| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798921
Identifier: 114798921
GI number: 114798921
Start: 1415903
End: 1416406
Strand: Direct
Name: 114798921
Synonym: HNE_1386
Alternate gene names: NA
Gene position: 1415903-1416406 (Clockwise)
Preceding gene: 114798170
Following gene: 114799869
Centisome position: 38.22
GC content: 62.3
Gene sequence:
>504_bases ATGAGCCTGGAACTTAGCCGCAGCGACCTGCTGGCAATTGACCCCCTAGATGTCGTGGAAGACGTGCTGGAAGCCGCTGG CTGGCCAGCCGAACGCGACGAAGAAGGCACGCTTCAAGTGGTCGCCGAAACCCGCTGGGGAGATATGGGCGCGCTGTTTG CGCACCGTCCCGAGCCCGCCGCCGTGCATTTCTCGATGACGCTGGACGTGAAACCGCAGGACGGCAAACGCGCGCTGATC AACGAACTCGTGATCCTCGCCAATGAGCGCCTCTGGATCGGGCATTTCGATTTCTGGGCGGATGATGGCGTGATCGTGTT CCGCTACACTTTCCCGCTGGAAGGCCGCGAAGAGCTGACCGAGGGCGAAGTGAGCGCGGTTCTGGCCGCCTCCATCAGCG CCGCCGACCGGTTTATCCCGGCGTTCAATTTCCTTGTCTGGGCTGGCAAGTCTCCGCGCGATGCGATCGACGCGGTGATG TTTGAAACCCACGGCGAAGCCTGA
Upstream 100 bases:
>100_bases TTATGAACTTTGACATCCCCGGTACGCCCGGCGTTGAGTGCGGTTGGATTTGTGGTGCGAATCCGGCAGCTTATGCAAAT CTCAACGCGGAGGCCCGCCC
Downstream 100 bases:
>100_bases GCTGACCCGATGAAGCCAGCAGCGTCCCTGACCCTTGTCGGCGCGGGCCGAATGGGCTCCGCGCTGCTGCATGGCTGGCT GAAGGGTCCCGAGCGCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSLELSRSDLLAIDPLDVVEDVLEAAGWPAERDEEGTLQVVAETRWGDMGALFAHRPEPAAVHFSMTLDVKPQDGKRALI NELVILANERLWIGHFDFWADDGVIVFRYTFPLEGREELTEGEVSAVLAASISAADRFIPAFNFLVWAGKSPRDAIDAVM FETHGEA
Sequences:
>Translated_167_residues MSLELSRSDLLAIDPLDVVEDVLEAAGWPAERDEEGTLQVVAETRWGDMGALFAHRPEPAAVHFSMTLDVKPQDGKRALI NELVILANERLWIGHFDFWADDGVIVFRYTFPLEGREELTEGEVSAVLAASISAADRFIPAFNFLVWAGKSPRDAIDAVM FETHGEA >Mature_166_residues SLELSRSDLLAIDPLDVVEDVLEAAGWPAERDEEGTLQVVAETRWGDMGALFAHRPEPAAVHFSMTLDVKPQDGKRALIN ELVILANERLWIGHFDFWADDGVIVFRYTFPLEGREELTEGEVSAVLAASISAADRFIPAFNFLVWAGKSPRDAIDAVMF ETHGEA
Specific function: Unknown
COG id: COG5465
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18497; Mature: 18366
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLELSRSDLLAIDPLDVVEDVLEAAGWPAERDEEGTLQVVAETRWGDMGALFAHRPEPA CCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCC AVHFSMTLDVKPQDGKRALINELVILANERLWIGHFDFWADDGVIVFRYTFPLEGREELT EEEEEEEEEECCCCCHHHHHHHHHEEECCEEEEEEECEECCCCEEEEEEECCCCCHHHHC EGEVSAVLAASISAADRFIPAFNFLVWAGKSPRDAIDAVMFETHGEA CCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHEECCCCC >Mature Secondary Structure SLELSRSDLLAIDPLDVVEDVLEAAGWPAERDEEGTLQVVAETRWGDMGALFAHRPEPA CCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCC AVHFSMTLDVKPQDGKRALINELVILANERLWIGHFDFWADDGVIVFRYTFPLEGREELT EEEEEEEEEECCCCCHHHHHHHHHEEECCEEEEEEECEECCCCEEEEEEECCCCCHHHHC EGEVSAVLAASISAADRFIPAFNFLVWAGKSPRDAIDAVMFETHGEA CCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA