| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798923
Identifier: 114798923
GI number: 114798923
Start: 1985893
End: 1986564
Strand: Direct
Name: 114798923
Synonym: HNE_1916
Alternate gene names: NA
Gene position: 1985893-1986564 (Clockwise)
Preceding gene: 114799887
Following gene: 114799181
Centisome position: 53.6
GC content: 61.46
Gene sequence:
>672_bases ATGCTCACCCTTTCCCGGCGTTTCGCAGCAGTGGCGTTCTCCGCTCTGGCACTTGTTGCCTGTGGCGCGGCGGGCGACGG TGCCGGCACATCTGGCGCCAACCCGTCCGAGGCAAATGCTGATGGCGAACTCGGCCATGTCCTGGGGCAAGCCGACGCCC CGCTGACGATCATCGAATACGCCTCGCCCACCTGCCCCGCCTGTAAGTATTTCCACGACACGGTGAAACCCACGATCGAG GAAAAATACATCTCCACCGGCAAGGTGAAGTTCGTCTTCCGCGAATATCCGCTCAACGAGATTGACGTGGCCGCTTACGC GATGGCCCGCTGCGCCGGCGACGACAAGTTCTTCGACGTGCTGGATGATCTCTTCGAGAACCAGGAAGGCATCCGCTATG CCGCCCAGAACGGCGTTGTGAAAACCACCCTCGGCGCCATTGGCCAGCGCCACGGCATCGCCGATACCGCCACCTTCGAG GCCTGCCTCTCCAACAGCGAAATCCGCCAGGCTCTCGCAGACACCTACGCCACCTCCGAAAAGTGGGGCGTTGAAGGCAC GCCAACCTTCATCATCGACGGCGTGAAGCACAACTTCCAGGGTGAATACACGACCGCTGAAGGCTTCTCGAAACAGATCG ACGCGAAACTCGCCGAACTGGGCGCCCAGTAG
Upstream 100 bases:
>100_bases GGCGAGGCTGTGCTATCCGCCACAGAGTAAACAGGATCGCCCGGTTTGTTAACCGTTTGGAAACCGGCGCGACTCATTCC TTAACGCGAGGCTTATGATC
Downstream 100 bases:
>100_bases CGATGAGGAACCGGCATGCAGATAACTGAACTCCGCATCGCCGGCTTCAAGTCGTTCGTTGACCCGCAAACCGTACCGAT CGAGCCAGGGCTGACAGGCA
Product: DSBA-like thioredoxin domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MLTLSRRFAAVAFSALALVACGAAGDGAGTSGANPSEANADGELGHVLGQADAPLTIIEYASPTCPACKYFHDTVKPTIE EKYISTGKVKFVFREYPLNEIDVAAYAMARCAGDDKFFDVLDDLFENQEGIRYAAQNGVVKTTLGAIGQRHGIADTATFE ACLSNSEIRQALADTYATSEKWGVEGTPTFIIDGVKHNFQGEYTTAEGFSKQIDAKLAELGAQ
Sequences:
>Translated_223_residues MLTLSRRFAAVAFSALALVACGAAGDGAGTSGANPSEANADGELGHVLGQADAPLTIIEYASPTCPACKYFHDTVKPTIE EKYISTGKVKFVFREYPLNEIDVAAYAMARCAGDDKFFDVLDDLFENQEGIRYAAQNGVVKTTLGAIGQRHGIADTATFE ACLSNSEIRQALADTYATSEKWGVEGTPTFIIDGVKHNFQGEYTTAEGFSKQIDAKLAELGAQ >Mature_223_residues MLTLSRRFAAVAFSALALVACGAAGDGAGTSGANPSEANADGELGHVLGQADAPLTIIEYASPTCPACKYFHDTVKPTIE EKYISTGKVKFVFREYPLNEIDVAAYAMARCAGDDKFFDVLDDLFENQEGIRYAAQNGVVKTTLGAIGQRHGIADTATFE ACLSNSEIRQALADTYATSEKWGVEGTPTFIIDGVKHNFQGEYTTAEGFSKQIDAKLAELGAQ
Specific function: May be required for disulfide bond formation in some proteins [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23736; Mature: 23736
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLSRRFAAVAFSALALVACGAAGDGAGTSGANPSEANADGELGHVLGQADAPLTIIEY CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEC ASPTCPACKYFHDTVKPTIEEKYISTGKVKFVFREYPLNEIDVAAYAMARCAGDDKFFDV CCCCCCHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHH LDDLFENQEGIRYAAQNGVVKTTLGAIGQRHGIADTATFEACLSNSEIRQALADTYATSE HHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC KWGVEGTPTFIIDGVKHNFQGEYTTAEGFSKQIDAKLAELGAQ CCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLTLSRRFAAVAFSALALVACGAAGDGAGTSGANPSEANADGELGHVLGQADAPLTIIEY CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEC ASPTCPACKYFHDTVKPTIEEKYISTGKVKFVFREYPLNEIDVAAYAMARCAGDDKFFDV CCCCCCHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHH LDDLFENQEGIRYAAQNGVVKTTLGAIGQRHGIADTATFEACLSNSEIRQALADTYATSE HHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC KWGVEGTPTFIIDGVKHNFQGEYTTAEGFSKQIDAKLAELGAQ CCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA