Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is rrmA [C]

Identifier: 114798952

GI number: 114798952

Start: 843453

End: 844550

Strand: Direct

Name: rrmA [C]

Synonym: HNE_0821

Alternate gene names: 114798952

Gene position: 843453-844550 (Clockwise)

Preceding gene: 114798580

Following gene: 114799703

Centisome position: 22.77

GC content: 62.84

Gene sequence:

>1098_bases
ATGGGATGGCGCAGAACAGCCTCGAAAACCGCCGCGCGCGCCGGCTATGCCGCCGGGCAAGGGCTGCGCTCTGCCTGGTA
TACGGCCCAGATGCAGGCCGCCCGCGCCCGCGCCGAAGGGTTCAACCGCCCCGGCGAACCTGCGTTTCAGCCAAGCCGCG
GCAAGCCCGACATGGCCGAACTGCGCCGGGCCTTCTTCGAGCTGTTCATCCAGGACCGGGCCAATATCGAGGCCGGCCTT
TACCCCGCGCCGCGGGAGCTGGGCCTTGCCCGCTTGCCCGGCGCCCTGAAGTCGGCCCGCGCCTTTCAGCAGGATGTCAA
AGCCGTCGACCAGAGGCGTCTTTCCAGAGACGGCAGCGAACTTGCGCGCACGCTGCAGGAAGAAAGCGACTTTCTCCACA
GGAATGCCAATCGCTATCCCGAATATTATCTTCAGAACTTTCATTATCAGACCGGCGGCTGGTTTACCGATGAAAGCGCC
CGGCTTTACGACACACAGGTGGAAGCCCTCTTCTCAGGCACGGCGGACGCCATGCGCCGCGCCGCCCTCGCGCAGATTGC
CATAGAGCTCAAAGGGCGCGACCAGAGACAGGTAAGCCTGATGGATGTCGCCTGCGGCAACGGCCGCTTCCTTGAAACGG
TGCTGGGCGTCTGGCCCCGCCTGAATGTCACGGGGCTTGATCTTTCGCCCTCCTACACAGAGGCCGCCCGCGCGCGCCTC
GCGCCCTGGCGGCAGGCGGATATTATTCAGGACATGGCCGAGGCCATGCCTGTGGAAAACGCCAGCTTCGACATCGCCGT
CTCCATCTTCCTGTTTCACGAGCTTCCCCCGCGCGTGCGCCCGCTTGTAGTCGCCGAGGTGTTCCGTGCACTGAAGCCTG
GTGGCCTGTTCATCCTCGCAGACAGTTTGCAGTTTTCAGATCGCCCCGCGCTGGATGGCCTGCTCGAATATTTTCCGCAC
GGGTTTCATGAGCCCTACTATAAAGACTATCTCGGATGGGCGCTGGACGAGACGCTGACAGAGGCAGGTTTTGTTAAGGA
GTGTGGCAATCTTGCCTTCCTTACGAAGGTTACTGCCTGGCGCAAACCGCTGCGCTGA

Upstream 100 bases:

>100_bases
GGGCCGCCACTGTCCAGCACACTTTGGCGCGGCCAAGCTGAACGGAAGCTGAAGCGCGCGATGGCTGGACGCGTGGCCGT
GTCAGGCACATATTCTCCCT

Downstream 100 bases:

>100_bases
CAGCAACATTAAGCGTATGTAATTAATCGTGTTTTTTCAGACACAGTGTCATGGATTTCCTGTCACATAACTGTATGGAA
AGGTGGCATACGGATTTTTC

Product: hypothetical protein

Products: S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]

Alternate protein names: Methyltransferase; Methyltransferase Domain Family; UbiE/COQ5 Family Methlytransferase; SAM-Dependent Methyltransferase; Methyltransferase UbiE; Generic Methyl-Transferase; UbiE/COQ5 Methyltransferase; Methyltransferase UbiE/COQ5 Family Protein; Methyltransferase UbiE/COQ5 Family; Methlytransferase; Ubiquinone/Menaquinone Biosynthesis Protein

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MGWRRTASKTAARAGYAAGQGLRSAWYTAQMQAARARAEGFNRPGEPAFQPSRGKPDMAELRRAFFELFIQDRANIEAGL
YPAPRELGLARLPGALKSARAFQQDVKAVDQRRLSRDGSELARTLQEESDFLHRNANRYPEYYLQNFHYQTGGWFTDESA
RLYDTQVEALFSGTADAMRRAALAQIAIELKGRDQRQVSLMDVACGNGRFLETVLGVWPRLNVTGLDLSPSYTEAARARL
APWRQADIIQDMAEAMPVENASFDIAVSIFLFHELPPRVRPLVVAEVFRALKPGGLFILADSLQFSDRPALDGLLEYFPH
GFHEPYYKDYLGWALDETLTEAGFVKECGNLAFLTKVTAWRKPLR

Sequences:

>Translated_365_residues
MGWRRTASKTAARAGYAAGQGLRSAWYTAQMQAARARAEGFNRPGEPAFQPSRGKPDMAELRRAFFELFIQDRANIEAGL
YPAPRELGLARLPGALKSARAFQQDVKAVDQRRLSRDGSELARTLQEESDFLHRNANRYPEYYLQNFHYQTGGWFTDESA
RLYDTQVEALFSGTADAMRRAALAQIAIELKGRDQRQVSLMDVACGNGRFLETVLGVWPRLNVTGLDLSPSYTEAARARL
APWRQADIIQDMAEAMPVENASFDIAVSIFLFHELPPRVRPLVVAEVFRALKPGGLFILADSLQFSDRPALDGLLEYFPH
GFHEPYYKDYLGWALDETLTEAGFVKECGNLAFLTKVTAWRKPLR
>Mature_364_residues
GWRRTASKTAARAGYAAGQGLRSAWYTAQMQAARARAEGFNRPGEPAFQPSRGKPDMAELRRAFFELFIQDRANIEAGLY
PAPRELGLARLPGALKSARAFQQDVKAVDQRRLSRDGSELARTLQEESDFLHRNANRYPEYYLQNFHYQTGGWFTDESAR
LYDTQVEALFSGTADAMRRAALAQIAIELKGRDQRQVSLMDVACGNGRFLETVLGVWPRLNVTGLDLSPSYTEAARARLA
PWRQADIIQDMAEAMPVENASFDIAVSIFLFHELPPRVRPLVVAEVFRALKPGGLFILADSLQFSDRPALDGLLEYFPHG
FHEPYYKDYLGWALDETLTEAGFVKECGNLAFLTKVTAWRKPLR

Specific function: Specifically Methylates The Guanosine In Position 745 Of 23s rRNA. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.51 [C]

Molecular weight: Translated: 41074; Mature: 40943

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWRRTASKTAARAGYAAGQGLRSAWYTAQMQAARARAEGFNRPGEPAFQPSRGKPDMAE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
LRRAFFELFIQDRANIEAGLYPAPRELGLARLPGALKSARAFQQDVKAVDQRRLSRDGSE
HHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
LARTLQEESDFLHRNANRYPEYYLQNFHYQTGGWFTDESARLYDTQVEALFSGTADAMRR
HHHHHHHHHHHHHHCCCCCHHHHHHHCEECCCCEECCCCCHHHHHHHHHHHHCCHHHHHH
AALAQIAIELKGRDQRQVSLMDVACGNGRFLETVLGVWPRLNVTGLDLSPSYTEAARARL
HHHHHHHHHHCCCCCHHEEEEEEECCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHC
APWRQADIIQDMAEAMPVENASFDIAVSIFLFHELPPRVRPLVVAEVFRALKPGGLFILA
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEE
DSLQFSDRPALDGLLEYFPHGFHEPYYKDYLGWALDETLTEAGFVKECGNLAFLTKVTAW
CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RKPLR
HCCCC
>Mature Secondary Structure 
GWRRTASKTAARAGYAAGQGLRSAWYTAQMQAARARAEGFNRPGEPAFQPSRGKPDMAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
LRRAFFELFIQDRANIEAGLYPAPRELGLARLPGALKSARAFQQDVKAVDQRRLSRDGSE
HHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
LARTLQEESDFLHRNANRYPEYYLQNFHYQTGGWFTDESARLYDTQVEALFSGTADAMRR
HHHHHHHHHHHHHHCCCCCHHHHHHHCEECCCCEECCCCCHHHHHHHHHHHHCCHHHHHH
AALAQIAIELKGRDQRQVSLMDVACGNGRFLETVLGVWPRLNVTGLDLSPSYTEAARARL
HHHHHHHHHHCCCCCHHEEEEEEECCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHC
APWRQADIIQDMAEAMPVENASFDIAVSIFLFHELPPRVRPLVVAEVFRALKPGGLFILA
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEE
DSLQFSDRPALDGLLEYFPHGFHEPYYKDYLGWALDETLTEAGFVKECGNLAFLTKVTAW
CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RKPLR
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Unidentified protein factor B [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-methionine; rRNA [C]

Specific reaction: S-Adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]

General reaction: Methyl group transfer [C]

Inhibitor: Mg2+; Unidentified protein factor A1 [C]

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA