPLKRVIITHMHPDHIGCAGWLCYKYDAELWISRLEYTTCRMLVADTGRDAPKAGIDFYVRAGWPQKAIDNYV
SRFGGFGRGVSQMPDAFTRLEDGDRVQLAGQEWRVITGNGHSPEHVCLFSETLNVAITGDQLLPRISSNVSVHPTEPMSN
PLDDWIKSCEKLLRELPEDCFILPAHNEPFTGAHIRLRNLIAGHETSLTRLRQKLEKGPLKVPETFISLFGRAIKDDEMG
SATGEALAHLNYLIHRGEVKSRPDTDGALLYSLA

Sequences:

>Translated_354_residues
MDGFLSEPTQYKGLTFPHGTLAPEPGEAITLAPGVEWTRMPLPFSLKHINVWILDDGDGWTIVDTGMPLPDTKDAWRKLL
DERVTPEKPLKRVIITHMHPDHIGCAGWLCYKYDAELWISRLEYTTCRMLVADTGRDAPKAGIDFYVRAGWPQKAIDNYV
SRFGGFGRGVSQMPDAFTRLEDGDRVQLAGQEWRVITGNGHSPEHVCLFSETLNVAITGDQLLPRISSNVSVHPTEPMSN
PLDDWIKSCEKLLRELPEDCFILPAHNEPFTGAHIRLRNLIAGHETSLTRLRQKLEKGPLKVPETFISLFGRAIKDDEMG
SATGEALAHLNYLIHRGEVKSRPDTDGALLYSLA
>Mature_354_residues
MDGFLSEPTQYKGLTFPHGTLAPEPGEAITLAPGVEWTRMPLPFSLKHINVWILDDGDGWTIVDTGMPLPDTKDAWRKLL
DERVTPEKPLKRVIITHMHPDHIGCAGWLCYKYDAELWISRLEYTTCRMLVADTGRDAPKAGIDFYVRAGWPQKAIDNYV
SRFGGFGRGVSQMPDAFTRLEDGDRVQLAGQEWRVITGNGHSPEHVCLFSETLNVAITGDQLLPRISSNVSVHPTEPMSN
PLDDWIKSCEKLLRELPEDCFILPAHNEPFTGAHIRLRNLIAGHETSLTRLRQKLEKGPLKVPETFISLFGRAIKDDEMG
SATGEALAHLNYLIHRGEVKSRPDTDGALLYSLA

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39615; Mature: 39615

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGFLSEPTQYKGLTFPHGTLAPEPGEAITLAPGVEWTRMPLPFSLKHINVWILDDGDGW
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCEEEEEEEEEEEECCCCE
TIVDTGMPLPDTKDAWRKLLDERVTPEKPLKRVIITHMHPDHIGCAGWLCYKYDAELWIS
EEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHEEEEEEECHHHHHH
RLEYTTCRMLVADTGRDAPKAGIDFYVRAGWPQKAIDNYVSRFGGFGRGVSQMPDAFTRL
HHHHHHHEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHCCHHHHHC
EDGDRVQLAGQEWRVITGNGHSPEHVCLFSETLNVAITGDQLLPRISSNVSVHPTEPMSN
CCCCEEEECCCCEEEEECCCCCCCEEEEEECCEEEEEECHHHHHHHCCCCEECCCCCCCC
PLDDWIKSCEKLLRELPEDCFILPAHNEPFTGAHIRLRNLIAGHETSLTRLRQKLEKGPL
CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCC
KVPETFISLFGRAIKDDEMGSATGEALAHLNYLIHRGEVKSRPDTDGALLYSLA
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MDGFLSEPTQYKGLTFPHGTLAPEPGEAITLAPGVEWTRMPLPFSLKHINVWILDDGDGW
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCEEEEEEEEEEEECCCCE
TIVDTGMPLPDTKDAWRKLLDERVTPEKPLKRVIITHMHPDHIGCAGWLCYKYDAELWIS
EEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHEEEEEEECHHHHHH
RLEYTTCRMLVADTGRDAPKAGIDFYVRAGWPQKAIDNYVSRFGGFGRGVSQMPDAFTRL
HHHHHHHEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHCCHHHHHC
EDGDRVQLAGQEWRVITGNGHSPEHVCLFSETLNVAITGDQLLPRISSNVSVHPTEPMSN
CCCCEEEECCCCEEEEECCCCCCCEEEEEECCEEEEEECHHHHHHHCCCCEECCCCCCCC
PLDDWIKSCEKLLRELPEDCFILPAHNEPFTGAHIRLRNLIAGHETSLTRLRQKLEKGPL
CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCC
KVPETFISLFGRAIKDDEMGSATGEALAHLNYLIHRGEVKSRPDTDGALLYSLA
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA