Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114798094

Identifier: 114798094

GI number: 114798094

Start: 2837112

End: 2837795

Strand: Direct

Name: 114798094

Synonym: HNE_2676

Alternate gene names: NA

Gene position: 2837112-2837795 (Clockwise)

Preceding gene: 114798840

Following gene: 114798644

Centisome position: 76.57

GC content: 62.72

Gene sequence:

>684_bases
TTGATTGCGGCGACGCTGACACTCAGCGCCTGCGCCATACATCCCAGTACCGACGCGGCAAGCTTTGCGGCGCGGACAGA
CAGCAACAGTTTCGAGATGTTCAGCGGCGCCGTTTCGCCGCCTGAAACGCTCCTGCTTCCTGTCGAGCATGACCAACAGA
TCAACGGCATAGCCTGCGGCGCCCACGCGCTCGCCAGCCTCGTGAATTACTGGCACGGCGCGGGCACGGTCGCCGGAACC
GAAATCTTCGCCACCTATCCGCCCGCTGATCAGACAACGGGTTATGCGATGTCGGAGCTTTTACAGCTGGCCGAAACCCA
GAATCTCGTGAGCAGTGCCGTCCGCCTGCCAGACGAAGGCCTCAAGGCCGAGCTTGAAGCCGGCCGCCCTGTGCTGGTGC
CGGTCGAAGTGCCCTCGATCTTCGTCCAGACATGGCAACTGCCCGGCATGAACGTGCCGGTGCTGGGCCTGCCCGCCGAG
TTCATTACCTCACGCGCTGCCTGGCTGTCGGAGAAGACCAACAGCAATCTGCTTAATCACTATGTGCTGGTGTCCGGATA
TGACGGCGACACCTTCATCGTGATGGAGCCCGTGATGGGCCTGCGCACGATCAGCGCCGAACGCCTCGCGCGTTACCGAG
CCCCCTTCGGCAACGCCGCGATCGTGTTCAGCAAACCGGCCTAG

Upstream 100 bases:

>100_bases
ATACACCGGCGGTATGACCACCAACAACGTTCTGGCCATTGTCGGCCTGGTCGCCATCGTCGTGGTTGTGGCGTCCGTTC
TGTAAATGAGAGTGCAGGCG

Downstream 100 bases:

>100_bases
CCGCCAAACGCATAGACCAGAGACACACGCGTTGCTGTATCGGTCGGCTCAAAGCCGGACTGTGGGTCGGTCTCATGGCG
CACCTCAAACGACACCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MIAATLTLSACAIHPSTDAASFAARTDSNSFEMFSGAVSPPETLLLPVEHDQQINGIACGAHALASLVNYWHGAGTVAGT
EIFATYPPADQTTGYAMSELLQLAETQNLVSSAVRLPDEGLKAELEAGRPVLVPVEVPSIFVQTWQLPGMNVPVLGLPAE
FITSRAAWLSEKTNSNLLNHYVLVSGYDGDTFIVMEPVMGLRTISAERLARYRAPFGNAAIVFSKPA

Sequences:

>Translated_227_residues
MIAATLTLSACAIHPSTDAASFAARTDSNSFEMFSGAVSPPETLLLPVEHDQQINGIACGAHALASLVNYWHGAGTVAGT
EIFATYPPADQTTGYAMSELLQLAETQNLVSSAVRLPDEGLKAELEAGRPVLVPVEVPSIFVQTWQLPGMNVPVLGLPAE
FITSRAAWLSEKTNSNLLNHYVLVSGYDGDTFIVMEPVMGLRTISAERLARYRAPFGNAAIVFSKPA
>Mature_227_residues
MIAATLTLSACAIHPSTDAASFAARTDSNSFEMFSGAVSPPETLLLPVEHDQQINGIACGAHALASLVNYWHGAGTVAGT
EIFATYPPADQTTGYAMSELLQLAETQNLVSSAVRLPDEGLKAELEAGRPVLVPVEVPSIFVQTWQLPGMNVPVLGLPAE
FITSRAAWLSEKTNSNLLNHYVLVSGYDGDTFIVMEPVMGLRTISAERLARYRAPFGNAAIVFSKPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24161; Mature: 24161

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAATLTLSACAIHPSTDAASFAARTDSNSFEMFSGAVSPPETLLLPVEHDQQINGIACG
CEEEEEEEEEEEECCCCCCHHHHCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCEEHH
AHALASLVNYWHGAGTVAGTEIFATYPPADQTTGYAMSELLQLAETQNLVSSAVRLPDEG
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
LKAELEAGRPVLVPVEVPSIFVQTWQLPGMNVPVLGLPAEFITSRAAWLSEKTNSNLLNH
CEEHHCCCCEEEEEECCCCEEEEEECCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCEEE
YVLVSGYDGDTFIVMEPVMGLRTISAERLARYRAPFGNAAIVFSKPA
EEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MIAATLTLSACAIHPSTDAASFAARTDSNSFEMFSGAVSPPETLLLPVEHDQQINGIACG
CEEEEEEEEEEEECCCCCCHHHHCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCEEHH
AHALASLVNYWHGAGTVAGTEIFATYPPADQTTGYAMSELLQLAETQNLVSSAVRLPDEG
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
LKAELEAGRPVLVPVEVPSIFVQTWQLPGMNVPVLGLPAEFITSRAAWLSEKTNSNLLNH
CEEHHCCCCEEEEEECCCCEEEEEECCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCEEE
YVLVSGYDGDTFIVMEPVMGLRTISAERLARYRAPFGNAAIVFSKPA
EEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA