| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798843
Identifier: 114798843
GI number: 114798843
Start: 6941
End: 7612
Strand: Reverse
Name: 114798843
Synonym: HNE_0010
Alternate gene names: NA
Gene position: 7612-6941 (Counterclockwise)
Preceding gene: 114799986
Following gene: 114798742
Centisome position: 0.21
GC content: 61.76
Gene sequence:
>672_bases ATGGCCGATGTCCTGATGCCCCGCGCCACCGCCGTATGGCTCCTCGACAACACGACCCTGACCTTTGGCCAGATCGCGAA GTTCTGCGGCCTGCACCATCTCGAGGTCAAAGGTATTGCCGATGGCGATGTTGCCGAGAACATGCGCGGCGTTGACCCGA TTGCCGGCGGTATGCTCTCCCGCGAAGAGATCGCTCTGGGCGAAGAAAATCCCGATTACGAGCTGCAGCTCGCCAAATCG AAGATCGCCCATATTCCCCAGCCCAAGCGCAAGGGTAGCCGCTACACGCCGGTCATCCGCCGCCAGGACAAGCCGGACGC CGTGGCATGGTTCATCCGTAACCACCCGGAAGTGACCGACGCGCAGATCATCAAGCTGATCGGCACGACCAAATCGACGA TCAACAATGTGCGCGACAAGTCTCACTGGAATTCCCAGAATATCCGCCCGGTCGACCCGGTGACGCTGGGCCTCTGCAGC CAGATCGAGCTGGATGAAGTGATCTCGAAAGCCTCCGACCGCCGCCGCAAGATGGACGCCGAGCGCGCCGCCCGCGGCGA AGGCCCAGGCCTCACCGAAACCAAGGACACGGCAGACGAGTACAAGGTTGAGGAAGAGGATGTCCGCAAGAAGGACGTCT CGGCCGCAGACGTGTTCCGCGACTTCGACTAG
Upstream 100 bases:
>100_bases GTCAAGGTTCACAGTTTGCCTGAAACCTCATCCGCCCGGCACTCGCGTGCCGGGCGGCTGCATTTCAGGCGCCCAGTTTG GAAAGATACAGGAGACTTCC
Downstream 100 bases:
>100_bases CCTTCGGCGTTACAGTCAGATCAAAAAAGCCGGACCTTTTGGGGCCCGGCTTTTTTTATGCCTTCCGTCTCAGGAAGACA TAGAACGCGCCGCTGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MADVLMPRATAVWLLDNTTLTFGQIAKFCGLHHLEVKGIADGDVAENMRGVDPIAGGMLSREEIALGEENPDYELQLAKS KIAHIPQPKRKGSRYTPVIRRQDKPDAVAWFIRNHPEVTDAQIIKLIGTTKSTINNVRDKSHWNSQNIRPVDPVTLGLCS QIELDEVISKASDRRRKMDAERAARGEGPGLTETKDTADEYKVEEEDVRKKDVSAADVFRDFD
Sequences:
>Translated_223_residues MADVLMPRATAVWLLDNTTLTFGQIAKFCGLHHLEVKGIADGDVAENMRGVDPIAGGMLSREEIALGEENPDYELQLAKS KIAHIPQPKRKGSRYTPVIRRQDKPDAVAWFIRNHPEVTDAQIIKLIGTTKSTINNVRDKSHWNSQNIRPVDPVTLGLCS QIELDEVISKASDRRRKMDAERAARGEGPGLTETKDTADEYKVEEEDVRKKDVSAADVFRDFD >Mature_222_residues ADVLMPRATAVWLLDNTTLTFGQIAKFCGLHHLEVKGIADGDVAENMRGVDPIAGGMLSREEIALGEENPDYELQLAKSK IAHIPQPKRKGSRYTPVIRRQDKPDAVAWFIRNHPEVTDAQIIKLIGTTKSTINNVRDKSHWNSQNIRPVDPVTLGLCSQ IELDEVISKASDRRRKMDAERAARGEGPGLTETKDTADEYKVEEEDVRKKDVSAADVFRDFD
Specific function: Unknown
COG id: COG3820
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24932; Mature: 24801
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVLMPRATAVWLLDNTTLTFGQIAKFCGLHHLEVKGIADGDVAENMRGVDPIAGGMLS CCCCCCCCCEEEEEECCCEECHHHHHHHHCCCCEEECCCCCCHHHHHCCCCCHHHCCCCC REEIALGEENPDYELQLAKSKIAHIPQPKRKGSRYTPVIRRQDKPDAVAWFIRNHPEVTD HHHHCCCCCCCCCEEEEHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCEEHHHHCCCCCHH AQIIKLIGTTKSTINNVRDKSHWNSQNIRPVDPVTLGLCSQIELDEVISKASDRRRKMDA HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH ERAARGEGPGLTETKDTADEYKVEEEDVRKKDVSAADVFRDFD HHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure ADVLMPRATAVWLLDNTTLTFGQIAKFCGLHHLEVKGIADGDVAENMRGVDPIAGGMLS CCCCCCCCEEEEEECCCEECHHHHHHHHCCCCEEECCCCCCHHHHHCCCCCHHHCCCCC REEIALGEENPDYELQLAKSKIAHIPQPKRKGSRYTPVIRRQDKPDAVAWFIRNHPEVTD HHHHCCCCCCCCCEEEEHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCEEHHHHCCCCCHH AQIIKLIGTTKSTINNVRDKSHWNSQNIRPVDPVTLGLCSQIELDEVISKASDRRRKMDA HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH ERAARGEGPGLTETKDTADEYKVEEEDVRKKDVSAADVFRDFD HHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA