| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798275
Identifier: 114798275
GI number: 114798275
Start: 1274797
End: 1276161
Strand: Reverse
Name: 114798275
Synonym: HNE_1251
Alternate gene names: NA
Gene position: 1276161-1274797 (Counterclockwise)
Preceding gene: 114797293
Following gene: 114800419
Centisome position: 34.44
GC content: 64.1
Gene sequence:
>1365_bases ATGGCTGACGGACTGCTGGACAGCGCGCTGGGCGCCGGGGTATCCCCGGAAGACGTAAAGGCAATCGCCGATGCGATCGA CATGGATGAGCTGACGAAACTCATCCTGGACCTCGCCAACATCTACAGCCCGTCAACCGGCGAGGCGGAGGCCTCCGCTT TCGTCCATGACTGGATGGACCGCGAAGGTTTCCGCCCGCTCAGCGTCGGCGCCGTGCCCCATCGCCAGAATGTCATCGGC ACCTATGGCGGCAACGGCCCGGGAAAAAACCTCCTCTTCACGGCCCATCTCGACACCGAGAGTGAGCCCGCCGATCCAGT CATCCGCGCCAAGACCCGCCGCCCCGAAAGCGTGGCAAACCGCGAATGGAAAGAGTGCTGGCTGGAGGATGGCAAATTCT ATGGCTACGCCGTCGCCAATGATCGCGGCCCGATGAGCTGTATGCTGATGGCCGCCAAGGCGCTGAAGAAAGCCGGTTAT GAACTCGCCGGCCGCATGTATCTCACAGCCTGCCCCGGCGAATGCGGCCCCGAGCCCATCGAAGAGCATGGCGGCATCGA CAATATGGGCAAGGAAATCGGCGCCCATTACATGTTCCACCATGGCGGCGTCGCGCCCGATTTCGCCATCGCCGCCGAGG GCACGGATTTCGGCGTCACCTGGCTTGGCTGCGGCGGCGCGATGTTCCGCATCCGCCTCTATGGCCAGTCGATTTTCCGC CCGCTCCTCAAGGCGCCCAAAGCCACCGCCGACCATCCCAGCTCGATCTACAAGCTCGGCCCGGTCATCGAGGCGCTCCA CGCCTGGTCGCTCGATTACGAGACCAGCAACGCCTACCACGCCAAGGGCGGCTCCTCCCTGCCCAAGGCCACGATCAGCT GCGTCCAGGCCGGCTTCCCCCACAGCGGCGGCACCGAAGTCGCCGCCATCTATATCAGCTGCGACCTTAGCCCGAAGCAG AAGGCCGCCCAGGTCCTGCACGAACTCGAAGCCGTCATGCGTGCCCTGCCCGGCATCGAGTTTGACATCGAGCCGGTGAA CGTCAGCCATGGCTACGAAGCCGACGACACCGAAGTCACCCCCCTCGTCGCCGGTGTCGATGTGGCGGTTCAGGCCGTGC TGGATCACCCCGTCGAAATCGCCAAGCCGGTCTATTCCAGCATGTGGCGCGACCATAACGTGTTCAACATGCACCGCGTG CCCGCCATCACCTTCGGCCCCGTCCGCTGGCGCCCGACGCCGGAAGACTTCTTCAAATGCACGCTGATGTACGCCCTCAC AGCGCTGACGATCTGCGGCCGCATGGACGGCGAAGTCGAGAAACGCACCGGGCGCACGGTTTATGGCGACAACCCGTTCG ATTGA
Upstream 100 bases:
>100_bases AAATGTTCGGAGACATTCTCCCCAAGCTGCGCCAGCGCTTTCCCGCCCAGAACCACGAACCCGCATAATCAGATAACAGA ATAAGGGAGAGGGAAACCTC
Downstream 100 bases:
>100_bases GCCGTTTGTCGAACAGCCCGGTCAGGCCGCTTTCTTGTCAGAGTCCAGATAGGTCATCAACATATCCTGAAAGACCACCT TCATCTGCTCGATATACTCG
Product: M20/M25/M40 family peptidase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MADGLLDSALGAGVSPEDVKAIADAIDMDELTKLILDLANIYSPSTGEAEASAFVHDWMDREGFRPLSVGAVPHRQNVIG TYGGNGPGKNLLFTAHLDTESEPADPVIRAKTRRPESVANREWKECWLEDGKFYGYAVANDRGPMSCMLMAAKALKKAGY ELAGRMYLTACPGECGPEPIEEHGGIDNMGKEIGAHYMFHHGGVAPDFAIAAEGTDFGVTWLGCGGAMFRIRLYGQSIFR PLLKAPKATADHPSSIYKLGPVIEALHAWSLDYETSNAYHAKGGSSLPKATISCVQAGFPHSGGTEVAAIYISCDLSPKQ KAAQVLHELEAVMRALPGIEFDIEPVNVSHGYEADDTEVTPLVAGVDVAVQAVLDHPVEIAKPVYSSMWRDHNVFNMHRV PAITFGPVRWRPTPEDFFKCTLMYALTALTICGRMDGEVEKRTGRTVYGDNPFD
Sequences:
>Translated_454_residues MADGLLDSALGAGVSPEDVKAIADAIDMDELTKLILDLANIYSPSTGEAEASAFVHDWMDREGFRPLSVGAVPHRQNVIG TYGGNGPGKNLLFTAHLDTESEPADPVIRAKTRRPESVANREWKECWLEDGKFYGYAVANDRGPMSCMLMAAKALKKAGY ELAGRMYLTACPGECGPEPIEEHGGIDNMGKEIGAHYMFHHGGVAPDFAIAAEGTDFGVTWLGCGGAMFRIRLYGQSIFR PLLKAPKATADHPSSIYKLGPVIEALHAWSLDYETSNAYHAKGGSSLPKATISCVQAGFPHSGGTEVAAIYISCDLSPKQ KAAQVLHELEAVMRALPGIEFDIEPVNVSHGYEADDTEVTPLVAGVDVAVQAVLDHPVEIAKPVYSSMWRDHNVFNMHRV PAITFGPVRWRPTPEDFFKCTLMYALTALTICGRMDGEVEKRTGRTVYGDNPFD >Mature_453_residues ADGLLDSALGAGVSPEDVKAIADAIDMDELTKLILDLANIYSPSTGEAEASAFVHDWMDREGFRPLSVGAVPHRQNVIGT YGGNGPGKNLLFTAHLDTESEPADPVIRAKTRRPESVANREWKECWLEDGKFYGYAVANDRGPMSCMLMAAKALKKAGYE LAGRMYLTACPGECGPEPIEEHGGIDNMGKEIGAHYMFHHGGVAPDFAIAAEGTDFGVTWLGCGGAMFRIRLYGQSIFRP LLKAPKATADHPSSIYKLGPVIEALHAWSLDYETSNAYHAKGGSSLPKATISCVQAGFPHSGGTEVAAIYISCDLSPKQK AAQVLHELEAVMRALPGIEFDIEPVNVSHGYEADDTEVTPLVAGVDVAVQAVLDHPVEIAKPVYSSMWRDHNVFNMHRVP AITFGPVRWRPTPEDFFKCTLMYALTALTICGRMDGEVEKRTGRTVYGDNPFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49187; Mature: 49056
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADGLLDSALGAGVSPEDVKAIADAIDMDELTKLILDLANIYSPSTGEAEASAFVHDWMD CCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH REGFRPLSVGAVPHRQNVIGTYGGNGPGKNLLFTAHLDTESEPADPVIRAKTRRPESVAN CCCCCCEEECCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCHHCCCCCCCHHHHH REWKECWLEDGKFYGYAVANDRGPMSCMLMAAKALKKAGYELAGRMYLTACPGECGPEPI HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHCCEEEEECCCCCCCCCH EEHGGIDNMGKEIGAHYMFHHGGVAPDFAIAAEGTDFGVTWLGCGGAMFRIRLYGQSIFR HHCCCCCHHHHHHHHHHEEECCCCCCCCEEEECCCCCCEEEEECCCEEEEEEEHHHHHHH PLLKAPKATADHPSSIYKLGPVIEALHAWSLDYETSNAYHAKGGSSLPKATISCVQAGFP HHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHCCCC HSGGTEVAAIYISCDLSPKQKAAQVLHELEAVMRALPGIEFDIEPVNVSHGYEADDTEVT CCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC PLVAGVDVAVQAVLDHPVEIAKPVYSSMWRDHNVFNMHRVPAITFGPVRWRPTPEDFFKC HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCEECCCCHHHHHHH TLMYALTALTICGRMDGEVEKRTGRTVYGDNPFD HHHHHHHHHHHHHCCCCCHHHHCCCEECCCCCCC >Mature Secondary Structure ADGLLDSALGAGVSPEDVKAIADAIDMDELTKLILDLANIYSPSTGEAEASAFVHDWMD CCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH REGFRPLSVGAVPHRQNVIGTYGGNGPGKNLLFTAHLDTESEPADPVIRAKTRRPESVAN CCCCCCEEECCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCHHCCCCCCCHHHHH REWKECWLEDGKFYGYAVANDRGPMSCMLMAAKALKKAGYELAGRMYLTACPGECGPEPI HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHCCEEEEECCCCCCCCCH EEHGGIDNMGKEIGAHYMFHHGGVAPDFAIAAEGTDFGVTWLGCGGAMFRIRLYGQSIFR HHCCCCCHHHHHHHHHHEEECCCCCCCCEEEECCCCCCEEEEECCCEEEEEEEHHHHHHH PLLKAPKATADHPSSIYKLGPVIEALHAWSLDYETSNAYHAKGGSSLPKATISCVQAGFP HHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHCCCC HSGGTEVAAIYISCDLSPKQKAAQVLHELEAVMRALPGIEFDIEPVNVSHGYEADDTEVT CCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC PLVAGVDVAVQAVLDHPVEIAKPVYSSMWRDHNVFNMHRVPAITFGPVRWRPTPEDFFKC HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCEECCCCHHHHHHH TLMYALTALTICGRMDGEVEKRTGRTVYGDNPFD HHHHHHHHHHHHHCCCCCHHHHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA