Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114798843

Identifier: 114798843

GI number: 114798843

Start: 6941

End: 7612

Strand: Reverse

Name: 114798843

Synonym: HNE_0010

Alternate gene names: NA

Gene position: 7612-6941 (Counterclockwise)

Preceding gene: 114799986

Following gene: 114798742

Centisome position: 0.21

GC content: 61.76

Gene sequence:

>672_bases
ATGGCCGATGTCCTGATGCCCCGCGCCACCGCCGTATGGCTCCTCGACAACACGACCCTGACCTTTGGCCAGATCGCGAA
GTTCTGCGGCCTGCACCATCTCGAGGTCAAAGGTATTGCCGATGGCGATGTTGCCGAGAACATGCGCGGCGTTGACCCGA
TTGCCGGCGGTATGCTCTCCCGCGAAGAGATCGCTCTGGGCGAAGAAAATCCCGATTACGAGCTGCAGCTCGCCAAATCG
AAGATCGCCCATATTCCCCAGCCCAAGCGCAAGGGTAGCCGCTACACGCCGGTCATCCGCCGCCAGGACAAGCCGGACGC
CGTGGCATGGTTCATCCGTAACCACCCGGAAGTGACCGACGCGCAGATCATCAAGCTGATCGGCACGACCAAATCGACGA
TCAACAATGTGCGCGACAAGTCTCACTGGAATTCCCAGAATATCCGCCCGGTCGACCCGGTGACGCTGGGCCTCTGCAGC
CAGATCGAGCTGGATGAAGTGATCTCGAAAGCCTCCGACCGCCGCCGCAAGATGGACGCCGAGCGCGCCGCCCGCGGCGA
AGGCCCAGGCCTCACCGAAACCAAGGACACGGCAGACGAGTACAAGGTTGAGGAAGAGGATGTCCGCAAGAAGGACGTCT
CGGCCGCAGACGTGTTCCGCGACTTCGACTAG

Upstream 100 bases:

>100_bases
GTCAAGGTTCACAGTTTGCCTGAAACCTCATCCGCCCGGCACTCGCGTGCCGGGCGGCTGCATTTCAGGCGCCCAGTTTG
GAAAGATACAGGAGACTTCC

Downstream 100 bases:

>100_bases
CCTTCGGCGTTACAGTCAGATCAAAAAAGCCGGACCTTTTGGGGCCCGGCTTTTTTTATGCCTTCCGTCTCAGGAAGACA
TAGAACGCGCCGCTGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MADVLMPRATAVWLLDNTTLTFGQIAKFCGLHHLEVKGIADGDVAENMRGVDPIAGGMLSREEIALGEENPDYELQLAKS
KIAHIPQPKRKGSRYTPVIRRQDKPDAVAWFIRNHPEVTDAQIIKLIGTTKSTINNVRDKSHWNSQNIRPVDPVTLGLCS
QIELDEVISKASDRRRKMDAERAARGEGPGLTETKDTADEYKVEEEDVRKKDVSAADVFRDFD

Sequences:

>Translated_223_residues
MADVLMPRATAVWLLDNTTLTFGQIAKFCGLHHLEVKGIADGDVAENMRGVDPIAGGMLSREEIALGEENPDYELQLAKS
KIAHIPQPKRKGSRYTPVIRRQDKPDAVAWFIRNHPEVTDAQIIKLIGTTKSTINNVRDKSHWNSQNIRPVDPVTLGLCS
QIELDEVISKASDRRRKMDAERAARGEGPGLTETKDTADEYKVEEEDVRKKDVSAADVFRDFD
>Mature_222_residues
ADVLMPRATAVWLLDNTTLTFGQIAKFCGLHHLEVKGIADGDVAENMRGVDPIAGGMLSREEIALGEENPDYELQLAKSK
IAHIPQPKRKGSRYTPVIRRQDKPDAVAWFIRNHPEVTDAQIIKLIGTTKSTINNVRDKSHWNSQNIRPVDPVTLGLCSQ
IELDEVISKASDRRRKMDAERAARGEGPGLTETKDTADEYKVEEEDVRKKDVSAADVFRDFD

Specific function: Unknown

COG id: COG3820

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24932; Mature: 24801

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADVLMPRATAVWLLDNTTLTFGQIAKFCGLHHLEVKGIADGDVAENMRGVDPIAGGMLS
CCCCCCCCCEEEEEECCCEECHHHHHHHHCCCCEEECCCCCCHHHHHCCCCCHHHCCCCC
REEIALGEENPDYELQLAKSKIAHIPQPKRKGSRYTPVIRRQDKPDAVAWFIRNHPEVTD
HHHHCCCCCCCCCEEEEHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCEEHHHHCCCCCHH
AQIIKLIGTTKSTINNVRDKSHWNSQNIRPVDPVTLGLCSQIELDEVISKASDRRRKMDA
HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
ERAARGEGPGLTETKDTADEYKVEEEDVRKKDVSAADVFRDFD
HHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCHHHHHHCCC
>Mature Secondary Structure 
ADVLMPRATAVWLLDNTTLTFGQIAKFCGLHHLEVKGIADGDVAENMRGVDPIAGGMLS
CCCCCCCCEEEEEECCCEECHHHHHHHHCCCCEEECCCCCCHHHHHCCCCCHHHCCCCC
REEIALGEENPDYELQLAKSKIAHIPQPKRKGSRYTPVIRRQDKPDAVAWFIRNHPEVTD
HHHHCCCCCCCCCEEEEHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCEEHHHHCCCCCHH
AQIIKLIGTTKSTINNVRDKSHWNSQNIRPVDPVTLGLCSQIELDEVISKASDRRRKMDA
HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
ERAARGEGPGLTETKDTADEYKVEEEDVRKKDVSAADVFRDFD
HHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA