| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is ilvA [H]
Identifier: 114797934
GI number: 114797934
Start: 158401
End: 159627
Strand: Reverse
Name: ilvA [H]
Synonym: HNE_0171
Alternate gene names: 114797934
Gene position: 159627-158401 (Counterclockwise)
Preceding gene: 114797610
Following gene: 114797197
Centisome position: 4.31
GC content: 60.8
Gene sequence:
>1227_bases ATGCCTGATACATTGCCTCCCGAACTGCCCGTAACCCTGTCCGACATACAGGCCGCCGCCAAGGTGCTGGAGGGGCAAAT TGAGCGCACAGAGCTCGCCCACTCCAAAACACTGTCGGCAATTACGGGCGCTGAAGTTTGGGTCAAGCTGGAGAACCGGC AGTACACCGCCGCCTTCAAGGAACGCGGCGCGCTGAACAAGCTCTCCAAGCTTTCCGACAATGAGAAGAAATATGGCGTG ATTGCCGCTTCGGCCGGCAACCATGCGCAAGGCGTTGCCTATCACGCCCGTCGCCTTGGTATTCCCGCGACCATCGTGAT GCCGCAGACCACCCCTTTCAACAAGGTTGAGCATACCCGCGATCACGGCGCCCGTGTTCTGTTGGAAGGCATGACATTCG ATGAGGCCAAGGCCCATGCCTATGCCGTCTGCGAGCGTGAAGGCCTGACATTCGTACATCCTTTCGATGATGCAGACATC ATCGCTGGCCAGGGCACTATCGCGCTTGAGATGCTGGCGGACAATCCGGGGCTCGATACGCTGGTTGTGCCAATCGGTGG CGGCGGCCTGATTTCAGGCATAGCCATTGCGGCGAAAGCGCTGAAGCCGGAAATCCGCATCATTGGCGTGCAGACGGCAA TGTATCCGGCCATGCACGCCGCCATGCGCGGCAAACCCGCAAAAACGGGCGGTGCAACGATCGCAGAAGGCATTGCCGTG CGCGATGTTGGGGACATCACCCGGCAGATCTGCGAGCGCATGGTGGATGATGTGGTCCTCGTTGAGGAGGAACACCTCGA ACGCGCCATTACGCTCTTTGTAGAGGTCGAAAAGACGATTGCAGAAGGCGCCGGGGCCGCGGGCCTTGCCGCTCTCCTCG CCCACCCTTCCCGTTTCTATGGACGCAAGGTTGGCCTCGTACTCTGCGGCGGCAATATCGATACGCGCCTGCTGGCCTCT GTTTTGACGCGGGCACTGGTCCGCGAGAACCGACTGGCCCGTATCCGCATCGTCGGAGATGACCGGCCGGGCCTGCTCGC GCTGGTTTCCAAGATCATCGGAGACAATGGCGCCAATATCATGGAAGTCGCCCACAACCGGATTGCGCTGGATGTGCCGG CGAAAGGCGCCGAGTTCGACATCCTGATGGAGACCCGTGACAGCCAGCACACACAGGAAGTCATCGACGCGCTGGCTCAG GCTGGCTACCCGCCGCGCGCCATCTAG
Upstream 100 bases:
>100_bases TTGGGTGGCGGAACATGACCCTGGGAGTGGAACGGCAGGATTGCTTGTAAATTGAACCCCGCCCGCATAGGGTGCGCCCG CTTCTGACCGGACCCTTCCC
Downstream 100 bases:
>100_bases GAACGGCGCGTTACACGTGACTATCACGCTGAACGCGCCTAGAGAGCACGCGACAGTTTTGCCCCTTCAGGAGGTTGCTC CATGTTTCGCGCCCTACTTG
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MPDTLPPELPVTLSDIQAAAKVLEGQIERTELAHSKTLSAITGAEVWVKLENRQYTAAFKERGALNKLSKLSDNEKKYGV IAASAGNHAQGVAYHARRLGIPATIVMPQTTPFNKVEHTRDHGARVLLEGMTFDEAKAHAYAVCEREGLTFVHPFDDADI IAGQGTIALEMLADNPGLDTLVVPIGGGGLISGIAIAAKALKPEIRIIGVQTAMYPAMHAAMRGKPAKTGGATIAEGIAV RDVGDITRQICERMVDDVVLVEEEHLERAITLFVEVEKTIAEGAGAAGLAALLAHPSRFYGRKVGLVLCGGNIDTRLLAS VLTRALVRENRLARIRIVGDDRPGLLALVSKIIGDNGANIMEVAHNRIALDVPAKGAEFDILMETRDSQHTQEVIDALAQ AGYPPRAI
Sequences:
>Translated_408_residues MPDTLPPELPVTLSDIQAAAKVLEGQIERTELAHSKTLSAITGAEVWVKLENRQYTAAFKERGALNKLSKLSDNEKKYGV IAASAGNHAQGVAYHARRLGIPATIVMPQTTPFNKVEHTRDHGARVLLEGMTFDEAKAHAYAVCEREGLTFVHPFDDADI IAGQGTIALEMLADNPGLDTLVVPIGGGGLISGIAIAAKALKPEIRIIGVQTAMYPAMHAAMRGKPAKTGGATIAEGIAV RDVGDITRQICERMVDDVVLVEEEHLERAITLFVEVEKTIAEGAGAAGLAALLAHPSRFYGRKVGLVLCGGNIDTRLLAS VLTRALVRENRLARIRIVGDDRPGLLALVSKIIGDNGANIMEVAHNRIALDVPAKGAEFDILMETRDSQHTQEVIDALAQ AGYPPRAI >Mature_407_residues PDTLPPELPVTLSDIQAAAKVLEGQIERTELAHSKTLSAITGAEVWVKLENRQYTAAFKERGALNKLSKLSDNEKKYGVI AASAGNHAQGVAYHARRLGIPATIVMPQTTPFNKVEHTRDHGARVLLEGMTFDEAKAHAYAVCEREGLTFVHPFDDADII AGQGTIALEMLADNPGLDTLVVPIGGGGLISGIAIAAKALKPEIRIIGVQTAMYPAMHAAMRGKPAKTGGATIAEGIAVR DVGDITRQICERMVDDVVLVEEEHLERAITLFVEVEKTIAEGAGAAGLAALLAHPSRFYGRKVGLVLCGGNIDTRLLASV LTRALVRENRLARIRIVGDDRPGLLALVSKIIGDNGANIMEVAHNRIALDVPAKGAEFDILMETRDSQHTQEVIDALAQA GYPPRAI
Specific function: Acts on both serine and threonine, and properly considered as a hydroxy amino acid deaminase [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=313, Percent_Identity=34.5047923322684, Blast_Score=162, Evalue=4e-40, Organism=Homo sapiens, GI33469958, Length=273, Percent_Identity=30.4029304029304, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI19923959, Length=144, Percent_Identity=36.1111111111111, Blast_Score=79, Evalue=5e-15, Organism=Escherichia coli, GI1789505, Length=318, Percent_Identity=42.1383647798742, Blast_Score=205, Evalue=4e-54, Organism=Escherichia coli, GI1790207, Length=381, Percent_Identity=35.9580052493438, Blast_Score=185, Evalue=4e-48, Organism=Caenorhabditis elegans, GI71991565, Length=404, Percent_Identity=39.3564356435644, Blast_Score=249, Evalue=1e-66, Organism=Caenorhabditis elegans, GI17537387, Length=404, Percent_Identity=33.1683168316832, Blast_Score=172, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17508781, Length=314, Percent_Identity=29.2993630573248, Blast_Score=133, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6320930, Length=341, Percent_Identity=37.2434017595308, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6322631, Length=320, Percent_Identity=35.625, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6319788, Length=267, Percent_Identity=26.2172284644195, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI21355833, Length=407, Percent_Identity=40.2948402948403, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI24645328, Length=301, Percent_Identity=37.2093023255814, Blast_Score=135, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005789 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 43574; Mature: 43443
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDTLPPELPVTLSDIQAAAKVLEGQIERTELAHSKTLSAITGAEVWVKLENRQYTAAFK CCCCCCCCCCEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEHHHH ERGALNKLSKLSDNEKKYGVIAASAGNHAQGVAYHARRLGIPATIVMPQTTPFNKVEHTR HCCHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHH DHGARVLLEGMTFDEAKAHAYAVCEREGLTFVHPFDDADIIAGQGTIALEMLADNPGLDT CCCCEEEEECCCCCHHHHHEEEEEECCCCEEECCCCCCCEEECCCCEEEEEEECCCCCCE LVVPIGGGGLISGIAIAAKALKPEIRIIGVQTAMYPAMHAAMRGKPAKTGGATIAEGIAV EEEEECCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHCCEEH RDVGDITRQICERMVDDVVLVEEEHLERAITLFVEVEKTIAEGAGAAGLAALLAHPSRFY HHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHC GRKVGLVLCGGNIDTRLLASVLTRALVRENRLARIRIVGDDRPGLLALVSKIIGDNGANI CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCCCCHH MEVAHNRIALDVPAKGAEFDILMETRDSQHTQEVIDALAQAGYPPRAI HHHCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PDTLPPELPVTLSDIQAAAKVLEGQIERTELAHSKTLSAITGAEVWVKLENRQYTAAFK CCCCCCCCCEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEHHHH ERGALNKLSKLSDNEKKYGVIAASAGNHAQGVAYHARRLGIPATIVMPQTTPFNKVEHTR HCCHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHH DHGARVLLEGMTFDEAKAHAYAVCEREGLTFVHPFDDADIIAGQGTIALEMLADNPGLDT CCCCEEEEECCCCCHHHHHEEEEEECCCCEEECCCCCCCEEECCCCEEEEEEECCCCCCE LVVPIGGGGLISGIAIAAKALKPEIRIIGVQTAMYPAMHAAMRGKPAKTGGATIAEGIAV EEEEECCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHCCEEH RDVGDITRQICERMVDDVVLVEEEHLERAITLFVEVEKTIAEGAGAAGLAALLAHPSRFY HHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHC GRKVGLVLCGGNIDTRLLASVLTRALVRENRLARIRIVGDDRPGLLALVSKIIGDNGANI CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCCCCHH MEVAHNRIALDVPAKGAEFDILMETRDSQHTQEVIDALAQAGYPPRAI HHHCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA