| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798267
Identifier: 114798267
GI number: 114798267
Start: 1248551
End: 1249069
Strand: Reverse
Name: 114798267
Synonym: HNE_1227
Alternate gene names: NA
Gene position: 1249069-1248551 (Counterclockwise)
Preceding gene: 114797401
Following gene: 114797319
Centisome position: 33.71
GC content: 61.27
Gene sequence:
>519_bases ATGGCTGCTTCCCTGTCTCTCGAAAACTCCGGCAAAGGCAAGATGAAGGGCTGGCATGCTCTGCTCTGGTTCCTCGGTTT CTTCGGCTTCATGTTCGTCGTGAACGGCATTTTCCTCTGGGCGGCTATCACCAGCTTCCCTGGTGAGGATGTTGAAAAGT CCTATCTCACTGGCCTGGACTACAATCAGGAACTGGCCCGCCGCGCGCATCAGGAGGCCGCTGGCTGGAACGCCGAAATC GGTATCAGCGGCACCAATCAGGGCTTCCTCCTCACCAGCCGCCTGATGACGCGCGATGGCAGCGCCCTGCCCGTCTTCGG CACCCAGGCACAGCTGCGCCACCCAACTGACCGGGCTCTTGACCGGGTTGTCACGCTCACCCCCGCCGGTGGCGGCGAGT ATGTCGCAGAACTTGGCGACCTGCATGCAGGCGCCTGGAGCGTCAATATTGCGGCCGATGTCGATCCGGAAACGGATGGC TTCGAGTTCCGCGCCAGCCGGGAAATCATTGTGCCATGA
Upstream 100 bases:
>100_bases AAAACCTCTCCCGCCGCACGACCCTCACGGTACAGATCAAGGACGTGGCTACCGGTGAAATCGCCGAAGCGGACGCCCCC TTTACAACAGGAGACCAATA
Downstream 100 bases:
>100_bases CCGGCCTCGCCCTCGACACCAATGGCTGCCCCAGCGGGCTCGCGCCGCCGAGCGGGTCAGATACCTCTGACCCGGCCGCC TTCGTGCGCAAGGTAGGCAA
Product: FixH family protein
Products: NA
Alternate protein names: FixH Superfamily
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MAASLSLENSGKGKMKGWHALLWFLGFFGFMFVVNGIFLWAAITSFPGEDVEKSYLTGLDYNQELARRAHQEAAGWNAEI GISGTNQGFLLTSRLMTRDGSALPVFGTQAQLRHPTDRALDRVVTLTPAGGGEYVAELGDLHAGAWSVNIAADVDPETDG FEFRASREIIVP
Sequences:
>Translated_172_residues MAASLSLENSGKGKMKGWHALLWFLGFFGFMFVVNGIFLWAAITSFPGEDVEKSYLTGLDYNQELARRAHQEAAGWNAEI GISGTNQGFLLTSRLMTRDGSALPVFGTQAQLRHPTDRALDRVVTLTPAGGGEYVAELGDLHAGAWSVNIAADVDPETDG FEFRASREIIVP >Mature_171_residues AASLSLENSGKGKMKGWHALLWFLGFFGFMFVVNGIFLWAAITSFPGEDVEKSYLTGLDYNQELARRAHQEAAGWNAEIG ISGTNQGFLLTSRLMTRDGSALPVFGTQAQLRHPTDRALDRVVTLTPAGGGEYVAELGDLHAGAWSVNIAADVDPETDGF EFRASREIIVP
Specific function: Unknown
COG id: COG5456
COG function: function code P; Predicted integral membrane protein linked to a cation pump
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18678; Mature: 18547
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASLSLENSGKGKMKGWHALLWFLGFFGFMFVVNGIFLWAAITSFPGEDVEKSYLTGLD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC YNQELARRAHQEAAGWNAEIGISGTNQGFLLTSRLMTRDGSALPVFGTQAQLRHPTDRAL CCHHHHHHHHHHHCCCCCEEECCCCCCCEEEEHHHHHCCCCCCEEECCHHHHCCCHHHHH DRVVTLTPAGGGEYVAELGDLHAGAWSVNIAADVDPETDGFEFRASREIIVP HHEEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEECCCEEECC >Mature Secondary Structure AASLSLENSGKGKMKGWHALLWFLGFFGFMFVVNGIFLWAAITSFPGEDVEKSYLTGLD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC YNQELARRAHQEAAGWNAEIGISGTNQGFLLTSRLMTRDGSALPVFGTQAQLRHPTDRAL CCHHHHHHHHHHHCCCCCEEECCCCCCCEEEEHHHHHCCCCCCEEECCHHHHCCCHHHHH DRVVTLTPAGGGEYVAELGDLHAGAWSVNIAADVDPETDGFEFRASREIIVP HHEEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA