| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is mdmB [H]
Identifier: 114798644
GI number: 114798644
Start: 2844834
End: 2845994
Strand: Direct
Name: mdmB [H]
Synonym: HNE_2684
Alternate gene names: 114798644
Gene position: 2844834-2845994 (Clockwise)
Preceding gene: 114798094
Following gene: 114797823
Centisome position: 76.78
GC content: 57.88
Gene sequence:
>1161_bases ATGGACGATAGTAAACCCGCCGGTATTCTCCACACTCAGGCGCTGAATTCAGCACCGCAGGGGCCGAGATTCATTGTGCT CGATGCAGTGCGTGGGATCGGCGCTTTGCTGGTGATTTTCGGGCATTATCACTTCGAACTCTGGCCGGAAGTGAACAGTT TCATCATCAGCTCCAGCGGTCACCTGGTGGTCGATGTCTTCTTCCTGCTGTCCGGGTTCGTTCTGGCACACGCCTTCTAT GACAAGCCGAGCTTCAATTTCTGGGAATACGCCAAAAAGCGCGTTTTCCGTCTCTGGCCCCTGCACGTTGTCACTTTTAT CGCCTGCGCCGTCATCATGTTCTGGGCCGGCGACCCGATCAGTGAAAAAGGACTGCTGCTGAACTTCGTCCTGCTCCACA ATATCGGCATCGGCGACTGGTCCACGAACAGCTTCAACTACCCTTCCTGGTCCCTGTCGGTTGAGCTTGTGGCAAATATG GTGGTGGGCCTGATCATCCTGGCGATCCCCAATCGCCGCTGGAACAGCGCCATCCTGGCGGGGCTGATCCTCCTCAGCGC CACAATTCTTTTCTTTACGGTCGAAAACCTCGATCAGCATGCCCGCAATGTCCTCGGCGTGGTGAATACGGGCCTGCTGC GCGGCTTCATATCCTTCCCGCTCGGCATTCTGGCCTATCGGTTCTTTACCACTCACAGGGCGTGGTTTGACCGCACGTCC GTCCTGCGCAGCATATGGATCGGCTTTCTGGCCGTCGTCCTTCTGGCAACATTCTGCCTGCCGGTCGCAAACCGGGTCGA TTTCCTCTACCTGCCATTCTACGCGTTCATGATCATGGTTCTCGCCAGCCCCGGCGCTTTCTGGGAAGGCGTTCTCAGCC GCTTCAGAATTCTCGGCACGCTGTCCTTCGCCATGTATGTGGTTCACATGATCGTTTTGAAGATCATGGAACAGATCCCC TTCTGGCCGCAGGAATATGTCGCCGGGCTGTTCGTCGCCTGGGCGCTGTCGATCGCGCTGGCCGCGTTTGCCCACTACAA GATTGAGCGGCCCAGCTACGCCTGGCTGACCCGGCATATGTCGAACCCGCCTGCCGGAAACAGCCTGCCGGAAATCCTCC AGCGCAAGCTTGCGCGGCCCACCCCTTCGAGCGCCGAATAA
Upstream 100 bases:
>100_bases GACCCGCACATTTTTGCATTGTAAATTTACCCAACTGATAGATGGCACATGTCTTGCTGAAGATGAAGATTAGCCGGCCG TCTGAGGAACCCCGTTAAGT
Downstream 100 bases:
>100_bases AGTCCGGATTGGAAAAGCACCCCTGCGGGGTAAAGAGGCCGCCGCCGGCGGCGTGCTGCAGGGGTGGTGGAGGGAGCTGG ATTCGAACCAGCGTACGCTA
Product: acyltransferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MDDSKPAGILHTQALNSAPQGPRFIVLDAVRGIGALLVIFGHYHFELWPEVNSFIISSSGHLVVDVFFLLSGFVLAHAFY DKPSFNFWEYAKKRVFRLWPLHVVTFIACAVIMFWAGDPISEKGLLLNFVLLHNIGIGDWSTNSFNYPSWSLSVELVANM VVGLIILAIPNRRWNSAILAGLILLSATILFFTVENLDQHARNVLGVVNTGLLRGFISFPLGILAYRFFTTHRAWFDRTS VLRSIWIGFLAVVLLATFCLPVANRVDFLYLPFYAFMIMVLASPGAFWEGVLSRFRILGTLSFAMYVVHMIVLKIMEQIP FWPQEYVAGLFVAWALSIALAAFAHYKIERPSYAWLTRHMSNPPAGNSLPEILQRKLARPTPSSAE
Sequences:
>Translated_386_residues MDDSKPAGILHTQALNSAPQGPRFIVLDAVRGIGALLVIFGHYHFELWPEVNSFIISSSGHLVVDVFFLLSGFVLAHAFY DKPSFNFWEYAKKRVFRLWPLHVVTFIACAVIMFWAGDPISEKGLLLNFVLLHNIGIGDWSTNSFNYPSWSLSVELVANM VVGLIILAIPNRRWNSAILAGLILLSATILFFTVENLDQHARNVLGVVNTGLLRGFISFPLGILAYRFFTTHRAWFDRTS VLRSIWIGFLAVVLLATFCLPVANRVDFLYLPFYAFMIMVLASPGAFWEGVLSRFRILGTLSFAMYVVHMIVLKIMEQIP FWPQEYVAGLFVAWALSIALAAFAHYKIERPSYAWLTRHMSNPPAGNSLPEILQRKLARPTPSSAE >Mature_386_residues MDDSKPAGILHTQALNSAPQGPRFIVLDAVRGIGALLVIFGHYHFELWPEVNSFIISSSGHLVVDVFFLLSGFVLAHAFY DKPSFNFWEYAKKRVFRLWPLHVVTFIACAVIMFWAGDPISEKGLLLNFVLLHNIGIGDWSTNSFNYPSWSLSVELVANM VVGLIILAIPNRRWNSAILAGLILLSATILFFTVENLDQHARNVLGVVNTGLLRGFISFPLGILAYRFFTTHRAWFDRTS VLRSIWIGFLAVVLLATFCLPVANRVDFLYLPFYAFMIMVLASPGAFWEGVLSRFRILGTLSFAMYVVHMIVLKIMEQIP FWPQEYVAGLFVAWALSIALAAFAHYKIERPSYAWLTRHMSNPPAGNSLPEILQRKLARPTPSSAE
Specific function: Catalyzes the acylation of the mycaminose sugar during midecamycin biosynthesis [H]
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 43470; Mature: 43470
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDSKPAGILHTQALNSAPQGPRFIVLDAVRGIGALLVIFGHYHFELWPEVNSFIISSSG CCCCCCCCCEEHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHEEECCCHHHEEECCCC HLVVDVFFLLSGFVLAHAFYDKPSFNFWEYAKKRVFRLWPLHVVTFIACAVIMFWAGDPI CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SEKGLLLNFVLLHNIGIGDWSTNSFNYPSWSLSVELVANMVVGLIILAIPNRRWNSAILA CCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GLILLSATILFFTVENLDQHARNVLGVVNTGLLRGFISFPLGILAYRFFTTHRAWFDRTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLRSIWIGFLAVVLLATFCLPVANRVDFLYLPFYAFMIMVLASPGAFWEGVLSRFRILGT HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LSFAMYVVHMIVLKIMEQIPFWPQEYVAGLFVAWALSIALAAFAHYKIERPSYAWLTRHM HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC SNPPAGNSLPEILQRKLARPTPSSAE CCCCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDDSKPAGILHTQALNSAPQGPRFIVLDAVRGIGALLVIFGHYHFELWPEVNSFIISSSG CCCCCCCCCEEHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHEEECCCHHHEEECCCC HLVVDVFFLLSGFVLAHAFYDKPSFNFWEYAKKRVFRLWPLHVVTFIACAVIMFWAGDPI CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SEKGLLLNFVLLHNIGIGDWSTNSFNYPSWSLSVELVANMVVGLIILAIPNRRWNSAILA CCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GLILLSATILFFTVENLDQHARNVLGVVNTGLLRGFISFPLGILAYRFFTTHRAWFDRTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLRSIWIGFLAVVLLATFCLPVANRVDFLYLPFYAFMIMVLASPGAFWEGVLSRFRILGT HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LSFAMYVVHMIVLKIMEQIPFWPQEYVAGLFVAWALSIALAAFAHYKIERPSYAWLTRHM HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC SNPPAGNSLPEILQRKLARPTPSSAE CCCCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1629172 [H]