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The map label for this gene is viuA [H]

Identifier: 114798509

GI number: 114798509

Start: 1288277

End: 1290862

Strand: Reverse

Name: viuA [H]

Synonym: HNE_1261

Alternate gene names: 114798509

Gene position: 1290862-1288277 (Counterclockwise)

Preceding gene: 114797551

Following gene: 114798158

Centisome position: 34.84

GC content: 60.52

Gene sequence:

>2586_bases
ATGAAACGTCAAAAACCCTTTAGTCGTATTGTATTCGGCGGTGCCTCGGCGCTGGCCATCACCCTGGCCGCGCCCGCGCT
CGCGCAGGAAACAACGGCCCCGGAAGCCGCGCCTGCCGCAACCGAGAGCCCGTCTTCTGAGTCCGACCTGAAACTCGGCT
CGATCACCGTCACCGCCAACCGCCGCGAAGAGTCCGCCCAGGATGTTCCGATGGCGATCCAGGCGTTCGGCGAAGACACG
CTGAGCCAGCTCCAGATCAACTCGGTCGAAGACCTCAGCTCGGTCGTCCCCGGCTTTAACGTGTCGCAGTCCTATCAGGG
CGTGCCCACCTACACGCTGCGCGGCATCGGCTTCAACACGATCAACCTCTCGGCCACCTCCACCGTCGGTACCTATGTCG
ACGAGGTCGCCTACCCCTATCCGTTCATGAACTCCGGCCCGGTCTTTGACGTTTCGCGCGTCGAGGTTCTCAAAGGTCCG
CAGGGCACGCTGTTCGGCCGCAACACCACCGCCGGCCTGATCAACGTCGTCACCAACAAGCCGGTCGACGAATTCCAGGC
CAGCGCAAAAGCCGAAGTCGGCAATTACGACACCTGGAACCTCGAAGGCATGGTCAACCTGCCGGTCTCCGACACCATTC
AGGCCCGCTTCGCTGTCCGCAGCGAAAACAGCGATGAAGGCTGGCAGCGTTCGATCAGCCGTCCGGACGAAGATCGCGGC
ACGGTCGAGAAGCTCGGCTTCCGCGCCGCAGTGGCCCTTCAGCCGTCTGACAAGCTGGACGTGAACCTCAGCTATAATGG
CTGGATCAACAAATCCGATACGATCGCCGGACAGGGCATCGGCCTCACGCCGAGCACCGACCCGACCTTCATCGTTCCGG
GCACGAACGGCCCGTCCACGACCTCCGGCTTCAATGCACCGGGCCTCGTCGACTATATCCAGAACAACCAGCCCACCAGC
GCCGAAGATGCGGACTGGGTGCCTTACAATATCCGTGCGGCCACCATTGGCGGCGTTCCGGGCATGACAGACGACAACAA
GGAAGACGCCAGCTTCCACGCCTTCCGGGCCGGCATCAACTACACCTTCGACAACGACCTGACCCTCGTTTCGCTTACCG
GCTATAACAAGCTCGAGCGTGAAGCGATCCTCGACTTCTCGGGCGCGCCCTATCAGATCCTGAACCAGGACATTGATGGC
GAAATCACCTCGTTCAGCCAGGAACTTCGCCTCGAAGGTCAGACCGACCGGGCAAACTGGCTCGTCGGCGCCTATTACGG
CAAGGATGAGACGACCGACACCAACCGCACCATGCTGCGGGACAATGCCAACTCGAACTTCATTTCGACGGCGGCTTATT
TGTTGACGGTTGATCCAACTGCACTGGGCTTTCCGCCCGAAACTGCCGGCCTCGTCGCACTCGTCAACCGCGACCCGGAA
ACCGGACAACCCTATACAGCCGCAGAGCTGCTCAACTCGTTCCAGACCTATCGCGACAGCGGTGATTTTGAAACGACCAC
CCAGAGCATCTTCGCGAATGTGGACTGGGAACTGACCCCGGAGTTCTCGCTGACCACCGGCGTGCGTTACACGGAAGACG
AGCAGCAATATGTGGGTTGCTCGGCAGATGTGAACGGCTCGATGCAGCCGAACGTCAACGTGTTCAACCGCGTTTTCTTC
ACCGGCATCTACGGCCTCTCCGCGCCGCCGCCTGCCCTTCTGGAAAACGGCTGCAACACCTATGATCTGACCACCAACAC
CTTCGGTCCGGTCGAATCCGACACGAAAGAAGACAATGTCAGCTGGCGGATCGCCGGTAACTGGACACCGTCCGACAACA
TGCTCCTCTTCGCGTCGGTAACGCAGGGCTACAAGTCGGCCTCGACCCCGGTGAACGCCGCATCGAAGTCCGAGCAGAAC
GCCCCGGCAACGCAGGAAAGCCTGCTCGCCTATGAAGCCGGTGTGAAGGCTCAGCTGTTCAACCAGCGCCTCCAGACCAA
CGCCTCGGTCTTCTTCTATGACTATGAAGACAAGCAGGTTGCTTCCTTCTTCCCGGACCCGATCTACCGCGCTCTTTCGC
GCCTCCAGAACGTTCCGAAGTCGGAAGCCTATGGTTTCGAGACCGAAGTCACCTGGCTGATCAACGAAAACCTCACCGCG
ATGGGCGGCCTCACGCTGCTGCAAACGGAGATCAAGGAATTCGACACCTCCGACAGCTTCGGCCTTCCGACCAGCCGCGC
CGGCGATCCGTTCCTCTACAGCCCGGAAACCAGCGCAAGCCTGGCCCTGCTCTATGACCGGCCTCTGAACGAGACCTATG
GCATGCGCAGCACGCTGAGCGGCCGCTGGCAGAGCGATTCGACAGCAGGTGATCCGAACGATCCCTTCTACGACATCGAC
TCCTACGGCACCCTCAATGGCTCGATCAGCCTCTACACGCTGAACGACAGCTGGGAACTCTCCCTCTGGGGCCAGAACCT
GACGGATGAGTATTACATCACGCAGGTTACATCGAACGCAAACGTCGTCCTGCGCTATGCAGGCAAACCACGCACCTACG
GGGCATCGCTCTCGTATCGCTTCTAG

Upstream 100 bases:

>100_bases
ACACTATCATTTTCGATAGCTTGTGCGACGCCCCCGCATGCTGACACCGTGACACTAATAAGTCTGCCGACCTCCCAGAG
CAGACGTTGCGGAGGAATCC

Downstream 100 bases:

>100_bases
GCGCATACTTCCTGGGAAGGCCGCAACCCACACCGGGTTGCGGCCCTTTTTTTATCTGCTTACAGACAATTCCATCTGCC
CTGTCCGGCCACCGTCATTG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 861; Mature: 861

Protein sequence:

>861_residues
MKRQKPFSRIVFGGASALAITLAAPALAQETTAPEAAPAATESPSSESDLKLGSITVTANRREESAQDVPMAIQAFGEDT
LSQLQINSVEDLSSVVPGFNVSQSYQGVPTYTLRGIGFNTINLSATSTVGTYVDEVAYPYPFMNSGPVFDVSRVEVLKGP
QGTLFGRNTTAGLINVVTNKPVDEFQASAKAEVGNYDTWNLEGMVNLPVSDTIQARFAVRSENSDEGWQRSISRPDEDRG
TVEKLGFRAAVALQPSDKLDVNLSYNGWINKSDTIAGQGIGLTPSTDPTFIVPGTNGPSTTSGFNAPGLVDYIQNNQPTS
AEDADWVPYNIRAATIGGVPGMTDDNKEDASFHAFRAGINYTFDNDLTLVSLTGYNKLEREAILDFSGAPYQILNQDIDG
EITSFSQELRLEGQTDRANWLVGAYYGKDETTDTNRTMLRDNANSNFISTAAYLLTVDPTALGFPPETAGLVALVNRDPE
TGQPYTAAELLNSFQTYRDSGDFETTTQSIFANVDWELTPEFSLTTGVRYTEDEQQYVGCSADVNGSMQPNVNVFNRVFF
TGIYGLSAPPPALLENGCNTYDLTTNTFGPVESDTKEDNVSWRIAGNWTPSDNMLLFASVTQGYKSASTPVNAASKSEQN
APATQESLLAYEAGVKAQLFNQRLQTNASVFFYDYEDKQVASFFPDPIYRALSRLQNVPKSEAYGFETEVTWLINENLTA
MGGLTLLQTEIKEFDTSDSFGLPTSRAGDPFLYSPETSASLALLYDRPLNETYGMRSTLSGRWQSDSTAGDPNDPFYDID
SYGTLNGSISLYTLNDSWELSLWGQNLTDEYYITQVTSNANVVLRYAGKPRTYGASLSYRF

Sequences:

>Translated_861_residues
MKRQKPFSRIVFGGASALAITLAAPALAQETTAPEAAPAATESPSSESDLKLGSITVTANRREESAQDVPMAIQAFGEDT
LSQLQINSVEDLSSVVPGFNVSQSYQGVPTYTLRGIGFNTINLSATSTVGTYVDEVAYPYPFMNSGPVFDVSRVEVLKGP
QGTLFGRNTTAGLINVVTNKPVDEFQASAKAEVGNYDTWNLEGMVNLPVSDTIQARFAVRSENSDEGWQRSISRPDEDRG
TVEKLGFRAAVALQPSDKLDVNLSYNGWINKSDTIAGQGIGLTPSTDPTFIVPGTNGPSTTSGFNAPGLVDYIQNNQPTS
AEDADWVPYNIRAATIGGVPGMTDDNKEDASFHAFRAGINYTFDNDLTLVSLTGYNKLEREAILDFSGAPYQILNQDIDG
EITSFSQELRLEGQTDRANWLVGAYYGKDETTDTNRTMLRDNANSNFISTAAYLLTVDPTALGFPPETAGLVALVNRDPE
TGQPYTAAELLNSFQTYRDSGDFETTTQSIFANVDWELTPEFSLTTGVRYTEDEQQYVGCSADVNGSMQPNVNVFNRVFF
TGIYGLSAPPPALLENGCNTYDLTTNTFGPVESDTKEDNVSWRIAGNWTPSDNMLLFASVTQGYKSASTPVNAASKSEQN
APATQESLLAYEAGVKAQLFNQRLQTNASVFFYDYEDKQVASFFPDPIYRALSRLQNVPKSEAYGFETEVTWLINENLTA
MGGLTLLQTEIKEFDTSDSFGLPTSRAGDPFLYSPETSASLALLYDRPLNETYGMRSTLSGRWQSDSTAGDPNDPFYDID
SYGTLNGSISLYTLNDSWELSLWGQNLTDEYYITQVTSNANVVLRYAGKPRTYGASLSYRF
>Mature_861_residues
MKRQKPFSRIVFGGASALAITLAAPALAQETTAPEAAPAATESPSSESDLKLGSITVTANRREESAQDVPMAIQAFGEDT
LSQLQINSVEDLSSVVPGFNVSQSYQGVPTYTLRGIGFNTINLSATSTVGTYVDEVAYPYPFMNSGPVFDVSRVEVLKGP
QGTLFGRNTTAGLINVVTNKPVDEFQASAKAEVGNYDTWNLEGMVNLPVSDTIQARFAVRSENSDEGWQRSISRPDEDRG
TVEKLGFRAAVALQPSDKLDVNLSYNGWINKSDTIAGQGIGLTPSTDPTFIVPGTNGPSTTSGFNAPGLVDYIQNNQPTS
AEDADWVPYNIRAATIGGVPGMTDDNKEDASFHAFRAGINYTFDNDLTLVSLTGYNKLEREAILDFSGAPYQILNQDIDG
EITSFSQELRLEGQTDRANWLVGAYYGKDETTDTNRTMLRDNANSNFISTAAYLLTVDPTALGFPPETAGLVALVNRDPE
TGQPYTAAELLNSFQTYRDSGDFETTTQSIFANVDWELTPEFSLTTGVRYTEDEQQYVGCSADVNGSMQPNVNVFNRVFF
TGIYGLSAPPPALLENGCNTYDLTTNTFGPVESDTKEDNVSWRIAGNWTPSDNMLLFASVTQGYKSASTPVNAASKSEQN
APATQESLLAYEAGVKAQLFNQRLQTNASVFFYDYEDKQVASFFPDPIYRALSRLQNVPKSEAYGFETEVTWLINENLTA
MGGLTLLQTEIKEFDTSDSFGLPTSRAGDPFLYSPETSASLALLYDRPLNETYGMRSTLSGRWQSDSTAGDPNDPFYDID
SYGTLNGSISLYTLNDSWELSLWGQNLTDEYYITQVTSNANVVLRYAGKPRTYGASLSYRF

Specific function: Receptor for ferric vibriobactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug [H]

EC number: NA

Molecular weight: Translated: 93914; Mature: 93914

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRQKPFSRIVFGGASALAITLAAPALAQETTAPEAAPAATESPSSESDLKLGSITVTAN
CCCCCCCHHEEECCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEC
RREESAQDVPMAIQAFGEDTLSQLQINSVEDLSSVVPGFNVSQSYQGVPTYTLRGIGFNT
CCCCCCCCCCHHHHHHCHHHHHHEECCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEE
INLSATSTVGTYVDEVAYPYPFMNSGPVFDVSRVEVLKGPQGTLFGRNTTAGLINVVTNK
EEEEECCHHHHHHHHHCCCCCCCCCCCEEECCHHHEEECCCCCEEECCCCCEEEEEECCC
PVDEFQASAKAEVGNYDTWNLEGMVNLPVSDTIQARFAVRSENSDEGWQRSISRPDEDRG
CHHHHHHHHHCCCCCCCEEECCEEEECCCCCCEEEEEEEECCCCCHHHHHHCCCCCCCCC
TVEKLGFRAAVALQPSDKLDVNLSYNGWINKSDTIAGQGIGLTPSTDPTFIVPGTNGPST
HHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
TSGFNAPGLVDYIQNNQPTSAEDADWVPYNIRAATIGGVPGMTDDNKEDASFHAFRAGIN
CCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCC
YTFDNDLTLVSLTGYNKLEREAILDFSGAPYQILNQDIDGEITSFSQELRLEGQTDRANW
EEECCCEEEEEECCCCHHHHHHHCCCCCCCHHHHCCCCCCHHHHCHHHHEECCCCCCCCE
LVGAYYGKDETTDTNRTMLRDNANSNFISTAAYLLTVDPTALGFPPETAGLVALVNRDPE
EEEEEECCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCHHCCCCCCCCCEEEEEECCCC
TGQPYTAAELLNSFQTYRDSGDFETTTQSIFANVDWELTPEFSLTTGVRYTEDEQQYVGC
CCCCCHHHHHHHHHHHHCCCCCCCCCCHHHEEECCEEECCCEEEECCCEECCCCHHEECC
SADVNGSMQPNVNVFNRVFFTGIYGLSAPPPALLENGCNTYDLTTNTFGPVESDTKEDNV
CCCCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCE
SWRIAGNWTPSDNMLLFASVTQGYKSASTPVNAASKSEQNAPATQESLLAYEAGVKAQLF
EEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHH
NQRLQTNASVFFYDYEDKQVASFFPDPIYRALSRLQNVPKSEAYGFETEVTWLINENLTA
HHHHHCCCEEEEEECCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCH
MGGLTLLQTEIKEFDTSDSFGLPTSRAGDPFLYSPETSASLALLYDRPLNETYGMRSTLS
HCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCHHHCC
GRWQSDSTAGDPNDPFYDIDSYGTLNGSISLYTLNDSWELSLWGQNLTDEYYITQVTSNA
CCCCCCCCCCCCCCCCEECCCCCEECCEEEEEEECCCEEEEECCCCCCCCEEEEEEECCC
NVVLRYAGKPRTYGASLSYRF
CEEEEECCCCCCCCCCEEECC
>Mature Secondary Structure
MKRQKPFSRIVFGGASALAITLAAPALAQETTAPEAAPAATESPSSESDLKLGSITVTAN
CCCCCCCHHEEECCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEC
RREESAQDVPMAIQAFGEDTLSQLQINSVEDLSSVVPGFNVSQSYQGVPTYTLRGIGFNT
CCCCCCCCCCHHHHHHCHHHHHHEECCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEE
INLSATSTVGTYVDEVAYPYPFMNSGPVFDVSRVEVLKGPQGTLFGRNTTAGLINVVTNK
EEEEECCHHHHHHHHHCCCCCCCCCCCEEECCHHHEEECCCCCEEECCCCCEEEEEECCC
PVDEFQASAKAEVGNYDTWNLEGMVNLPVSDTIQARFAVRSENSDEGWQRSISRPDEDRG
CHHHHHHHHHCCCCCCCEEECCEEEECCCCCCEEEEEEEECCCCCHHHHHHCCCCCCCCC
TVEKLGFRAAVALQPSDKLDVNLSYNGWINKSDTIAGQGIGLTPSTDPTFIVPGTNGPST
HHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
TSGFNAPGLVDYIQNNQPTSAEDADWVPYNIRAATIGGVPGMTDDNKEDASFHAFRAGIN
CCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCC
YTFDNDLTLVSLTGYNKLEREAILDFSGAPYQILNQDIDGEITSFSQELRLEGQTDRANW
EEECCCEEEEEECCCCHHHHHHHCCCCCCCHHHHCCCCCCHHHHCHHHHEECCCCCCCCE
LVGAYYGKDETTDTNRTMLRDNANSNFISTAAYLLTVDPTALGFPPETAGLVALVNRDPE
EEEEEECCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCHHCCCCCCCCCEEEEEECCCC
TGQPYTAAELLNSFQTYRDSGDFETTTQSIFANVDWELTPEFSLTTGVRYTEDEQQYVGC
CCCCCHHHHHHHHHHHHCCCCCCCCCCHHHEEECCEEECCCEEEECCCEECCCCHHEECC
SADVNGSMQPNVNVFNRVFFTGIYGLSAPPPALLENGCNTYDLTTNTFGPVESDTKEDNV
CCCCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCE
SWRIAGNWTPSDNMLLFASVTQGYKSASTPVNAASKSEQNAPATQESLLAYEAGVKAQLF
EEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHH
NQRLQTNASVFFYDYEDKQVASFFPDPIYRALSRLQNVPKSEAYGFETEVTWLINENLTA
HHHHHCCCEEEEEECCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCH
MGGLTLLQTEIKEFDTSDSFGLPTSRAGDPFLYSPETSASLALLYDRPLNETYGMRSTLS
HCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCHHHCC
GRWQSDSTAGDPNDPFYDIDSYGTLNGSISLYTLNDSWELSLWGQNLTDEYYITQVTSNA
CCCCCCCCCCCCCCCCEECCCCCEECCEEEEEEECCCEEEEECCCCCCCCEEEEEEECCC
NVVLRYAGKPRTYGASLSYRF
CEEEEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1317381 [H]