| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is rrmA [C]
Identifier: 114798952
GI number: 114798952
Start: 843453
End: 844550
Strand: Direct
Name: rrmA [C]
Synonym: HNE_0821
Alternate gene names: 114798952
Gene position: 843453-844550 (Clockwise)
Preceding gene: 114798580
Following gene: 114799703
Centisome position: 22.77
GC content: 62.84
Gene sequence:
>1098_bases ATGGGATGGCGCAGAACAGCCTCGAAAACCGCCGCGCGCGCCGGCTATGCCGCCGGGCAAGGGCTGCGCTCTGCCTGGTA TACGGCCCAGATGCAGGCCGCCCGCGCCCGCGCCGAAGGGTTCAACCGCCCCGGCGAACCTGCGTTTCAGCCAAGCCGCG GCAAGCCCGACATGGCCGAACTGCGCCGGGCCTTCTTCGAGCTGTTCATCCAGGACCGGGCCAATATCGAGGCCGGCCTT TACCCCGCGCCGCGGGAGCTGGGCCTTGCCCGCTTGCCCGGCGCCCTGAAGTCGGCCCGCGCCTTTCAGCAGGATGTCAA AGCCGTCGACCAGAGGCGTCTTTCCAGAGACGGCAGCGAACTTGCGCGCACGCTGCAGGAAGAAAGCGACTTTCTCCACA GGAATGCCAATCGCTATCCCGAATATTATCTTCAGAACTTTCATTATCAGACCGGCGGCTGGTTTACCGATGAAAGCGCC CGGCTTTACGACACACAGGTGGAAGCCCTCTTCTCAGGCACGGCGGACGCCATGCGCCGCGCCGCCCTCGCGCAGATTGC CATAGAGCTCAAAGGGCGCGACCAGAGACAGGTAAGCCTGATGGATGTCGCCTGCGGCAACGGCCGCTTCCTTGAAACGG TGCTGGGCGTCTGGCCCCGCCTGAATGTCACGGGGCTTGATCTTTCGCCCTCCTACACAGAGGCCGCCCGCGCGCGCCTC GCGCCCTGGCGGCAGGCGGATATTATTCAGGACATGGCCGAGGCCATGCCTGTGGAAAACGCCAGCTTCGACATCGCCGT CTCCATCTTCCTGTTTCACGAGCTTCCCCCGCGCGTGCGCCCGCTTGTAGTCGCCGAGGTGTTCCGTGCACTGAAGCCTG GTGGCCTGTTCATCCTCGCAGACAGTTTGCAGTTTTCAGATCGCCCCGCGCTGGATGGCCTGCTCGAATATTTTCCGCAC GGGTTTCATGAGCCCTACTATAAAGACTATCTCGGATGGGCGCTGGACGAGACGCTGACAGAGGCAGGTTTTGTTAAGGA GTGTGGCAATCTTGCCTTCCTTACGAAGGTTACTGCCTGGCGCAAACCGCTGCGCTGA
Upstream 100 bases:
>100_bases GGGCCGCCACTGTCCAGCACACTTTGGCGCGGCCAAGCTGAACGGAAGCTGAAGCGCGCGATGGCTGGACGCGTGGCCGT GTCAGGCACATATTCTCCCT
Downstream 100 bases:
>100_bases CAGCAACATTAAGCGTATGTAATTAATCGTGTTTTTTCAGACACAGTGTCATGGATTTCCTGTCACATAACTGTATGGAA AGGTGGCATACGGATTTTTC
Product: hypothetical protein
Products: S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
Alternate protein names: Methyltransferase; Methyltransferase Domain Family; UbiE/COQ5 Family Methlytransferase; SAM-Dependent Methyltransferase; Methyltransferase UbiE; Generic Methyl-Transferase; UbiE/COQ5 Methyltransferase; Methyltransferase UbiE/COQ5 Family Protein; Methyltransferase UbiE/COQ5 Family; Methlytransferase; Ubiquinone/Menaquinone Biosynthesis Protein
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MGWRRTASKTAARAGYAAGQGLRSAWYTAQMQAARARAEGFNRPGEPAFQPSRGKPDMAELRRAFFELFIQDRANIEAGL YPAPRELGLARLPGALKSARAFQQDVKAVDQRRLSRDGSELARTLQEESDFLHRNANRYPEYYLQNFHYQTGGWFTDESA RLYDTQVEALFSGTADAMRRAALAQIAIELKGRDQRQVSLMDVACGNGRFLETVLGVWPRLNVTGLDLSPSYTEAARARL APWRQADIIQDMAEAMPVENASFDIAVSIFLFHELPPRVRPLVVAEVFRALKPGGLFILADSLQFSDRPALDGLLEYFPH GFHEPYYKDYLGWALDETLTEAGFVKECGNLAFLTKVTAWRKPLR
Sequences:
>Translated_365_residues MGWRRTASKTAARAGYAAGQGLRSAWYTAQMQAARARAEGFNRPGEPAFQPSRGKPDMAELRRAFFELFIQDRANIEAGL YPAPRELGLARLPGALKSARAFQQDVKAVDQRRLSRDGSELARTLQEESDFLHRNANRYPEYYLQNFHYQTGGWFTDESA RLYDTQVEALFSGTADAMRRAALAQIAIELKGRDQRQVSLMDVACGNGRFLETVLGVWPRLNVTGLDLSPSYTEAARARL APWRQADIIQDMAEAMPVENASFDIAVSIFLFHELPPRVRPLVVAEVFRALKPGGLFILADSLQFSDRPALDGLLEYFPH GFHEPYYKDYLGWALDETLTEAGFVKECGNLAFLTKVTAWRKPLR >Mature_364_residues GWRRTASKTAARAGYAAGQGLRSAWYTAQMQAARARAEGFNRPGEPAFQPSRGKPDMAELRRAFFELFIQDRANIEAGLY PAPRELGLARLPGALKSARAFQQDVKAVDQRRLSRDGSELARTLQEESDFLHRNANRYPEYYLQNFHYQTGGWFTDESAR LYDTQVEALFSGTADAMRRAALAQIAIELKGRDQRQVSLMDVACGNGRFLETVLGVWPRLNVTGLDLSPSYTEAARARLA PWRQADIIQDMAEAMPVENASFDIAVSIFLFHELPPRVRPLVVAEVFRALKPGGLFILADSLQFSDRPALDGLLEYFPHG FHEPYYKDYLGWALDETLTEAGFVKECGNLAFLTKVTAWRKPLR
Specific function: Specifically Methylates The Guanosine In Position 745 Of 23s rRNA. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.51 [C]
Molecular weight: Translated: 41074; Mature: 40943
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWRRTASKTAARAGYAAGQGLRSAWYTAQMQAARARAEGFNRPGEPAFQPSRGKPDMAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH LRRAFFELFIQDRANIEAGLYPAPRELGLARLPGALKSARAFQQDVKAVDQRRLSRDGSE HHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHH LARTLQEESDFLHRNANRYPEYYLQNFHYQTGGWFTDESARLYDTQVEALFSGTADAMRR HHHHHHHHHHHHHHCCCCCHHHHHHHCEECCCCEECCCCCHHHHHHHHHHHHCCHHHHHH AALAQIAIELKGRDQRQVSLMDVACGNGRFLETVLGVWPRLNVTGLDLSPSYTEAARARL HHHHHHHHHHCCCCCHHEEEEEEECCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHC APWRQADIIQDMAEAMPVENASFDIAVSIFLFHELPPRVRPLVVAEVFRALKPGGLFILA CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEE DSLQFSDRPALDGLLEYFPHGFHEPYYKDYLGWALDETLTEAGFVKECGNLAFLTKVTAW CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH RKPLR HCCCC >Mature Secondary Structure GWRRTASKTAARAGYAAGQGLRSAWYTAQMQAARARAEGFNRPGEPAFQPSRGKPDMAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH LRRAFFELFIQDRANIEAGLYPAPRELGLARLPGALKSARAFQQDVKAVDQRRLSRDGSE HHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHH LARTLQEESDFLHRNANRYPEYYLQNFHYQTGGWFTDESARLYDTQVEALFSGTADAMRR HHHHHHHHHHHHHHCCCCCHHHHHHHCEECCCCEECCCCCHHHHHHHHHHHHCCHHHHHH AALAQIAIELKGRDQRQVSLMDVACGNGRFLETVLGVWPRLNVTGLDLSPSYTEAARARL HHHHHHHHHHCCCCCHHEEEEEEECCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHC APWRQADIIQDMAEAMPVENASFDIAVSIFLFHELPPRVRPLVVAEVFRALKPGGLFILA CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEE DSLQFSDRPALDGLLEYFPHGFHEPYYKDYLGWALDETLTEAGFVKECGNLAFLTKVTAW CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH RKPLR HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Unidentified protein factor B [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; rRNA [C]
Specific reaction: S-Adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
General reaction: Methyl group transfer [C]
Inhibitor: Mg2+; Unidentified protein factor A1 [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA