Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is pat [H]

Identifier: 114798376

GI number: 114798376

Start: 1726709

End: 1727281

Strand: Reverse

Name: pat [H]

Synonym: HNE_1683

Alternate gene names: 114798376

Gene position: 1727281-1726709 (Counterclockwise)

Preceding gene: 114800228

Following gene: 114799434

Centisome position: 46.62

GC content: 64.22

Gene sequence:

>573_bases
ATGGGATACGCGCTGAAATCCGACACCTCAACGGGCTGGCCTGATGCGGCCTTCACCATTCGCGACGCTGACGACGCCGA
CATGGAGGCCGTCCAGGCCATCTATGCGCACTTTGTTCTGACCAGCCCGGCAACTTTCGAGGAAGTGCCGCCTTCGCTGC
CCGAGATGAAGATGCGGCGGGCTGGTGTATTGGCCAGCAGCTTGCCCTTCCTGGTCGCGGAAGCTGACGGTCTCGTGGTG
GGCTTTTGCTATGCCTCGCCCTATCGCAGCCGGGCCGCGTATCGCCACACGGTCGAGGATTCGATCTATGTGAGCGAAGC
ATTTGGCGGGCGCGGCGTGGGCAGCGCGCTGCTGGGCCAGCTGATCGCGCGGTGCGAAGCCGGGCCGTGGCGGCAGATGC
TGGCGGTAATGGGCACGGGCCGCAATGAGGCGTGCATCGCCCTGCACCGTAGCCTGGGGTTCAGCAATGTCGGCACACTG
AAAGCCGTCGGCCTGAAATTCGGCCAGTGGGAAGACACCGTGATGATGCAGCGCCATCTGGGCGAAGGCGAATGGTCTCT
CCCGAGGGAGTGA

Upstream 100 bases:

>100_bases
AGGCGGCGCAGGGTTCGCCCTCCCGTCGCAGGCGATTGTTGCTTTCGGGCCACAGTGGGGGCTCTCTTTGGGGAAACCAA
ACACCCCAGCTGGAGACCCC

Downstream 100 bases:

>100_bases
CTGCGCATTTCATGTGGGGAAGAGAGTGGCTCCGCGAGCAGGACTCGAACCTGCGACCGGGCGATTAACAGTCGCCTGCT
CTACCAACTGAGCTATCGCG

Product: acetyltransferase

Products: NA

Alternate protein names: PPT N-acetyltransferase; Phosphinothricin-resistance protein [H]

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MGYALKSDTSTGWPDAAFTIRDADDADMEAVQAIYAHFVLTSPATFEEVPPSLPEMKMRRAGVLASSLPFLVAEADGLVV
GFCYASPYRSRAAYRHTVEDSIYVSEAFGGRGVGSALLGQLIARCEAGPWRQMLAVMGTGRNEACIALHRSLGFSNVGTL
KAVGLKFGQWEDTVMMQRHLGEGEWSLPRE

Sequences:

>Translated_190_residues
MGYALKSDTSTGWPDAAFTIRDADDADMEAVQAIYAHFVLTSPATFEEVPPSLPEMKMRRAGVLASSLPFLVAEADGLVV
GFCYASPYRSRAAYRHTVEDSIYVSEAFGGRGVGSALLGQLIARCEAGPWRQMLAVMGTGRNEACIALHRSLGFSNVGTL
KAVGLKFGQWEDTVMMQRHLGEGEWSLPRE
>Mature_189_residues
GYALKSDTSTGWPDAAFTIRDADDADMEAVQAIYAHFVLTSPATFEEVPPSLPEMKMRRAGVLASSLPFLVAEADGLVVG
FCYASPYRSRAAYRHTVEDSIYVSEAFGGRGVGSALLGQLIARCEAGPWRQMLAVMGTGRNEACIALHRSLGFSNVGTLK
AVGLKFGQWEDTVMMQRHLGEGEWSLPRE

Specific function: This enzyme is an effector of phosphinothricin tripeptide (PTT or bialaphos) resistance. Inactivates PTT by transfer of an acetyl group [H]

COG id: COG1247

COG function: function code M; Sortase and related acyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1787719, Length=167, Percent_Identity=36.5269461077844, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: =2.3.1.183 [H]

Molecular weight: Translated: 20624; Mature: 20492

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYALKSDTSTGWPDAAFTIRDADDADMEAVQAIYAHFVLTSPATFEEVPPSLPEMKMRR
CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHH
AGVLASSLPFLVAEADGLVVGFCYASPYRSRAAYRHTVEDSIYVSEAFGGRGVGSALLGQ
HHHHHHCCCEEEEECCCEEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHH
LIARCEAGPWRQMLAVMGTGRNEACIALHRSLGFSNVGTLKAVGLKFGQWEDTVMMQRHL
HHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHC
GEGEWSLPRE
CCCCCCCCCC
>Mature Secondary Structure 
GYALKSDTSTGWPDAAFTIRDADDADMEAVQAIYAHFVLTSPATFEEVPPSLPEMKMRR
CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHH
AGVLASSLPFLVAEADGLVVGFCYASPYRSRAAYRHTVEDSIYVSEAFGGRGVGSALLGQ
HHHHHHCCCEEEEECCCEEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHH
LIARCEAGPWRQMLAVMGTGRNEACIALHRSLGFSNVGTLKAVGLKFGQWEDTVMMQRHL
HHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHC
GEGEWSLPRE
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA