| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is gspO [H]
Identifier: 114798317
GI number: 114798317
Start: 2813620
End: 2814276
Strand: Direct
Name: gspO [H]
Synonym: HNE_2653
Alternate gene names: 114798317
Gene position: 2813620-2814276 (Clockwise)
Preceding gene: 114797300
Following gene: 114798339
Centisome position: 75.94
GC content: 64.08
Gene sequence:
>657_bases ATGACGGGCAGTGATCTCGGCCTCGTGCTTCTGGGTTTCCTGATTGGCGCCGGCATTGAAGGGGCTGCCAGCCGGTTTGC CGGGGAGAGACGCACACTTCGAGACGTCTGGTTGAGCGCGCGCACGGTTTTCACAGCGATTGCCGGGGCGCTGGTGGCCC TCGCCGCCGGGCTCTACGGCTCCAACAACCTCCCGATCTTGAGTTTTACACTGCTGTTCGGGTGGGCGCTTCTTGCTTTG GCCGCCATTGACCTGCGCACTTATCTGCTGCCCGACAGGCTGAACCTTGCCGTGTTTCTGTTGGGCGCGGGAATGATTGC GTTATACCGGCAGGAGGTGTGGCCCTGGCATCTGGCCGGCGCGATCACCGGATATGGTCTGCTCTGGCTGGTGGGCGTGG CGTACCGCCGATTGCGCGGGGTCGACGGGCTCGGCCGCGGTGATGCCAAGCTGCTCGGCGCCATTGGAATGTGGGTCGGC CTGCAAGGCATTCCGCCCGTCCTGTTGATTGCATCGCTGAGCGGCATACTGGCGGTTCTTGCCGGCTCCGCCATCCGGCG CGAGTCTGTCTCCGGACAATCCATGATCGCCTTCGGCCCCTGGATCGCGCTGGCCGGATACATCGTCTGGCTGATGCCGG CGCTTCTGCCGTATTGA
Upstream 100 bases:
>100_bases ATGCAGCCAAAACGGCGAACTGAAGCGGGCGCTGCCTCGGGCACGGCAGGATTTGCCGCGCCTGCGCGCCGTAACGGCGC CCAATCCCGTGTGACACGCC
Downstream 100 bases:
>100_bases CCCGCGCAGCGCAGGCTGCGGTATAGCCCCACTCCGCTGAACCTCTTCGCTGAAACTGGCGCCAATCCTGCCCGCTCAAC AGGTGTCGGAAGGAAACGCA
Product: prepilin peptidase
Products: NA
Alternate protein names: Pectic enzymes secretion protein outO; Leader peptidase; Prepilin peptidase; N-methyltransferase [H]
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MTGSDLGLVLLGFLIGAGIEGAASRFAGERRTLRDVWLSARTVFTAIAGALVALAAGLYGSNNLPILSFTLLFGWALLAL AAIDLRTYLLPDRLNLAVFLLGAGMIALYRQEVWPWHLAGAITGYGLLWLVGVAYRRLRGVDGLGRGDAKLLGAIGMWVG LQGIPPVLLIASLSGILAVLAGSAIRRESVSGQSMIAFGPWIALAGYIVWLMPALLPY
Sequences:
>Translated_218_residues MTGSDLGLVLLGFLIGAGIEGAASRFAGERRTLRDVWLSARTVFTAIAGALVALAAGLYGSNNLPILSFTLLFGWALLAL AAIDLRTYLLPDRLNLAVFLLGAGMIALYRQEVWPWHLAGAITGYGLLWLVGVAYRRLRGVDGLGRGDAKLLGAIGMWVG LQGIPPVLLIASLSGILAVLAGSAIRRESVSGQSMIAFGPWIALAGYIVWLMPALLPY >Mature_217_residues TGSDLGLVLLGFLIGAGIEGAASRFAGERRTLRDVWLSARTVFTAIAGALVALAAGLYGSNNLPILSFTLLFGWALLALA AIDLRTYLLPDRLNLAVFLLGAGMIALYRQEVWPWHLAGAITGYGLLWLVGVAYRRLRGVDGLGRGDAKLLGAIGMWVGL QGIPPVLLIASLSGILAVLAGSAIRRESVSGQSMIAFGPWIALAGYIVWLMPALLPY
Specific function: Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue [H]
COG id: COG1989
COG function: function code NOU; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase A24 family [H]
Homologues:
Organism=Escherichia coli, GI1789732, Length=146, Percent_Identity=40.4109589041096, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010627 - InterPro: IPR014032 - InterPro: IPR000045 [H]
Pfam domain/function: PF06750 DiS_P_DiS; PF01478 Peptidase_A24 [H]
EC number: =3.4.23.43 [H]
Molecular weight: Translated: 23031; Mature: 22900
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSDLGLVLLGFLIGAGIEGAASRFAGERRTLRDVWLSARTVFTAIAGALVALAAGLYG CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SNNLPILSFTLLFGWALLALAAIDLRTYLLPDRLNLAVFLLGAGMIALYRQEVWPWHLAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH AITGYGLLWLVGVAYRRLRGVDGLGRGDAKLLGAIGMWVGLQGIPPVLLIASLSGILAVL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AGSAIRRESVSGQSMIAFGPWIALAGYIVWLMPALLPY HHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TGSDLGLVLLGFLIGAGIEGAASRFAGERRTLRDVWLSARTVFTAIAGALVALAAGLYG CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SNNLPILSFTLLFGWALLALAAIDLRTYLLPDRLNLAVFLLGAGMIALYRQEVWPWHLAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH AITGYGLLWLVGVAYRRLRGVDGLGRGDAKLLGAIGMWVGLQGIPPVLLIASLSGILAVL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AGSAIRRESVSGQSMIAFGPWIALAGYIVWLMPALLPY HHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1429461 [H]