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The map label for this gene is oppB [H]

Identifier: 114797841

GI number: 114797841

Start: 3037168

End: 3038139

Strand: Direct

Name: oppB [H]

Synonym: HNE_2879

Alternate gene names: 114797841

Gene position: 3037168-3038139 (Clockwise)

Preceding gene: 114800192

Following gene: 114797484

Centisome position: 81.97

GC content: 63.89

Gene sequence:

>972_bases
GTGACAACGCTTCAGCGCGCTTTTGGACGTATTCCGTGGGGCTATACGCTCCGGCGCCTGCTGATCGCAATCCCTACGAT
GCTTGCGATCATCACGGTGGCTTTCCTGATGATGCGCGCCGCGCCGGGCGGACCGTTCGACGGCGAGCGCAAACTCCCCC
CCGCCACAGAAGCGGCCATCGCGGCAAAATTCGGCCTCGATAAGCCCCTTCACGAGCAATATTTTAACTATGTGGCCGGC
GTCGCCCAGGGCGATTTCGGCCCCTCCTACAAGACGCTCGGCAAGAGCGTGAACGACCTGATCTCCGATGGCCTGCCCAT
CTCGATGACGATCGGCGCCCTCACCATGCTCGTCGCCCTCACGGTCGGCACCTCGCTCGGCATCTTTGCCGGGCTCCGGC
AGAATACGGCGGCTGACTACGGCGTCATGGGCTTTGCCATGTTCGGCATTTCGGTGCCCACCTTCGTCACCGGGCCCATC
CTCATCCTGCTGCTCTCGCTCGGCGCCGGCATCTTTGCGGTCGGCGGCCTCGGCACCTGGCCCAACATCGGCATGAGTTG
GCATAACATGACCCTGCCGGTGCTCACCCTCGCCCTCCCCCAGATCGCCATCATCTCGCGCCTGATGCGCGCCTCGATGA
TCGAGACGATGCGCGCCAACCACATCCGCACGGCCCGCGCGAAGGGCCTCGCCGAGCGCGACGTGATCGTCCGCCATGCG
CTCCCCTCCGCGCTCCTGCCGCTCGTTTCCTATGCCGGCCCGGCGATGGCCGGCGTCATGACCGGCTCGGTCGTCATCGA
GAAGATATTCGGTCTGCCGGGCCTTGGCAGCTATTTCGTCGATGGCGCGCTCAACCGGGATTACACGCTCGTGATGGGCG
CCATCATTGTCTACGCCGCCCTCATCATCGTGCTCAACCTCGTCGCAGACATCCTTTACGCGATGCTCGACCCCAAAGTG
AAATACGACTGA

Upstream 100 bases:

>100_bases
TGATCGGTCTGCCCGACAAGCTAAGGAGTGTTGGGTGTCCTGCCAAGCTGGCTGATGGGCGGGGCCGTTCAACCCACTGT
GACAAGAGGCTTTTTTACTT

Downstream 100 bases:

>100_bases
TGGCGCATATCGACCCCATGCTCGATCCCACCGGCCGTGTCGAAGCGGTCCAGACGGCCATCGCCGGGGGCCGCTCCCTG
TGGGACGACGCCCGCGCCCG

Product: oligopeptide ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MTTLQRAFGRIPWGYTLRRLLIAIPTMLAIITVAFLMMRAAPGGPFDGERKLPPATEAAIAAKFGLDKPLHEQYFNYVAG
VAQGDFGPSYKTLGKSVNDLISDGLPISMTIGALTMLVALTVGTSLGIFAGLRQNTAADYGVMGFAMFGISVPTFVTGPI
LILLLSLGAGIFAVGGLGTWPNIGMSWHNMTLPVLTLALPQIAIISRLMRASMIETMRANHIRTARAKGLAERDVIVRHA
LPSALLPLVSYAGPAMAGVMTGSVVIEKIFGLPGLGSYFVDGALNRDYTLVMGAIIVYAALIIVLNLVADILYAMLDPKV
KYD

Sequences:

>Translated_323_residues
MTTLQRAFGRIPWGYTLRRLLIAIPTMLAIITVAFLMMRAAPGGPFDGERKLPPATEAAIAAKFGLDKPLHEQYFNYVAG
VAQGDFGPSYKTLGKSVNDLISDGLPISMTIGALTMLVALTVGTSLGIFAGLRQNTAADYGVMGFAMFGISVPTFVTGPI
LILLLSLGAGIFAVGGLGTWPNIGMSWHNMTLPVLTLALPQIAIISRLMRASMIETMRANHIRTARAKGLAERDVIVRHA
LPSALLPLVSYAGPAMAGVMTGSVVIEKIFGLPGLGSYFVDGALNRDYTLVMGAIIVYAALIIVLNLVADILYAMLDPKV
KYD
>Mature_322_residues
TTLQRAFGRIPWGYTLRRLLIAIPTMLAIITVAFLMMRAAPGGPFDGERKLPPATEAAIAAKFGLDKPLHEQYFNYVAGV
AQGDFGPSYKTLGKSVNDLISDGLPISMTIGALTMLVALTVGTSLGIFAGLRQNTAADYGVMGFAMFGISVPTFVTGPIL
ILLLSLGAGIFAVGGLGTWPNIGMSWHNMTLPVLTLALPQIAIISRLMRASMIETMRANHIRTARAKGLAERDVIVRHAL
PSALLPLVSYAGPAMAGVMTGSVVIEKIFGLPGLGSYFVDGALNRDYTLVMGAIIVYAALIIVLNLVADILYAMLDPKVK
YD

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=308, Percent_Identity=50, Blast_Score=308, Evalue=3e-85,
Organism=Escherichia coli, GI1789965, Length=336, Percent_Identity=32.4404761904762, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1787053, Length=315, Percent_Identity=33.3333333333333, Blast_Score=184, Evalue=5e-48,
Organism=Escherichia coli, GI1789888, Length=312, Percent_Identity=32.0512820512821, Blast_Score=168, Evalue=4e-43,
Organism=Escherichia coli, GI1788504, Length=361, Percent_Identity=29.0858725761773, Blast_Score=167, Evalue=8e-43,
Organism=Escherichia coli, GI1787761, Length=333, Percent_Identity=29.4294294294294, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1787550, Length=328, Percent_Identity=26.5243902439024, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34371; Mature: 34239

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTLQRAFGRIPWGYTLRRLLIAIPTMLAIITVAFLMMRAAPGGPFDGERKLPPATEAAI
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH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HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]