| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798880
Identifier: 114798880
GI number: 114798880
Start: 906615
End: 906968
Strand: Direct
Name: 114798880
Synonym: HNE_0887
Alternate gene names: NA
Gene position: 906615-906968 (Clockwise)
Preceding gene: 114797085
Following gene: 114799958
Centisome position: 24.47
GC content: 62.99
Gene sequence:
>354_bases ATGTCCATCATCCGTTATCTTCCAGCAGCGGCGGGCCTTGTGCTCGCCGCCTGCGCATCGGGCACAACCTCGCCCACAAT GCGCTGGAGCGCTTCGGCCTGGAATGGCCTTGCCGCCCAGACCATCGGCACAGACAATTACAGCTTCTTCGCCGCGCCGC TCGATGGTGAAGGCTTCAAGCTCAAGCTGACCCTTGCCACCGATGGCGCTTTCCGTATCCAGGAGGGCGAGGACACCTTT CCGGAAGAATTGCAGGCTGCCGCCGAGCAGGCCGCGCCTGAAGGCTGCCGTCTCGACACGCTCACGCTCGCCGCAGATGG CAGCGCCGAAGCGGCCTATGATTGCCAAACTTAA
Upstream 100 bases:
>100_bases CCGCTCCGCGATGGACGAGCCCCCGAAGGTCGCCTTCTAAGCCGCTCGCGCAGCCAGCCGGGCTGCGCTATCCTGGCAGG GTCGCCAAGGGAGGTGCCCC
Downstream 100 bases:
>100_bases ATGTTAGCGGGCATGGACACCGGCGCGCAGGATAGATCAGAATGCGGAAGGTCTGTTAGAGGGTGAGGCCCATCATGCGC TATCTGGTCATTGCCGCGTC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSIIRYLPAAAGLVLAACASGTTSPTMRWSASAWNGLAAQTIGTDNYSFFAAPLDGEGFKLKLTLATDGAFRIQEGEDTF PEELQAAAEQAAPEGCRLDTLTLAADGSAEAAYDCQT
Sequences:
>Translated_117_residues MSIIRYLPAAAGLVLAACASGTTSPTMRWSASAWNGLAAQTIGTDNYSFFAAPLDGEGFKLKLTLATDGAFRIQEGEDTF PEELQAAAEQAAPEGCRLDTLTLAADGSAEAAYDCQT >Mature_116_residues SIIRYLPAAAGLVLAACASGTTSPTMRWSASAWNGLAAQTIGTDNYSFFAAPLDGEGFKLKLTLATDGAFRIQEGEDTFP EELQAAAEQAAPEGCRLDTLTLAADGSAEAAYDCQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12170; Mature: 12038
Theoretical pI: Translated: 3.87; Mature: 3.87
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIRYLPAAAGLVLAACASGTTSPTMRWSASAWNGLAAQTIGTDNYSFFAAPLDGEGFK CCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCCEEEEECCCCCCEE LKLTLATDGAFRIQEGEDTFPEELQAAAEQAAPEGCRLDTLTLAADGSAEAAYDCQT EEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEECCC >Mature Secondary Structure SIIRYLPAAAGLVLAACASGTTSPTMRWSASAWNGLAAQTIGTDNYSFFAAPLDGEGFK CHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCCEEEEECCCCCCEE LKLTLATDGAFRIQEGEDTFPEELQAAAEQAAPEGCRLDTLTLAADGSAEAAYDCQT EEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA