Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114798002

Identifier: 114798002

GI number: 114798002

Start: 2138600

End: 2139220

Strand: Direct

Name: 114798002

Synonym: HNE_2065

Alternate gene names: NA

Gene position: 2138600-2139220 (Clockwise)

Preceding gene: 114797751

Following gene: 114799143

Centisome position: 57.72

GC content: 63.45

Gene sequence:

>621_bases
ATGCTGGGTAAATTCCTGAAAGGTCTCGAAACGGGCAAACTTGGCCGCAAGCCGGCACAGGCCGTAGCCGCGCCAGATAT
TTCGCGCGTCATCAAACCTTCCCTGGCTACAACTTATCATGAGCCCATGCCTGCCGCTTGGTATGAGGCCGACGATGAGG
AAGCGCACGCGCCTGAACCAGCCGCCTTCGCGCTGGCCGAGTTCATTACCGATCCCCAGGTGATGGAGACCCAGGCTGAG
GAAGCGCTCGACGCACTGACCGAAGAATTTGAAGGCTGGATGCGCAACGATCTGGAAAAGATGCGCGACGCCTGGCGGAT
TGCGCAGAAGCCGGAAGCCGACGCCGACGATTACCGCACGCTTTACACCTGCGCGCACAATATTCGCGGCGCGGCGTCGT
CCTACGGATACCCGGCCGCCTCACGCCTCTGCGGATCGCTGTGCGACCTGCTGAGCGGGACGCGCCCCGGCGAGAACAGC
GCGCTGATCAACCTGCATATTGAAGCCTGCCGCGCCGCCGTTGGCGCGGGCCCTCAGGGCGAGGGCTCAGAGTCGGTTGC
CGACGCCGTGTGCGAGGCGCTGGAAAAGCGCGTGGCGCTCAAAGTTTCCTCGGCGGGCTAA

Upstream 100 bases:

>100_bases
CGGGAGCAGTTTGCTTTCTGAAGCAGTTTCAACGGCTCGCGTCAGCGTAATGTTAAATCTTGTTGGTTAATCCTGCCCCT
CAAGAAACGAGGGTGGAGTG

Downstream 100 bases:

>100_bases
ACCTTCACATTCGACAGCAGCTCGACCGTCTGGCCATAGCCAGCCTCTTCGGGAATGAAGAGGCAGGGCGCGCCGGTTTC
GGTTTTACCCGGTTCTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLGKFLKGLETGKLGRKPAQAVAAPDISRVIKPSLATTYHEPMPAAWYEADDEEAHAPEPAAFALAEFITDPQVMETQAE
EALDALTEEFEGWMRNDLEKMRDAWRIAQKPEADADDYRTLYTCAHNIRGAASSYGYPAASRLCGSLCDLLSGTRPGENS
ALINLHIEACRAAVGAGPQGEGSESVADAVCEALEKRVALKVSSAG

Sequences:

>Translated_206_residues
MLGKFLKGLETGKLGRKPAQAVAAPDISRVIKPSLATTYHEPMPAAWYEADDEEAHAPEPAAFALAEFITDPQVMETQAE
EALDALTEEFEGWMRNDLEKMRDAWRIAQKPEADADDYRTLYTCAHNIRGAASSYGYPAASRLCGSLCDLLSGTRPGENS
ALINLHIEACRAAVGAGPQGEGSESVADAVCEALEKRVALKVSSAG
>Mature_206_residues
MLGKFLKGLETGKLGRKPAQAVAAPDISRVIKPSLATTYHEPMPAAWYEADDEEAHAPEPAAFALAEFITDPQVMETQAE
EALDALTEEFEGWMRNDLEKMRDAWRIAQKPEADADDYRTLYTCAHNIRGAASSYGYPAASRLCGSLCDLLSGTRPGENS
ALINLHIEACRAAVGAGPQGEGSESVADAVCEALEKRVALKVSSAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22083; Mature: 22083

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS50894 HPT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGKFLKGLETGKLGRKPAQAVAAPDISRVIKPSLATTYHEPMPAAWYEADDEEAHAPEP
CCHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCH
AAFALAEFITDPQVMETQAEEALDALTEEFEGWMRNDLEKMRDAWRIAQKPEADADDYRT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LYTCAHNIRGAASSYGYPAASRLCGSLCDLLSGTRPGENSALINLHIEACRAAVGAGPQG
HHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCCC
EGSESVADAVCEALEKRVALKVSSAG
CCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLGKFLKGLETGKLGRKPAQAVAAPDISRVIKPSLATTYHEPMPAAWYEADDEEAHAPEP
CCHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCH
AAFALAEFITDPQVMETQAEEALDALTEEFEGWMRNDLEKMRDAWRIAQKPEADADDYRT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LYTCAHNIRGAASSYGYPAASRLCGSLCDLLSGTRPGENSALINLHIEACRAAVGAGPQG
HHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCCC
EGSESVADAVCEALEKRVALKVSSAG
CCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA