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The map label for this gene is prfB

Identifier: 114798643

GI number: 114798643

Start: 1982462

End: 1982530

Strand: Direct

Name: prfB

Synonym: HNE_1912

Alternate gene names: NA

Gene position: 1982462-1982530 (Clockwise)

Preceding gene: 114797913

Following gene: 114798604

Centisome position: 53.51

GC content: 55.07

Gene sequence:

>1108_bases
ATGTCCGCAGAAATCCGTTCGCTGATCGAAAAGATCGAAAGTTCCGCCGCCCTGCTACGGAGGCGTCTTTGACTGGGATA
CAGCCACAAAACGCCTTGATGAGCTGACCGCCCTTTCCGAACGCCCCAACTTCTGGGACGACCCGCAGGAAGCGCAGGCC
ATGATGCGCGAGCGCCAGAAGCTCGCCGATGGTATCGCGCTGGTGCAAACCCTTGAAAAAGACGTGGCCGATGCGCCCGA
GCTGATGGAGCTCGCCGAAGGCGACGCCAGTATGCTGGCAGACCTGGAAGCCACCCTTCGCCGCGCTGCCGCGCGCGCCG
CCGAAGCCGAACTCGCCGCGCTCCTCTCGGGCGAAGCAGACGGCAACGACTGCTACCTGCAGATCAATGCAGGCGAAGGC
GGCACGGAAAGCCAGGACTGGGCCTCCATCCTGCGCCGCATGTATGTCCGCTGGGCCGAGAAGCGCGGCTATGGCGTTGA
GCTTCTGGATGAGCGCGACGGCGAAGAAGCAGGCATCAAATCCGCAACATTGCAGATCAAGGGCGAAAACGCTTATGGCT
GGCTGAAGTCCGAACAGGGCGTCCACAGGCTGGTGCGCATTTCGCCGTTCGACTCCTCCGCCCGCCGGCACACCTCTTTC
TCTTCCGTGGCGGTCTCTCCCGTCATCGACGACAAGATTGATGTCGAAATCAATCCATCGGATGTCCGTACAGACACATA
TCGCGCATCTGGCGCAGGGGGTCAGCACGTCAACCGGACGGACTCCGCCGTCCGCCTCACGCACATCCCGACGAACACCG
TCGTCCAGTGCCAGGCCGGCCGCTCGCAGCACCAGAACCGCGATGAAGCGTGGAAGATGCTACGCTCGAAACTCTACGAA
CTGGAATTGCAGAAACGCAGGGCCGTGGCCGATGCTCAGTATGCCGACAAGAGCGCAATCGGATTTGGCCACCAGATCCG
CTCTTACGTTCTCCAGCCCTACCAGATGGTCAAGGATCTCCGCACCGAGGTCGAAACCTCAGACACATCCGGTGTTCTTG
ACGGTGATATTGACCGTTTCCTCTCTGCGGCGCTGGCCGCATCGGTAAGCAAGGACCAGGACGCATGA

Upstream 100 bases:

>100_bases
CTTCTAGCGCGACAAACGCAGCTTTGACCCCATGCGGCGGCCCGGTTATAGGGTCCGCAGATACTTGCTTCTTTCAATCT
TAAATTACAAAAGGTTCATC

Downstream 100 bases:

>100_bases
CCAAGCCAGCGGAGCCTCGCGCCTTCTCTGAAAGCAGTCCTCGTCAGGAGGGTCACCTTTCCGGCTGGAACGAGGCTCGC
GGCTTCGGCTTTCTGAAGGC

Product: peptide chain release factor 2, programmed frameshift

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 23; Mature: 22

Protein sequence:

>368_residues
MSAEIRSLIEKIESSAALLRRRLDWDTATKRLDELTALSERPNFWDDPQEAQAMMRERQKLADGIALVQTLEKDVADAPE
LMELAEGDASMLADLEATLRRAAARAAEAELAALLSGEADGNDCYLQINAGEGGTESQDWASILRRMYVRWAEKRGYGVE
LLDERDGEEAGIKSATLQIKGENAYGWLKSEQGVHRLVRISPFDSSARRHTSFSSVAVSPVIDDKIDVEINPSDVRTDTY
RASGAGGQHVNRTDSAVRLTHIPTNTVVQCQAGRSQHQNRDEAWKMLRSKLYELELQKRRAVADAQYADKSAIGFGHQIR
SYVLQPYQMVKDLRTEVETSDTSGVLDGDIDRFLSAALAASVSKDQDA

Sequences:

>Translated_23_residues
MSAEIRSLIEKIESSAALLRRRL
>Mature_22_residues
SAEIRSLIEKIESSAALLRRRL

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 2643; Mature: 2512

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEIRSLIEKIESSAALLRRRL
CCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAEIRSLIEKIESSAALLRRRL
CHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA