| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is fda [H]
Identifier: 114797979
GI number: 114797979
Start: 3357986
End: 3358879
Strand: Direct
Name: fda [H]
Synonym: HNE_3181
Alternate gene names: 114797979
Gene position: 3357986-3358879 (Clockwise)
Preceding gene: 114799328
Following gene: 114798750
Centisome position: 90.63
GC content: 61.19
Gene sequence:
>894_bases ATGCTGAATGCACAAATGGCGAAACAGGTGGCCGAAAAGCCAGGCTTTATCGCGGCCCTTGACCAATCTGGCGGCTCGAC GCCCAAAGCCCTCCGCCTCTACGGCGTTGAGGAAAGCGCTTATAACAATGATGAGGAAATGTACGCCCTCATCCACCAGA TGCGTGCCCGGATCATCAAATCGCCCGCCTTCACCGGCGAGCAGGTGGTCGGCGCCATCCTCTTCGAACGCACGATGGAC GGCGAGATCGACGGCATTCCGACCGCAGAATATCTCTGGACCAAGCGCAGCGTCGTTCCCTTCCTCAAGGTCGACAAGGG CCTTGCCGACGAGAAAGACGGCGTGCAGCTGATGAAGCCGATGCCGGAGCTTGACGCGCTGCTGGAGCGCGCCGTTGCCA AAGGCATCTTCGGCACCAAGATGCGCTCGGTCATCAACGCGGCCAACGCCGAAGGTATCTCCGCCGTCGTTGCCCAGCAG TTTGATGTCGGCCGCCAGATCCTCGGCCACGGCCTGATGCCGATCATCGAGCCGGAAGTGACCATCACCATCGCCGACAA GGCCGAAGCAGAAGAAATCCTCCTCGCCGAAATCCTGAAACAGCTCGACGCGCTCGGCCATGACAAGCAGGTCATGCTGA AGCTCTCGCTGCCGGAGAAGGCAAACATCTACAAGCCGCTCGTCGACCATCCGCGCGTCATGCGCGTCGTGGCCCTCTCG GGCGGCTACAGCCGCGAAGAAGCCAACCGCAAGCTGGCTGAGAATACCGGCATCATCGCCTCTTTCTCGCGCGCGCTGAC CGAAGGCCTCTCCGCCAAGCAGGCCGACAGCGATTTCGATGCCGTGCTCGGCGACACGATCCATTGCATCTGCGAAGCGT CCAAAGCCGGTTGA
Upstream 100 bases:
>100_bases CGGCCCACGCGGCGCAGATTTTGCATTGAGCCGCCACAAAGCGGACAAAAATCCGAGCCAGTAGCCAACACACGAACGAA CGTACCGGGACACAAAACTC
Downstream 100 bases:
>100_bases TCCGATTGCCGCACCTCACGCCTCTTGAGGCGCGGGGAACACGCACCATCTCAAAAGCGCAGCGGGACCCCTCGCTGCGC TTTCTTAACGTCTGGAGGAA
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MLNAQMAKQVAEKPGFIAALDQSGGSTPKALRLYGVEESAYNNDEEMYALIHQMRARIIKSPAFTGEQVVGAILFERTMD GEIDGIPTAEYLWTKRSVVPFLKVDKGLADEKDGVQLMKPMPELDALLERAVAKGIFGTKMRSVINAANAEGISAVVAQQ FDVGRQILGHGLMPIIEPEVTITIADKAEAEEILLAEILKQLDALGHDKQVMLKLSLPEKANIYKPLVDHPRVMRVVALS GGYSREEANRKLAENTGIIASFSRALTEGLSAKQADSDFDAVLGDTIHCICEASKAG
Sequences:
>Translated_297_residues MLNAQMAKQVAEKPGFIAALDQSGGSTPKALRLYGVEESAYNNDEEMYALIHQMRARIIKSPAFTGEQVVGAILFERTMD GEIDGIPTAEYLWTKRSVVPFLKVDKGLADEKDGVQLMKPMPELDALLERAVAKGIFGTKMRSVINAANAEGISAVVAQQ FDVGRQILGHGLMPIIEPEVTITIADKAEAEEILLAEILKQLDALGHDKQVMLKLSLPEKANIYKPLVDHPRVMRVVALS GGYSREEANRKLAENTGIIASFSRALTEGLSAKQADSDFDAVLGDTIHCICEASKAG >Mature_297_residues MLNAQMAKQVAEKPGFIAALDQSGGSTPKALRLYGVEESAYNNDEEMYALIHQMRARIIKSPAFTGEQVVGAILFERTMD GEIDGIPTAEYLWTKRSVVPFLKVDKGLADEKDGVQLMKPMPELDALLERAVAKGIFGTKMRSVINAANAEGISAVVAQQ FDVGRQILGHGLMPIIEPEVTITIADKAEAEEILLAEILKQLDALGHDKQVMLKLSLPEKANIYKPLVDHPRVMRVVALS GGYSREEANRKLAENTGIIASFSRALTEGLSAKQADSDFDAVLGDTIHCICEASKAG
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 - InterPro: IPR023014 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 32205; Mature: 32205
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNAQMAKQVAEKPGFIAALDQSGGSTPKALRLYGVEESAYNNDEEMYALIHQMRARIIK CCCHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHHHHC SPAFTGEQVVGAILFERTMDGEIDGIPTAEYLWTKRSVVPFLKVDKGLADEKDGVQLMKP CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHCC MPELDALLERAVAKGIFGTKMRSVINAANAEGISAVVAQQFDVGRQILGHGLMPIIEPEV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCE TITIADKAEAEEILLAEILKQLDALGHDKQVMLKLSLPEKANIYKPLVDHPRVMRVVALS EEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHCCCHHEEEEEEC GGYSREEANRKLAENTGIIASFSRALTEGLSAKQADSDFDAVLGDTIHCICEASKAG CCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLNAQMAKQVAEKPGFIAALDQSGGSTPKALRLYGVEESAYNNDEEMYALIHQMRARIIK CCCHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHHHHC SPAFTGEQVVGAILFERTMDGEIDGIPTAEYLWTKRSVVPFLKVDKGLADEKDGVQLMKP CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHCC MPELDALLERAVAKGIFGTKMRSVINAANAEGISAVVAQQFDVGRQILGHGLMPIIEPEV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCE TITIADKAEAEEILLAEILKQLDALGHDKQVMLKLSLPEKANIYKPLVDHPRVMRVVALS EEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHCCCHHEEEEEEC GGYSREEANRKLAENTGIIASFSRALTEGLSAKQADSDFDAVLGDTIHCICEASKAG CCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA