Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114797856

Identifier: 114797856

GI number: 114797856

Start: 2443047

End: 2444651

Strand: Reverse

Name: 114797856

Synonym: HNE_2339

Alternate gene names: NA

Gene position: 2444651-2443047 (Counterclockwise)

Preceding gene: 114798823

Following gene: 114800505

Centisome position: 65.98

GC content: 61.18

Gene sequence:

>1605_bases
ATGGCGGTCGTCCTTAGCCCGCTGCTGATAATGGGCGCCATACACGCCTGGAGCGAACAGCAGTTTTCCCGGCAGCTCCG
GTTCCATGAACTTCATCAGAGTGCGCAGGATCGCCTGCGCCAGACCGATGCCATGCTGGTGCGCGCCCGCATGGCGCTGC
GCATGATCACGATCGACGACCGGGAGCTGACCTGTAACGAAATCGGTGACCGTCTGGCGGTGCTTGAACTGCCGCTGCGC
AATACCATCCGCTTTGATGCGGACGGCCTGGTGACCTGTAATGAGGTGGGGGAAGGCCTGGTCGGGATGCCGATGCCCCA
GCTCGAATGGAACGACCGGATGCGCAAGGGCGTGGAGTCGTTCGAGGATAGCGGTCAACGCGGCATGGCGCTGGGAGACC
CGGCGATCTACCTGCTGCGCCGGCAGTCTGACGCGCTCGGCAACTATAGCGGATCTATCGCGCTCACCTTGTCGCTGGAG
GATATTGTCGCCCGTATGTCGGGCATGTCCCAGTCCAGTGGGGTGACGGTGTCGCTGGTAGTGCCGGGCGGGCAGGTCAT
CGGCTCCAACATCGTTGCTGGCATTCCCATGGAATGGATCAGTGATGGGGCGGCGCTGAACAAAAGAACCTACCGGCTCC
GGCCCGACCAGGGCCCACCTCTGGATGTGGTGCTGCTGCCTCTTTCGGAAAATGGGCTGTGGCTGATGGTGGGATCACCC
GCGCCGCCCCAGCGCGTGGAGGTCATTCTCGCCTTTCTGGTGCCGATCCTGGCCTATCTCGCGGCGCTTCTGGCGGCCAG
CTGGATTGCCGACGCCATGGTACTGCGTTGGCTGGAGCGGATACGCCTGCGGATCTTGGATATGCGCAGCTCGGCCCGAT
ATGCGCTGCTTGCGCCAGAGCTGTCGCGCGCGCCTCTGGAGGTACAGCAGGTCGCCGAAGCCTTTGACGACCTGACCAGC
CGTGTTTCAAAACATGAGTCAGACCTGCAACTGGCGCTCGTCCAGATGAAGGCGGCGTTCCGTGAAGTGCACCACCGCGT
AAAAAATAACCTGCAGGTGATGCTCAGCATGCTGAAGCTGCAAGGTCGGGGCGAGGCACTGCCTGAAACCCAAAGCGCTC
TCAAGGTGGCCGCTCATCGTGTGGCGATGATGGCGGCGGTGCATCATACCCTTCTGAACGAGGGAGACCTTGATACGGTT
GAAGCGCTCGACCTGTTCAATGCCATCTGCAACCAGGTGGATGAACAGAAAGGTTGGGGTGAAGGCGGCCGGCAAATCAT
TCCGGATGTTACGCCCGGCCCGCTGCCTGCAGATCTTGCCGTTCCCGTGGGAATGTTCGTGCTGGAATCTGTAAGCCTGC
TTTGCCCGGAAGCGGATGAGGACGAGGTCGCAGATGTTACGTTGCATTTCGACCGGGAGCATGGCGATTGCCGACTGGCG
CTCACCTGTGGCGGCGGTGAGGAAGGCTCCGTTGAGATGGACCGGGATACCAGCCTGTTTCTCTCAGCCTTTGCCCGTCA
GATTGGTGGAACCGTTTCGGTCAATGCCCAGGAAGATGGCCGGATTGCCATTGAACTGTTGTTCTCCATCCCGGTTCCGG
ACTGA

Upstream 100 bases:

>100_bases
AGGTTGACGTCCTCAGCCGCCATAACGGATGACGGTAGTCAGCGGGGAAGGACGCGCCAAGCGCAGGCGCCTGAGCCTCA
GGCTTCAGGTAATTTCTGCC

Downstream 100 bases:

>100_bases
TCCGACGGTCCTTCAGATACGTAGACAAAGAAAAAGGCGCGCCTCGGGAGGCGCGCCTTTATGTCTGGATATTGGACTGT
TGATTAGTCCGTAAGTTCGT

Product: sensor histidine kinase

Products: NA

Alternate protein names: Sensor Histidine Kinase; Sensory Transduction Protein Kinase; Sensory Transduction Histidine Kinase; Two Component Hybrid Sensor Histidine Kinase And Regulator

Number of amino acids: Translated: 534; Mature: 533

Protein sequence:

>534_residues
MAVVLSPLLIMGAIHAWSEQQFSRQLRFHELHQSAQDRLRQTDAMLVRARMALRMITIDDRELTCNEIGDRLAVLELPLR
NTIRFDADGLVTCNEVGEGLVGMPMPQLEWNDRMRKGVESFEDSGQRGMALGDPAIYLLRRQSDALGNYSGSIALTLSLE
DIVARMSGMSQSSGVTVSLVVPGGQVIGSNIVAGIPMEWISDGAALNKRTYRLRPDQGPPLDVVLLPLSENGLWLMVGSP
APPQRVEVILAFLVPILAYLAALLAASWIADAMVLRWLERIRLRILDMRSSARYALLAPELSRAPLEVQQVAEAFDDLTS
RVSKHESDLQLALVQMKAAFREVHHRVKNNLQVMLSMLKLQGRGEALPETQSALKVAAHRVAMMAAVHHTLLNEGDLDTV
EALDLFNAICNQVDEQKGWGEGGRQIIPDVTPGPLPADLAVPVGMFVLESVSLLCPEADEDEVADVTLHFDREHGDCRLA
LTCGGGEEGSVEMDRDTSLFLSAFARQIGGTVSVNAQEDGRIAIELLFSIPVPD

Sequences:

>Translated_534_residues
MAVVLSPLLIMGAIHAWSEQQFSRQLRFHELHQSAQDRLRQTDAMLVRARMALRMITIDDRELTCNEIGDRLAVLELPLR
NTIRFDADGLVTCNEVGEGLVGMPMPQLEWNDRMRKGVESFEDSGQRGMALGDPAIYLLRRQSDALGNYSGSIALTLSLE
DIVARMSGMSQSSGVTVSLVVPGGQVIGSNIVAGIPMEWISDGAALNKRTYRLRPDQGPPLDVVLLPLSENGLWLMVGSP
APPQRVEVILAFLVPILAYLAALLAASWIADAMVLRWLERIRLRILDMRSSARYALLAPELSRAPLEVQQVAEAFDDLTS
RVSKHESDLQLALVQMKAAFREVHHRVKNNLQVMLSMLKLQGRGEALPETQSALKVAAHRVAMMAAVHHTLLNEGDLDTV
EALDLFNAICNQVDEQKGWGEGGRQIIPDVTPGPLPADLAVPVGMFVLESVSLLCPEADEDEVADVTLHFDREHGDCRLA
LTCGGGEEGSVEMDRDTSLFLSAFARQIGGTVSVNAQEDGRIAIELLFSIPVPD
>Mature_533_residues
AVVLSPLLIMGAIHAWSEQQFSRQLRFHELHQSAQDRLRQTDAMLVRARMALRMITIDDRELTCNEIGDRLAVLELPLRN
TIRFDADGLVTCNEVGEGLVGMPMPQLEWNDRMRKGVESFEDSGQRGMALGDPAIYLLRRQSDALGNYSGSIALTLSLED
IVARMSGMSQSSGVTVSLVVPGGQVIGSNIVAGIPMEWISDGAALNKRTYRLRPDQGPPLDVVLLPLSENGLWLMVGSPA
PPQRVEVILAFLVPILAYLAALLAASWIADAMVLRWLERIRLRILDMRSSARYALLAPELSRAPLEVQQVAEAFDDLTSR
VSKHESDLQLALVQMKAAFREVHHRVKNNLQVMLSMLKLQGRGEALPETQSALKVAAHRVAMMAAVHHTLLNEGDLDTVE
ALDLFNAICNQVDEQKGWGEGGRQIIPDVTPGPLPADLAVPVGMFVLESVSLLCPEADEDEVADVTLHFDREHGDCRLAL
TCGGGEEGSVEMDRDTSLFLSAFARQIGGTVSVNAQEDGRIAIELLFSIPVPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58493; Mature: 58362

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVVLSPLLIMGAIHAWSEQQFSRQLRFHELHQSAQDRLRQTDAMLVRARMALRMITIDD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
RELTCNEIGDRLAVLELPLRNTIRFDADGLVTCNEVGEGLVGMPMPQLEWNDRMRKGVES
CCCCHHHHCCEEEEEECCCCCCEEECCCCCEEHHHHCCCCCCCCCCCCCHHHHHHHHHHH
FEDSGQRGMALGDPAIYLLRRQSDALGNYSGSIALTLSLEDIVARMSGMSQSSGVTVSLV
HHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCEEEEEE
VPGGQVIGSNIVAGIPMEWISDGAALNKRTYRLRPDQGPPLDVVLLPLSENGLWLMVGSP
ECCCCEECCCCEECCCHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCEEEEECCC
APPQRVEVILAFLVPILAYLAALLAASWIADAMVLRWLERIRLRILDMRSSARYALLAPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
LSRAPLEVQQVAEAFDDLTSRVSKHESDLQLALVQMKAAFREVHHRVKNNLQVMLSMLKL
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGRGEALPETQSALKVAAHRVAMMAAVHHTLLNEGDLDTVEALDLFNAICNQVDEQKGWG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
EGGRQIIPDVTPGPLPADLAVPVGMFVLESVSLLCPEADEDEVADVTLHFDREHGDCRLA
CCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEEEE
LTCGGGEEGSVEMDRDTSLFLSAFARQIGGTVSVNAQEDGRIAIELLFSIPVPD
EEECCCCCCCEEECCCHHHHHHHHHHHHCCEEEECCCCCCCEEEEEEEECCCCC
>Mature Secondary Structure 
AVVLSPLLIMGAIHAWSEQQFSRQLRFHELHQSAQDRLRQTDAMLVRARMALRMITIDD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
RELTCNEIGDRLAVLELPLRNTIRFDADGLVTCNEVGEGLVGMPMPQLEWNDRMRKGVES
CCCCHHHHCCEEEEEECCCCCCEEECCCCCEEHHHHCCCCCCCCCCCCCHHHHHHHHHHH
FEDSGQRGMALGDPAIYLLRRQSDALGNYSGSIALTLSLEDIVARMSGMSQSSGVTVSLV
HHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCEEEEEE
VPGGQVIGSNIVAGIPMEWISDGAALNKRTYRLRPDQGPPLDVVLLPLSENGLWLMVGSP
ECCCCEECCCCEECCCHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCEEEEECCC
APPQRVEVILAFLVPILAYLAALLAASWIADAMVLRWLERIRLRILDMRSSARYALLAPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
LSRAPLEVQQVAEAFDDLTSRVSKHESDLQLALVQMKAAFREVHHRVKNNLQVMLSMLKL
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGRGEALPETQSALKVAAHRVAMMAAVHHTLLNEGDLDTVEALDLFNAICNQVDEQKGWG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
EGGRQIIPDVTPGPLPADLAVPVGMFVLESVSLLCPEADEDEVADVTLHFDREHGDCRLA
CCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEEEE
LTCGGGEEGSVEMDRDTSLFLSAFARQIGGTVSVNAQEDGRIAIELLFSIPVPD
EEECCCCCCCEEECCCHHHHHHHHHHHHCCEEEECCCCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA