| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is map2 [H]
Identifier: 114798034
GI number: 114798034
Start: 1365251
End: 1366042
Strand: Reverse
Name: map2 [H]
Synonym: HNE_1332
Alternate gene names: 114798034
Gene position: 1366042-1365251 (Counterclockwise)
Preceding gene: 114797710
Following gene: 114798788
Centisome position: 36.87
GC content: 62.37
Gene sequence:
>792_bases ATGACAAAAACGCCGGACGAACTCGCCGCGATGGCCCATTCCGGTCGCCTGCTCGCTTCGGTGTTCGGGCTGATCGACCA GATGCAGCTCATCGGCATGAGCACGCTGGAAGTGAACGACCGGGTTGAGCGCTTCATCGTCGATGAGCTGAAATCCCGCC CCGCCAGCAAGGGGCAATACGGCTTTGAGTACGTTCTCAATTCCTCCGTGAACGATGTGGTTTGCCACGCCATTCCCTCG GCCCGCGAAATCCTGAAAGACGGCGACATCGTCAATTTCGACATCACGTTGGAAAAGAACGGCTACATCGCCGATTCCAG CAAGACGTACATGCTCGGCAACGTCGCCACGCCCGCCCGCCGCCTCGTGCGCACCACCTATGAAGCCATGTGGAAAGGCA TCCGCGCCGTCCGCCCCGGCGCCACGCTGGGCGACATCGGCCACGCCATCGAGCGCCATGCCAAGCAAGCGGGCTATTCC ATCGTCCGCGAATTCTGCGGCCACGGCATCGGCCGGGAAATGCACGAAGAACCCTCCGTACTCCACTTCGGCCGCCGCGG CACCGGCCTCCCCCTCCGCCCCGGCATGACCTTCACCATAGAGCCCATGCTTAACGAAGGCCGCCGCGGCGTGTACACGG AAGAGGACGACTGGACCGTCCGCACCGAAGACGGAAAACTCTCAGCCCAGTTCGAGCATACAATCGCCGTGACAGAGCGC GGCGTGGACGTGCTGACGCTAAGGCCGGAAGAAGCGCATCTGGTAAAAGAAGCAACCCGCAGGGCGGGTTAG
Upstream 100 bases:
>100_bases TGCTCTGCGAGATGCACCCGACCCTCTCCTTCAACGAAATCGTCCAGCGCGAGATGGCCGCCGCCGGCGTCACGCCGGAG CCGCTGGGCGCCGCCGCCGC
Downstream 100 bases:
>100_bases CCGAAGGCGTACATTCGCCCTCGTCACTCTCGACCGGCGCAGCCGGTCTGAGAGCACCGTCCCATCCCCGTTGTTTGGTG CATTGCGCTTCGCTTAATGC
Product: methionine aminopeptidase, type I
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTKTPDELAAMAHSGRLLASVFGLIDQMQLIGMSTLEVNDRVERFIVDELKSRPASKGQYGFEYVLNSSVNDVVCHAIPS AREILKDGDIVNFDITLEKNGYIADSSKTYMLGNVATPARRLVRTTYEAMWKGIRAVRPGATLGDIGHAIERHAKQAGYS IVREFCGHGIGREMHEEPSVLHFGRRGTGLPLRPGMTFTIEPMLNEGRRGVYTEEDDWTVRTEDGKLSAQFEHTIAVTER GVDVLTLRPEEAHLVKEATRRAG
Sequences:
>Translated_263_residues MTKTPDELAAMAHSGRLLASVFGLIDQMQLIGMSTLEVNDRVERFIVDELKSRPASKGQYGFEYVLNSSVNDVVCHAIPS AREILKDGDIVNFDITLEKNGYIADSSKTYMLGNVATPARRLVRTTYEAMWKGIRAVRPGATLGDIGHAIERHAKQAGYS IVREFCGHGIGREMHEEPSVLHFGRRGTGLPLRPGMTFTIEPMLNEGRRGVYTEEDDWTVRTEDGKLSAQFEHTIAVTER GVDVLTLRPEEAHLVKEATRRAG >Mature_262_residues TKTPDELAAMAHSGRLLASVFGLIDQMQLIGMSTLEVNDRVERFIVDELKSRPASKGQYGFEYVLNSSVNDVVCHAIPSA REILKDGDIVNFDITLEKNGYIADSSKTYMLGNVATPARRLVRTTYEAMWKGIRAVRPGATLGDIGHAIERHAKQAGYSI VREFCGHGIGREMHEEPSVLHFGRRGTGLPLRPGMTFTIEPMLNEGRRGVYTEEDDWTVRTEDGKLSAQFEHTIAVTERG VDVLTLRPEEAHLVKEATRRAG
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=247, Percent_Identity=40.080971659919, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI40385867, Length=250, Percent_Identity=37.6, Blast_Score=174, Evalue=6e-44, Organism=Escherichia coli, GI1786364, Length=249, Percent_Identity=45.7831325301205, Blast_Score=241, Evalue=3e-65, Organism=Escherichia coli, GI1788728, Length=233, Percent_Identity=27.8969957081545, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71996291, Length=218, Percent_Identity=39.4495412844037, Blast_Score=170, Evalue=7e-43, Organism=Saccharomyces cerevisiae, GI6323273, Length=213, Percent_Identity=43.1924882629108, Blast_Score=188, Evalue=6e-49, Organism=Drosophila melanogaster, GI21355531, Length=245, Percent_Identity=38.7755102040816, Blast_Score=179, Evalue=1e-45, Organism=Drosophila melanogaster, GI24583427, Length=244, Percent_Identity=36.8852459016393, Blast_Score=162, Evalue=3e-40,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 29226; Mature: 29094
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTPDELAAMAHSGRLLASVFGLIDQMQLIGMSTLEVNDRVERFIVDELKSRPASKGQY CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC GFEYVLNSSVNDVVCHAIPSAREILKDGDIVNFDITLEKNGYIADSSKTYMLGNVATPAR CHHHEECCCCHHHHHHCCHHHHHHHCCCCEEEEEEEECCCCEEECCCCEEEEECCCHHHH RLVRTTYEAMWKGIRAVRPGATLGDIGHAIERHAKQAGYSIVREFCGHGIGREMHEEPSV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCE LHFGRRGTGLPLRPGMTFTIEPMLNEGRRGVYTEEDDWTVRTEDGKLSAQFEHTIAVTER EEECCCCCCCCCCCCCEEEECHHHCCCCCCCCCCCCCCEEEECCCCEEEEEHHEEEEECC GVDVLTLRPEEAHLVKEATRRAG CCEEEEECCCHHHHHHHHHHHCC >Mature Secondary Structure TKTPDELAAMAHSGRLLASVFGLIDQMQLIGMSTLEVNDRVERFIVDELKSRPASKGQY CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC GFEYVLNSSVNDVVCHAIPSAREILKDGDIVNFDITLEKNGYIADSSKTYMLGNVATPAR CHHHEECCCCHHHHHHCCHHHHHHHCCCCEEEEEEEECCCCEEECCCCEEEEECCCHHHH RLVRTTYEAMWKGIRAVRPGATLGDIGHAIERHAKQAGYSIVREFCGHGIGREMHEEPSV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCE LHFGRRGTGLPLRPGMTFTIEPMLNEGRRGVYTEEDDWTVRTEDGKLSAQFEHTIAVTER EEECCCCCCCCCCCCCEEEECHHHCCCCCCCCCCCCCCEEEECCCCEEEEEHHEEEEECC GVDVLTLRPEEAHLVKEATRRAG CCEEEEECCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]