| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is otsA [H]
Identifier: 114798991
GI number: 114798991
Start: 1607217
End: 1608584
Strand: Direct
Name: otsA [H]
Synonym: HNE_1575
Alternate gene names: 114798991
Gene position: 1607217-1608584 (Clockwise)
Preceding gene: 114797699
Following gene: 114798428
Centisome position: 43.38
GC content: 56.73
Gene sequence:
>1368_bases TTGGGACGCCTGGTAGCAATATCCAACAGAACGGCCGCCGATGCCGGCGCGCAGGCGGGCGGGCTTGCTGTGGCCGTATG GGACGCCCTCAAAGCGACAGGCGGATTATGGGCAGGCTGGTCCGGCGATATTGTCAGCGACTCCCCAGGCAGCAAACAAT TTGAATCAGAAGACGGCGTTTCTTTCCTTCTGACCGACATGACAGAAGACGAGCATGACGGCTTTTACCTGCGCTATTCC AACAGCACGCTTTGGCCAATATTTCACTATCGGGTAGATCTGGCGACGTTCGATCGCGGTGCCTTTGACCATTATCTCGC GGTAAACGAGCGATTGGCAAACCTCACAATTGAGCATCTGCGCGAACATGACATGGTTTGGGTGCATGACTACCATTTCC TCCCGATGGCCGATGCGTTGCGCCGGGCCGGATGGAAGGGGCGCACCGGATTTTTCCTGCACATACCGTTTCCCACACCA GACATGTTCCGCGCTCTTCCAGAGCATAGCTGGCTGGCACGCGCGCTTTGCCAGTTTGATCTGATCGGCTTCCAGTCCGA ATCCGACCGCACGAATTTCGAACGTTATCTGGTCGACAGCCTGGATGCAGATGCTTCTGAAGCGCCGATTTATACTGTCG CAGGCCGGAGAGTGCGTGTGGGTGTCTATCCCATTGGAATTGATGCTGCCGCTTTTGAAGAAGCCGCTCGAAGCCCTGCG GCCGGGGACGCGGCTGCCCGCATCGGACGTTTCCTGGGAAATCGCGATCTCATCATCGGTGTGGACCGGATGGATTATTC CAAAGGGCTGCCTCAACGATTTGAGGCCGTTGGCGCATTTTTTGACAACCATCCGGAGCTGCATGGCAAGGTGTCGGTAA CGCAGATTGCGACCCCCTCACGAACCAAAGTGGAAGAGTATCGCCAGCTGCGCTATGAACTCGATCAGCTCGTGGGACGT ATCAATGGAGATTATGGCGATCTCGACTGGATACCATTGCGCTATCTGGCGCGAAGCTATTCCAGAGATGAATTGGCCGG CCTCTTCCGCATCGCACGCGTAGGGTTGGTTACGCCGCTTCGGGACGGGATGAACCTCGTGGCAAAGGAATACGTGATGG CGCAGGACCCGGAAGATCCCGGCGTTCTTATACTTTCAGAATTCGCTGGGGCCGCGGAACAACTTCACGAAGCGCTGATC GTAAATCCCCATGACCGCTCGACATTGGCGGAGACCATCCGGATCGCGCTGACTATGCCTCTTGAGGAACGAAAACGGCG ATGGGAGGCCCTCCGCGATGTTGTAAGGCGGACAGATATTGCGTGGTGGCGGGACCTGTTCCTGAACGACCTTCGCGCCA AAATCTGA
Upstream 100 bases:
>100_bases CTGCCTACAAGGGATAACCCATGCGGACGGGTGGACATGATGGAGCGAAGCTGACGTAATCAAACCTGATCAGATAAAGC AGTGAGGAATTGGAGCAAAT
Downstream 100 bases:
>100_bases TCGCTCGCTTTCGACCTTTAAATCCATCTGCCAGGAATAAATGACCGCTCCTTTGCTTGATCCATCCGCCGCGCTGTTCC TTGATTTTGACGGAACGATG
Product: UDP-forming alpha,alpha-trehalose-phosphate synthase
Products: NA
Alternate protein names: Osmoregulatory trehalose synthesis protein A; Trehalose-6-phosphate synthase; UDP-glucose-glucosephosphate glucosyltransferase [H]
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MGRLVAISNRTAADAGAQAGGLAVAVWDALKATGGLWAGWSGDIVSDSPGSKQFESEDGVSFLLTDMTEDEHDGFYLRYS NSTLWPIFHYRVDLATFDRGAFDHYLAVNERLANLTIEHLREHDMVWVHDYHFLPMADALRRAGWKGRTGFFLHIPFPTP DMFRALPEHSWLARALCQFDLIGFQSESDRTNFERYLVDSLDADASEAPIYTVAGRRVRVGVYPIGIDAAAFEEAARSPA AGDAAARIGRFLGNRDLIIGVDRMDYSKGLPQRFEAVGAFFDNHPELHGKVSVTQIATPSRTKVEEYRQLRYELDQLVGR INGDYGDLDWIPLRYLARSYSRDELAGLFRIARVGLVTPLRDGMNLVAKEYVMAQDPEDPGVLILSEFAGAAEQLHEALI VNPHDRSTLAETIRIALTMPLEERKRRWEALRDVVRRTDIAWWRDLFLNDLRAKI
Sequences:
>Translated_455_residues MGRLVAISNRTAADAGAQAGGLAVAVWDALKATGGLWAGWSGDIVSDSPGSKQFESEDGVSFLLTDMTEDEHDGFYLRYS NSTLWPIFHYRVDLATFDRGAFDHYLAVNERLANLTIEHLREHDMVWVHDYHFLPMADALRRAGWKGRTGFFLHIPFPTP DMFRALPEHSWLARALCQFDLIGFQSESDRTNFERYLVDSLDADASEAPIYTVAGRRVRVGVYPIGIDAAAFEEAARSPA AGDAAARIGRFLGNRDLIIGVDRMDYSKGLPQRFEAVGAFFDNHPELHGKVSVTQIATPSRTKVEEYRQLRYELDQLVGR INGDYGDLDWIPLRYLARSYSRDELAGLFRIARVGLVTPLRDGMNLVAKEYVMAQDPEDPGVLILSEFAGAAEQLHEALI VNPHDRSTLAETIRIALTMPLEERKRRWEALRDVVRRTDIAWWRDLFLNDLRAKI >Mature_454_residues GRLVAISNRTAADAGAQAGGLAVAVWDALKATGGLWAGWSGDIVSDSPGSKQFESEDGVSFLLTDMTEDEHDGFYLRYSN STLWPIFHYRVDLATFDRGAFDHYLAVNERLANLTIEHLREHDMVWVHDYHFLPMADALRRAGWKGRTGFFLHIPFPTPD MFRALPEHSWLARALCQFDLIGFQSESDRTNFERYLVDSLDADASEAPIYTVAGRRVRVGVYPIGIDAAAFEEAARSPAA GDAAARIGRFLGNRDLIIGVDRMDYSKGLPQRFEAVGAFFDNHPELHGKVSVTQIATPSRTKVEEYRQLRYELDQLVGRI NGDYGDLDWIPLRYLARSYSRDELAGLFRIARVGLVTPLRDGMNLVAKEYVMAQDPEDPGVLILSEFAGAAEQLHEALIV NPHDRSTLAETIRIALTMPLEERKRRWEALRDVVRRTDIAWWRDLFLNDLRAKI
Specific function: Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=454, Percent_Identity=47.136563876652, Blast_Score=411, Evalue=1e-116, Organism=Caenorhabditis elegans, GI71987012, Length=424, Percent_Identity=28.3018867924528, Blast_Score=156, Evalue=3e-38, Organism=Caenorhabditis elegans, GI115533558, Length=423, Percent_Identity=27.6595744680851, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI115533560, Length=423, Percent_Identity=27.6595744680851, Blast_Score=152, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6319602, Length=470, Percent_Identity=34.2553191489362, Blast_Score=291, Evalue=1e-79, Organism=Saccharomyces cerevisiae, GI6320279, Length=401, Percent_Identity=30.1745635910224, Blast_Score=172, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6323917, Length=445, Percent_Identity=27.4157303370787, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6323537, Length=395, Percent_Identity=27.3417721518987, Blast_Score=161, Evalue=3e-40, Organism=Drosophila melanogaster, GI19920676, Length=465, Percent_Identity=38.7096774193548, Blast_Score=290, Evalue=2e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001830 - InterPro: IPR012766 [H]
Pfam domain/function: PF00982 Glyco_transf_20 [H]
EC number: =2.4.1.15 [H]
Molecular weight: Translated: 51344; Mature: 51212
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLVAISNRTAADAGAQAGGLAVAVWDALKATGGLWAGWSGDIVSDSPGSKQFESEDGV CCCEEEECCCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC SFLLTDMTEDEHDGFYLRYSNSTLWPIFHYRVDLATFDRGAFDHYLAVNERLANLTIEHL EEEEECCCCCCCCCEEEEECCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH REHDMVWVHDYHFLPMADALRRAGWKGRTGFFLHIPFPTPDMFRALPEHSWLARALCQFD HHCCEEEEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHH LIGFQSESDRTNFERYLVDSLDADASEAPIYTVAGRRVRVGVYPIGIDAAAFEEAARSPA HCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEEEECCCHHHHHHHHCCCC AGDAAARIGRFLGNRDLIIGVDRMDYSKGLPQRFEAVGAFFDNHPELHGKVSVTQIATPS CCHHHHHHHHHHCCCCEEEEECCCCHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCC RTKVEEYRQLRYELDQLVGRINGDYGDLDWIPLRYLARSYSRDELAGLFRIARVGLVTPL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHH RDGMNLVAKEYVMAQDPEDPGVLILSEFAGAAEQLHEALIVNPHDRSTLAETIRIALTMP HHHHHHHHHHHHHHCCCCCCCEEEEHHHCCHHHHHHHHEEECCCCHHHHHHHHHHEEECC LEERKRRWEALRDVVRRTDIAWWRDLFLNDLRAKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GRLVAISNRTAADAGAQAGGLAVAVWDALKATGGLWAGWSGDIVSDSPGSKQFESEDGV CCEEEECCCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC SFLLTDMTEDEHDGFYLRYSNSTLWPIFHYRVDLATFDRGAFDHYLAVNERLANLTIEHL EEEEECCCCCCCCCEEEEECCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH REHDMVWVHDYHFLPMADALRRAGWKGRTGFFLHIPFPTPDMFRALPEHSWLARALCQFD HHCCEEEEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHH LIGFQSESDRTNFERYLVDSLDADASEAPIYTVAGRRVRVGVYPIGIDAAAFEEAARSPA HCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEEEECCCHHHHHHHHCCCC AGDAAARIGRFLGNRDLIIGVDRMDYSKGLPQRFEAVGAFFDNHPELHGKVSVTQIATPS CCHHHHHHHHHHCCCCEEEEECCCCHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCC RTKVEEYRQLRYELDQLVGRINGDYGDLDWIPLRYLARSYSRDELAGLFRIARVGLVTPL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHH RDGMNLVAKEYVMAQDPEDPGVLILSEFAGAAEQLHEALIVNPHDRSTLAETIRIALTMP HHHHHHHHHHHHHHCCCCCCCEEEEHHHCCHHHHHHHHEEECCCCHHHHHHHHHHEEECC LEERKRRWEALRDVVRRTDIAWWRDLFLNDLRAKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA