| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is htrB [C]
Identifier: 114798797
GI number: 114798797
Start: 710832
End: 711809
Strand: Reverse
Name: htrB [C]
Synonym: HNE_0699
Alternate gene names: 114798797
Gene position: 711809-710832 (Counterclockwise)
Preceding gene: 114799558
Following gene: 114797796
Centisome position: 19.21
GC content: 64.83
Gene sequence:
>978_bases ATGAACACCCAGCCCCCCCCCTCCAACCCTGGCGGCGCCTATGTCCGCCCGAAGGACATCGATAACCGCGCCACCCTCGG CCAGCGGATCGCCTGGCGGCTGGAAACGATTGCCTGGGATCTGATTTACTGGGCGCCGATGAAAATGCTGGGGCCGGACA AGGCGTCAGACTTCGGCGGCTGGCTGGTGAAGAAGATCGGCCCGCTTTTTTCCCAGCACAAGACAACGAAGCGCAATCTG CGCCTTGCCTTTCCGGACTGGAGCGAGGCGCAGGTGGAAGAGACCGCCCTGGCGGCCTGGGAAAATGCCGGGCGCACGGC GGGCGAGCTGCCCCACTTGCCGAAGATTGATCCCTACACGTCCGGCCGCGTGGAGATCATCGGGCTGGATGTGCTCGACC AGATCAATACCAGTTGCAAGGGCGCGGTCTTTGTCTCCGGGCATTTCGCAAACTGGGAGATCATGCCGGCGGCCATCGTC AAGCGCATTCCCCATGCGGTGATGACCTACCGTGCGCTGAACAATCCGCATATCGACAAGCGCATCGCCGACCTGCGCCA TGATTACGGCACCGCCGTCAACGCCCCCAAGGGCATCGGCACGCGCGAGCTGATGCGGGCGCTTGCCAAGGGCGCGCCGG TTGCGCTGATGAATGACCAGAAGTTCAATGAAGGGATTGCGGTGCCCTTCTTCGGCCACCTCGCCATGACCGCGCCGGGG CCGACCCGGCTGGCGCTGAAATACGGCGTGCCGATTGTGCCGGTCTCAACCGTGCGCACGGGCCCTGCCCGCTTCCGTAT CGAGTTCCACACGCCTTTCGTGCCCGAGGATACCGGTCATCCGGAGGCGGACATTGAGCGCGCCGTGCAGCGCATCACCG CCTTCATCGAAGACCAGGTGCGCGCCCACCCCGGCCAATGGTTCTGGCAGCATCGCCGCTGGCCCAAGGAAGCCTGGCGC GAGGCGGGGATCAGCTGA
Upstream 100 bases:
>100_bases CGCAATCAGAAATCCTCGCCTGGCCGGTCACCGCCGTGTTCGAGGACACCGCAGCGCTTGACGCCGTGCTCGCCCCGATC TTCAAACGCGCTGGCAAACC
Downstream 100 bases:
>100_bases GGCGTTGGCCTACTCTGCCAGCGGGGCCGAGGCGGGATGCATCTCCGGGCCGACAGGCTCAAACCAGATGAAGGGGCCCT GAGGCACGCTCCCAGGTGGC
Product: lipid A biosynthesis acyltransferase
Products: NA
Alternate protein names: Lipid A Biosynthesis Lauroyl Acyltransferase; Lauroyl/Myristoyl Acyltransferase; Acyltransferase; Acyltransferase HtrB Family; Lipid A Biosynthesis-Lipid IVA Acyltransferase; Bacterial Lipid A Biosynthesis Acyltransferase Superfamily; Bacterial Lipid A Biosynthesis Acyltransferase; Lauroyl Acyltransferase; Lipid A Biosynthesis Lauroyl/Myristoyl Acyltransferase; Lipid A Biosynthesis Lauroyl Acyltransferase Subfamily; Lipid A Biosynthesis Lauroyl Acyltransferase Protein; Lipid A Biosynthesis Acyltransferase Family; Lipid A Lauroyl Acyltransferase; Lipid A Lauroyl Acyltransferase Protein; Lipid A Acyl Transferase
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MNTQPPPSNPGGAYVRPKDIDNRATLGQRIAWRLETIAWDLIYWAPMKMLGPDKASDFGGWLVKKIGPLFSQHKTTKRNL RLAFPDWSEAQVEETALAAWENAGRTAGELPHLPKIDPYTSGRVEIIGLDVLDQINTSCKGAVFVSGHFANWEIMPAAIV KRIPHAVMTYRALNNPHIDKRIADLRHDYGTAVNAPKGIGTRELMRALAKGAPVALMNDQKFNEGIAVPFFGHLAMTAPG PTRLALKYGVPIVPVSTVRTGPARFRIEFHTPFVPEDTGHPEADIERAVQRITAFIEDQVRAHPGQWFWQHRRWPKEAWR EAGIS
Sequences:
>Translated_325_residues MNTQPPPSNPGGAYVRPKDIDNRATLGQRIAWRLETIAWDLIYWAPMKMLGPDKASDFGGWLVKKIGPLFSQHKTTKRNL RLAFPDWSEAQVEETALAAWENAGRTAGELPHLPKIDPYTSGRVEIIGLDVLDQINTSCKGAVFVSGHFANWEIMPAAIV KRIPHAVMTYRALNNPHIDKRIADLRHDYGTAVNAPKGIGTRELMRALAKGAPVALMNDQKFNEGIAVPFFGHLAMTAPG PTRLALKYGVPIVPVSTVRTGPARFRIEFHTPFVPEDTGHPEADIERAVQRITAFIEDQVRAHPGQWFWQHRRWPKEAWR EAGIS >Mature_325_residues MNTQPPPSNPGGAYVRPKDIDNRATLGQRIAWRLETIAWDLIYWAPMKMLGPDKASDFGGWLVKKIGPLFSQHKTTKRNL RLAFPDWSEAQVEETALAAWENAGRTAGELPHLPKIDPYTSGRVEIIGLDVLDQINTSCKGAVFVSGHFANWEIMPAAIV KRIPHAVMTYRALNNPHIDKRIADLRHDYGTAVNAPKGIGTRELMRALAKGAPVALMNDQKFNEGIAVPFFGHLAMTAPG PTRLALKYGVPIVPVSTVRTGPARFRIEFHTPFVPEDTGHPEADIERAVQRITAFIEDQVRAHPGQWFWQHRRWPKEAWR EAGIS
Specific function: Acylates The Intermediate (Kdo)2-Lipid IVa To Form (Kdo)2-(Lauroyl)-Lipid IVa. Has 10 Fold Selectivity For Lauroyl- Acp Over Myristoyl-Acp. [C]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.-
Molecular weight: Translated: 36336; Mature: 36336
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTQPPPSNPGGAYVRPKDIDNRATLGQRIAWRLETIAWDLIYWAPMKMLGPDKASDFGG CCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH WLVKKIGPLFSQHKTTKRNLRLAFPDWSEAQVEETALAAWENAGRTAGELPHLPKIDPYT HHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC SGRVEIIGLDVLDQINTSCKGAVFVSGHFANWEIMPAAIVKRIPHAVMTYRALNNPHIDK CCCEEEEEEHHHHHCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHH RIADLRHDYGTAVNAPKGIGTRELMRALAKGAPVALMNDQKFNEGIAVPFFGHLAMTAPG HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCEECCEEECCCC PTRLALKYGVPIVPVSTVRTGPARFRIEFHTPFVPEDTGHPEADIERAVQRITAFIEDQV CCEEEEECCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RAHPGQWFWQHRRWPKEAWREAGIS HCCCCHHHHHHCCCHHHHHHHCCCC >Mature Secondary Structure MNTQPPPSNPGGAYVRPKDIDNRATLGQRIAWRLETIAWDLIYWAPMKMLGPDKASDFGG CCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH WLVKKIGPLFSQHKTTKRNLRLAFPDWSEAQVEETALAAWENAGRTAGELPHLPKIDPYT HHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC SGRVEIIGLDVLDQINTSCKGAVFVSGHFANWEIMPAAIVKRIPHAVMTYRALNNPHIDK CCCEEEEEEHHHHHCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHH RIADLRHDYGTAVNAPKGIGTRELMRALAKGAPVALMNDQKFNEGIAVPFFGHLAMTAPG HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCEECCEEECCCC PTRLALKYGVPIVPVSTVRTGPARFRIEFHTPFVPEDTGHPEADIERAVQRITAFIEDQV CCEEEEECCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RAHPGQWFWQHRRWPKEAWREAGIS HCCCCHHHHHHCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Acyltransferases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA