| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798393
Identifier: 114798393
GI number: 114798393
Start: 1119653
End: 1120474
Strand: Direct
Name: 114798393
Synonym: HNE_1112
Alternate gene names: NA
Gene position: 1119653-1120474 (Clockwise)
Preceding gene: 114799088
Following gene: 114799050
Centisome position: 30.22
GC content: 60.71
Gene sequence:
>822_bases ATGTTCCGATCTGTCCTTTCCGGTTTTGCGCTGCTTCTCGTGGCTTGTAGCTCAGTGGGTGAACCGGCGCCGGAAGCGGA AGTGAGCGACGCAGATGTCTTCCGCAACTGGGTCGAGGCGCGGGCGGGTACGGGCGAGGCGGTTCATTGGGTTTCAGAAG GGGCGGTTTATGCCTATCCTTCGGGCGAGAAGATCCTCGGCATGAAGGGGTTTGACAGTTCGAAGGTGATCTGGCCGGAG GGGGATGAGGGCGAGGTGATCCACCTCACCCGCAAGACCTTCACCTATACAGACCCGGTAACGGGCGCGTTCCTGACAGA GTTCAACGGTCAGAAGGTCGTGCCGATTGCCTATCCCTATCAGTTGATCCGTTACCGGATGAAAGACGGATTGATCTTTG CCGATGTCGAACAGGGGGTGGAGCCGCGCGTGCAGAATATTGCCGCGAAAGACGGGATCATATCACGCAAGGTGGGCGAC AGCTGGGCCTTTACGGCGCCGCTGTTCCTGAACTTCCCATTGCCGGGCGGGGGCCAATATGAGGCCTGGGAGAATTATGA CTTCTTCATCCATCCTGAAGGCAGCATCAGCGAGCCGCACCAGATGACGTGGCAGCGCTTTGGTGATCTTCCGCCCTGGG CGGGCGGGGGCAAGGGCATCTATCACCTGCTGAGCTGGCGCGTTGAGTCGACGGATGAGTTTCCCCCAGAACTGCTGGCC TGGGCCGAGGCGGAAAAGCCGCTCTGGCTGGCGCCGCCCGAAAGCCTGGAAGAAGTCCGTAAGCTGCAGAAGGGCGAAGG CGGGCCGGGCTGGGGGCAGTAA
Upstream 100 bases:
>100_bases CGTTTGCAATGCACCATGGGGTTTTCTGCGGGTTGGAGGTTTCGGTTGCGTGCCGGGAAATTCTGAGTAGCTTTAAAAGA TATATCTTTTGAGGTGATCC
Downstream 100 bases:
>100_bases CCGGCCTTTCGCCAACGGCCTATTTCAGAACCCCTGCCGAGACCAGCCGGTCAATGACGGCCTGCTGCTGTGCAATCGCA TCGGCGCGCTGGACCATCTT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MFRSVLSGFALLLVACSSVGEPAPEAEVSDADVFRNWVEARAGTGEAVHWVSEGAVYAYPSGEKILGMKGFDSSKVIWPE GDEGEVIHLTRKTFTYTDPVTGAFLTEFNGQKVVPIAYPYQLIRYRMKDGLIFADVEQGVEPRVQNIAAKDGIISRKVGD SWAFTAPLFLNFPLPGGGQYEAWENYDFFIHPEGSISEPHQMTWQRFGDLPPWAGGGKGIYHLLSWRVESTDEFPPELLA WAEAEKPLWLAPPESLEEVRKLQKGEGGPGWGQ
Sequences:
>Translated_273_residues MFRSVLSGFALLLVACSSVGEPAPEAEVSDADVFRNWVEARAGTGEAVHWVSEGAVYAYPSGEKILGMKGFDSSKVIWPE GDEGEVIHLTRKTFTYTDPVTGAFLTEFNGQKVVPIAYPYQLIRYRMKDGLIFADVEQGVEPRVQNIAAKDGIISRKVGD SWAFTAPLFLNFPLPGGGQYEAWENYDFFIHPEGSISEPHQMTWQRFGDLPPWAGGGKGIYHLLSWRVESTDEFPPELLA WAEAEKPLWLAPPESLEEVRKLQKGEGGPGWGQ >Mature_273_residues MFRSVLSGFALLLVACSSVGEPAPEAEVSDADVFRNWVEARAGTGEAVHWVSEGAVYAYPSGEKILGMKGFDSSKVIWPE GDEGEVIHLTRKTFTYTDPVTGAFLTEFNGQKVVPIAYPYQLIRYRMKDGLIFADVEQGVEPRVQNIAAKDGIISRKVGD SWAFTAPLFLNFPLPGGGQYEAWENYDFFIHPEGSISEPHQMTWQRFGDLPPWAGGGKGIYHLLSWRVESTDEFPPELLA WAEAEKPLWLAPPESLEEVRKLQKGEGGPGWGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30281; Mature: 30281
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRSVLSGFALLLVACSSVGEPAPEAEVSDADVFRNWVEARAGTGEAVHWVSEGAVYAYP CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCEEEEEC SGEKILGMKGFDSSKVIWPEGDEGEVIHLTRKTFTYTDPVTGAFLTEFNGQKVVPIAYPY CCCEEEEECCCCCCEEECCCCCCCCEEEEEECEEEECCCCCCCEEEECCCCEEEEEECHH QLIRYRMKDGLIFADVEQGVEPRVQNIAAKDGIISRKVGDSWAFTAPLFLNFPLPGGGQY HHHHHHHHCCEEEEEHHCCCCHHHHHHHHHCCEEEEECCCCEEEECCEEEECCCCCCCCC EAWENYDFFIHPEGSISEPHQMTWQRFGDLPPWAGGGKGIYHLLSWRVESTDEFPPELLA CCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHEEECCCCCCCHHHHH WAEAEKPLWLAPPESLEEVRKLQKGEGGPGWGQ HHCCCCCEEECCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MFRSVLSGFALLLVACSSVGEPAPEAEVSDADVFRNWVEARAGTGEAVHWVSEGAVYAYP CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCEEEEEC SGEKILGMKGFDSSKVIWPEGDEGEVIHLTRKTFTYTDPVTGAFLTEFNGQKVVPIAYPY CCCEEEEECCCCCCEEECCCCCCCCEEEEEECEEEECCCCCCCEEEECCCCEEEEEECHH QLIRYRMKDGLIFADVEQGVEPRVQNIAAKDGIISRKVGDSWAFTAPLFLNFPLPGGGQY HHHHHHHHCCEEEEEHHCCCCHHHHHHHHHCCEEEEECCCCEEEECCEEEECCCCCCCCC EAWENYDFFIHPEGSISEPHQMTWQRFGDLPPWAGGGKGIYHLLSWRVESTDEFPPELLA CCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHEEECCCCCCCHHHHH WAEAEKPLWLAPPESLEEVRKLQKGEGGPGWGQ HHCCCCCEEECCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA