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The map label for this gene is 114798154

Identifier: 114798154

GI number: 114798154

Start: 1129275

End: 1130195

Strand: Direct

Name: 114798154

Synonym: HNE_1120

Alternate gene names: NA

Gene position: 1129275-1130195 (Clockwise)

Preceding gene: 114799050

Following gene: 114797136

Centisome position: 30.48

GC content: 61.35

Gene sequence:

>921_bases
ATGCAATCCTTAGCCAAGATTTCCGACGTTCTGTCAAAAGACGAGCTGAACATGCTCCGGCAGAAGTCTGACCTGAAGGC
GCTGGCGACCCTGGTGTGGAACTGGGGCCTGATCGTTGCGGCCTTCGCCATCGCCGTCGTGTGGCCAAACCCCCTCACCA
TTCTCCTCGGCATCCTGATCCTTGGCGGGCGCCAACTTGGCCTCGGCATCATCAATCATGACTGCGCCCACCACGCCTTC
TTCAAGAACAAGGCGGTCGATGAATTTGTTGGCCACTGGATCGTCGGCGCGCCGATGAACATCTCGCTGGCCGCCTATCG
CGCCTATCACCTGAAACACCACCAGCATGCCGGCACGCCGGACGATCCGGACATCGGCTTCGTCAAGAATTACCCGGTTC
CGGCCGAAAGCCTGCGACGCAAATTCGTGCGCGATCTTACCGGCCAGACCGGCTACCGCGACACGCTGCGCAAGCTTCGC
AGCTTCAAACTCTCCCGCCACTGGCCCTGGCTCACCTTCCACATCCTGCTGCTGGGCACACTGACACTTGCCGGGGCGCC
ATGGGCATATCTTATGTGGTGGGCGGCGGAAATTTTCGTTTATCCCGCGATCGTCCGCCTCCGGCAGATCGGTGAACACG
GCACCGCGCTGGATCGCACCAGCCGGGACGCGCGCCTGAATACCGGCACGACGACCGCGCCTTTCTGGCAGCGCGTGCTG
GTGGCGCCCAATAATGTGAACTTCCATCTGGAGCATCACCTGTTCGCGCATATCCCACCTTATAACCTCCGCAAGATGCA
CACGCTCCTGGCCTCCCGCGGCTACTATGACGGGGTCGACTGTATCTCGCGGGACTATTTCGACGTGATCCGCCGCGCCG
TTCGCAAGGATGCCGCTGCGCCGATGGTGGCCGCAGAATAG

Upstream 100 bases:

>100_bases
AGGTCCTGTGGCGTCAATGGATTAAAATAATACGTGAATTGACTCATTGTGCCATTTTAGGTAATAAGTGTTTCAGAACA
CATAATGGGAGAGGCCGCGC

Downstream 100 bases:

>100_bases
CAGGGATTTTCCAGCCGGGCTGTTTGTACGCGGAAAATGCCGTGCACAAACATTCCCGCGAACTCGCCTTGCGACGCGGC
GATTGCGAGTGCGGCAGACG

Product: fatty acid desaturase family proteiin

Products: NA

Alternate protein names: Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Family Proteiin; Fatty Acid Desaturase Domain-Containing Protein; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Subfamily Protein; Fatty Acid Desaturase Protein

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MQSLAKISDVLSKDELNMLRQKSDLKALATLVWNWGLIVAAFAIAVVWPNPLTILLGILILGGRQLGLGIINHDCAHHAF
FKNKAVDEFVGHWIVGAPMNISLAAYRAYHLKHHQHAGTPDDPDIGFVKNYPVPAESLRRKFVRDLTGQTGYRDTLRKLR
SFKLSRHWPWLTFHILLLGTLTLAGAPWAYLMWWAAEIFVYPAIVRLRQIGEHGTALDRTSRDARLNTGTTTAPFWQRVL
VAPNNVNFHLEHHLFAHIPPYNLRKMHTLLASRGYYDGVDCISRDYFDVIRRAVRKDAAAPMVAAE

Sequences:

>Translated_306_residues
MQSLAKISDVLSKDELNMLRQKSDLKALATLVWNWGLIVAAFAIAVVWPNPLTILLGILILGGRQLGLGIINHDCAHHAF
FKNKAVDEFVGHWIVGAPMNISLAAYRAYHLKHHQHAGTPDDPDIGFVKNYPVPAESLRRKFVRDLTGQTGYRDTLRKLR
SFKLSRHWPWLTFHILLLGTLTLAGAPWAYLMWWAAEIFVYPAIVRLRQIGEHGTALDRTSRDARLNTGTTTAPFWQRVL
VAPNNVNFHLEHHLFAHIPPYNLRKMHTLLASRGYYDGVDCISRDYFDVIRRAVRKDAAAPMVAAE
>Mature_306_residues
MQSLAKISDVLSKDELNMLRQKSDLKALATLVWNWGLIVAAFAIAVVWPNPLTILLGILILGGRQLGLGIINHDCAHHAF
FKNKAVDEFVGHWIVGAPMNISLAAYRAYHLKHHQHAGTPDDPDIGFVKNYPVPAESLRRKFVRDLTGQTGYRDTLRKLR
SFKLSRHWPWLTFHILLLGTLTLAGAPWAYLMWWAAEIFVYPAIVRLRQIGEHGTALDRTSRDARLNTGTTTAPFWQRVL
VAPNNVNFHLEHHLFAHIPPYNLRKMHTLLASRGYYDGVDCISRDYFDVIRRAVRKDAAAPMVAAE

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34695; Mature: 34695

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLAKISDVLSKDELNMLRQKSDLKALATLVWNWGLIVAAFAIAVVWPNPLTILLGILI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LGGRQLGLGIINHDCAHHAFFKNKAVDEFVGHWIVGAPMNISLAAYRAYHLKHHQHAGTP
HCCCHHCCCHHHHHHHHHHHHHHCHHHHHHCCEEECCCCCCHHHHHHHHHHHHHCCCCCC
DDPDIGFVKNYPVPAESLRRKFVRDLTGQTGYRDTLRKLRSFKLSRHWPWLTFHILLLGT
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LTLAGAPWAYLMWWAAEIFVYPAIVRLRQIGEHGTALDRTSRDARLNTGTTTAPFWQRVL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHH
VAPNNVNFHLEHHLFAHIPPYNLRKMHTLLASRGYYDGVDCISRDYFDVIRRAVRKDAAA
CCCCCCEEEEECCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PMVAAE
CCCCCC
>Mature Secondary Structure
MQSLAKISDVLSKDELNMLRQKSDLKALATLVWNWGLIVAAFAIAVVWPNPLTILLGILI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LGGRQLGLGIINHDCAHHAFFKNKAVDEFVGHWIVGAPMNISLAAYRAYHLKHHQHAGTP
HCCCHHCCCHHHHHHHHHHHHHHCHHHHHHCCEEECCCCCCHHHHHHHHHHHHHCCCCCC
DDPDIGFVKNYPVPAESLRRKFVRDLTGQTGYRDTLRKLRSFKLSRHWPWLTFHILLLGT
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LTLAGAPWAYLMWWAAEIFVYPAIVRLRQIGEHGTALDRTSRDARLNTGTTTAPFWQRVL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHH
VAPNNVNFHLEHHLFAHIPPYNLRKMHTLLASRGYYDGVDCISRDYFDVIRRAVRKDAAA
CCCCCCEEEEECCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PMVAAE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA