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The map label for this gene is yaaJ [C]

Identifier: 114798776

GI number: 114798776

Start: 89975

End: 91498

Strand: Reverse

Name: yaaJ [C]

Synonym: HNE_0101

Alternate gene names: 114798776

Gene position: 91498-89975 (Counterclockwise)

Preceding gene: 114799575

Following gene: 114797697

Centisome position: 2.47

GC content: 58.2

Gene sequence:

>1524_bases
ATGCTTGCGACGCTATATGCCCATCTCGAGGCTGGCATTCAGAATATCAGCGGCTTCATCTGGGGCGGAGAGTGGAACGG
AGCCCAGGTTCTTCCTGTCGGTCCGATTGCCGTTGTTCTGCTTGGTACAGGCCTGTTCTTCATGTTGCGCCTGGGTGGCC
GGCCACTTCTGCGGTTCATCCCGGCCCTTGTTGAGGTCTGGAAAGGCCGCAAAGGCAATGGCGATCCGAGTGCGATCACA
CCCTTTCAGGCTCTTTCTACGGCGCTATCGGGACAGGTAGGGACAGGCAACATTGTCGGTGTGGCCACCGCGCTCACCCT
GGGCGGGCCGGGCGCAATCTTCTGGATGTGGGTGACGGCCATCTTCGGCATGGCGCTCGCCTTTGCTGAAAGCTCGCTTG
CCATCAAATATCGCGAAATCGATGAGAATGGCCGCATCAATGGTGGCCCGATGTACTACATCAAGAAAGGCCTCGGAAAG
AACTGGACCTGGCTGGCCGCGATCTTCTGCGTCGGGACATTGTTATCTGCAACCGCGACGGGCGGCATGATCCAGGCCAA
CAGCCTGACTGCGAATATTCATTCCGCGTTTTCCGATGGTGGAATTGGCATTCCGCTGTGGCTGCTGGGGATCGTTCTGG
CGGGCCTTGTCTTTGCGGTGATCGTCGGAGGTATCAAATCCATCGGCCGGGTTGCGGGAAGCCTCGTTCCCGCGATGGCG
GCTCTCTACATTCTCGCCTGCCTCATAATCTTGTTGCTCAATATACAATATATTCCCGGCGCGTTTGGCATGATCTTCTC
TTCTGCCTTCGGCCTGAACCAGGCCGCTGGCGGACTTGCAGGCTATGCGGTGCTTTCGGCGATCCGTTTTGGTGTGGCAC
GCGGCCTGTTTTCCAATGAAGCAGGCCAAGGCTCCGCGCCAATCGCGCACGCCGCCTCTCAGATGAAAAATCCCGCCAAG
CAGGGCGAGATCGCCATGATCGGTGTGTTCATCGACACGATGGTACTTTGCACCATGACGGCGCTCGTGATCCTCACGGC
CGAAGGAAGCTGGGCAACAGCCGAGCAGTTCAAGCAATGGGCGGGTGAGACGACGACACATGTGTGGATGGCGGAAGGCA
GCAACCCTGCCACGCTCACCAACCAGGCCTTTACAGATGCTGTCCCCGGGCCGGTCGGCGGCTGGCTCGTGACGCTGTGT
CTGACACTGTTTGCCTTCACCACCATAATCGGATGGTCCTACTATGCCGAACAGGCAGTGACCTTCCTTGTCGGGGAATG
GGCAACCAAGCCTTTCCGCTACATCTGGGTGGTAATCATCTTCATCGGCGCCATGGCCGAGGTGAACATTGTCTGGCTGT
TTGGCGACATCGCCAACGCGTCGATGGCCTTCCCGAACCTGATCGCCATCCTGCTGCTGTCCGGTGTGGTCTATGGCATT
CACAAATCAAACGGTGATCCTGACACGGCCGACGGCGACAGCATTCTGGAAGACTTGCGCATAAAAGAAACGCCCGCCGA
ATAG

Upstream 100 bases:

>100_bases
AACAAAGCCCGAGCCAGAACAGTCGAAGGCTTCCCATACGTCCGAAGCGGGCTAGTGTGCCTCCGAATTGACACTTTTGG
CGCCGGGGAGGCCCTTATCC

Downstream 100 bases:

>100_bases
GCGGGCGCTTCCCAAGGCTCAAGTTTTTATCAGCCGTTAGATCGTCAGGACGATCTTGCCGAAATGCTTCTGGCTGGCCT
GGTGGGCAAAGGCAGCGGCG

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MLATLYAHLEAGIQNISGFIWGGEWNGAQVLPVGPIAVVLLGTGLFFMLRLGGRPLLRFIPALVEVWKGRKGNGDPSAIT
PFQALSTALSGQVGTGNIVGVATALTLGGPGAIFWMWVTAIFGMALAFAESSLAIKYREIDENGRINGGPMYYIKKGLGK
NWTWLAAIFCVGTLLSATATGGMIQANSLTANIHSAFSDGGIGIPLWLLGIVLAGLVFAVIVGGIKSIGRVAGSLVPAMA
ALYILACLIILLLNIQYIPGAFGMIFSSAFGLNQAAGGLAGYAVLSAIRFGVARGLFSNEAGQGSAPIAHAASQMKNPAK
QGEIAMIGVFIDTMVLCTMTALVILTAEGSWATAEQFKQWAGETTTHVWMAEGSNPATLTNQAFTDAVPGPVGGWLVTLC
LTLFAFTTIIGWSYYAEQAVTFLVGEWATKPFRYIWVVIIFIGAMAEVNIVWLFGDIANASMAFPNLIAILLLSGVVYGI
HKSNGDPDTADGDSILEDLRIKETPAE

Sequences:

>Translated_507_residues
MLATLYAHLEAGIQNISGFIWGGEWNGAQVLPVGPIAVVLLGTGLFFMLRLGGRPLLRFIPALVEVWKGRKGNGDPSAIT
PFQALSTALSGQVGTGNIVGVATALTLGGPGAIFWMWVTAIFGMALAFAESSLAIKYREIDENGRINGGPMYYIKKGLGK
NWTWLAAIFCVGTLLSATATGGMIQANSLTANIHSAFSDGGIGIPLWLLGIVLAGLVFAVIVGGIKSIGRVAGSLVPAMA
ALYILACLIILLLNIQYIPGAFGMIFSSAFGLNQAAGGLAGYAVLSAIRFGVARGLFSNEAGQGSAPIAHAASQMKNPAK
QGEIAMIGVFIDTMVLCTMTALVILTAEGSWATAEQFKQWAGETTTHVWMAEGSNPATLTNQAFTDAVPGPVGGWLVTLC
LTLFAFTTIIGWSYYAEQAVTFLVGEWATKPFRYIWVVIIFIGAMAEVNIVWLFGDIANASMAFPNLIAILLLSGVVYGI
HKSNGDPDTADGDSILEDLRIKETPAE
>Mature_507_residues
MLATLYAHLEAGIQNISGFIWGGEWNGAQVLPVGPIAVVLLGTGLFFMLRLGGRPLLRFIPALVEVWKGRKGNGDPSAIT
PFQALSTALSGQVGTGNIVGVATALTLGGPGAIFWMWVTAIFGMALAFAESSLAIKYREIDENGRINGGPMYYIKKGLGK
NWTWLAAIFCVGTLLSATATGGMIQANSLTANIHSAFSDGGIGIPLWLLGIVLAGLVFAVIVGGIKSIGRVAGSLVPAMA
ALYILACLIILLLNIQYIPGAFGMIFSSAFGLNQAAGGLAGYAVLSAIRFGVARGLFSNEAGQGSAPIAHAASQMKNPAK
QGEIAMIGVFIDTMVLCTMTALVILTAEGSWATAEQFKQWAGETTTHVWMAEGSNPATLTNQAFTDAVPGPVGGWLVTLC
LTLFAFTTIIGWSYYAEQAVTFLVGEWATKPFRYIWVVIIFIGAMAEVNIVWLFGDIANASMAFPNLIAILLLSGVVYGI
HKSNGDPDTADGDSILEDLRIKETPAE

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=476, Percent_Identity=36.9747899159664, Blast_Score=232, Evalue=3e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 53303; Mature: 53303

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLATLYAHLEAGIQNISGFIWGGEWNGAQVLPVGPIAVVLLGTGLFFMLRLGGRPLLRFI
CHHHHHHHHHHHHHHCCEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHH
PALVEVWKGRKGNGDPSAITPFQALSTALSGQVGTGNIVGVATALTLGGPGAIFWMWVTA
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHH
IFGMALAFAESSLAIKYREIDENGRINGGPMYYIKKGLGKNWTWLAAIFCVGTLLSATAT
HHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
GGMIQANSLTANIHSAFSDGGIGIPLWLLGIVLAGLVFAVIVGGIKSIGRVAGSLVPAMA
CCEEEECCEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALYILACLIILLLNIQYIPGAFGMIFSSAFGLNQAAGGLAGYAVLSAIRFGVARGLFSNE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCC
AGQGSAPIAHAASQMKNPAKQGEIAMIGVFIDTMVLCTMTALVILTAEGSWATAEQFKQW
CCCCCCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHH
AGETTTHVWMAEGSNPATLTNQAFTDAVPGPVGGWLVTLCLTLFAFTTIIGWSYYAEQAV
CCCCEEEEEEECCCCCCEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFLVGEWATKPFRYIWVVIIFIGAMAEVNIVWLFGDIANASMAFPNLIAILLLSGVVYGI
HHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEH
HKSNGDPDTADGDSILEDLRIKETPAE
CCCCCCCCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLATLYAHLEAGIQNISGFIWGGEWNGAQVLPVGPIAVVLLGTGLFFMLRLGGRPLLRFI
CHHHHHHHHHHHHHHCCEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHH
PALVEVWKGRKGNGDPSAITPFQALSTALSGQVGTGNIVGVATALTLGGPGAIFWMWVTA
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHH
IFGMALAFAESSLAIKYREIDENGRINGGPMYYIKKGLGKNWTWLAAIFCVGTLLSATAT
HHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
GGMIQANSLTANIHSAFSDGGIGIPLWLLGIVLAGLVFAVIVGGIKSIGRVAGSLVPAMA
CCEEEECCEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALYILACLIILLLNIQYIPGAFGMIFSSAFGLNQAAGGLAGYAVLSAIRFGVARGLFSNE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCC
AGQGSAPIAHAASQMKNPAKQGEIAMIGVFIDTMVLCTMTALVILTAEGSWATAEQFKQW
CCCCCCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHH
AGETTTHVWMAEGSNPATLTNQAFTDAVPGPVGGWLVTLCLTLFAFTTIIGWSYYAEQAV
CCCCEEEEEEECCCCCCEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFLVGEWATKPFRYIWVVIIFIGAMAEVNIVWLFGDIANASMAFPNLIAILLLSGVVYGI
HHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEH
HKSNGDPDTADGDSILEDLRIKETPAE
CCCCCCCCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]