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The map label for this gene is oppC [H]

Identifier: 114797484

GI number: 114797484

Start: 3038139

End: 3039050

Strand: Direct

Name: oppC [H]

Synonym: HNE_2880

Alternate gene names: 114797484

Gene position: 3038139-3039050 (Clockwise)

Preceding gene: 114797841

Following gene: 114798212

Centisome position: 82.0

GC content: 65.46

Gene sequence:

>912_bases
ATGGCGCATATCGACCCCATGCTCGATCCCACCGGCCGTGTCGAAGCGGTCCAGACGGCCATCGCCGGGGGCCGCTCCCT
GTGGGACGACGCCCGCGCCCGCCTGATGCGCAACCGCGCCGCCGTCGTCTCGATGTGGATCATCGGCTTCCTCGTCCTGG
TCGCCATCTTCGGCCCCATGGTCTGGGTGCATGACTACCGCACGATTTCTGATCTGCGCACCATCGCGCCCACCCTCGAA
AACTGGCACATCTTCGGCACCGATCTTCAGGGCCGCGATCTCTTCGCGCGCACCATGATCGGCCTGCGTATCTCGCTGCT
GGTCGGCGTCGTCGCCACCGCCGTCTCCCTCGTCATCGGCGTCACCTGGGGCGCCACCGCCGGCTATCTCGGCGGGCGCA
TCGACAATGTCATGATGCGCTTCGTCGATGTGCTCTACGCCCTGCCCTTCATCTTCTTCGTCATCCTGCTGCTCACCGTG
TTCGAGCGCAACATCGTGCTGATCTTCGCCGCCATCGGCGCCATCGAATGGCTGACGATGAGCCGCATCGTCCGGGGCCA
GACCCTCGCCATCAAGGGCAAGGAATTCATCGAGGCCGCCCGCGCCGCCGGCGTCTCCCGGCGCGGCATCATCTTCCGCC
ATATCCTGCCCAACGTCATCGGCCCGGTGGCTGTCTATGTCACCCTCACCATCCCGGTCGTGATCCTGGCAGAGAGCTTC
CTGTCCTTCCTGGGCCTCGGCGTGAACGAACCGCTCACCTCGCTCGGCGTGCTGATTTCCGACGGCGCCAAGGTGATGGA
AGACAAACCCTGGATGCTGCTGCTGCCCGCCGGCATCATGTCGGTCGCGCTCCTCTGCCTGAACTTCATCGGCGACGGCC
TGCGCGACGCCCTCGACCCCAAAGAACGCTGA

Upstream 100 bases:

>100_bases
TGATGGGCGCCATCATTGTCTACGCCGCCCTCATCATCGTGCTCAACCTCGTCGCAGACATCCTTTACGCGATGCTCGAC
CCCAAAGTGAAATACGACTG

Downstream 100 bases:

>100_bases
AGGCTCCGCCCATGCGCCGCCTCGCCGCCCTTTTCCTGGCCTTGACGGCGCTGATCGCGGCCCCAGCCTGCGCCACGCCG
CCCCTGACGGAGCCTGCCAT

Product: oligopeptide ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MAHIDPMLDPTGRVEAVQTAIAGGRSLWDDARARLMRNRAAVVSMWIIGFLVLVAIFGPMVWVHDYRTISDLRTIAPTLE
NWHIFGTDLQGRDLFARTMIGLRISLLVGVVATAVSLVIGVTWGATAGYLGGRIDNVMMRFVDVLYALPFIFFVILLLTV
FERNIVLIFAAIGAIEWLTMSRIVRGQTLAIKGKEFIEAARAAGVSRRGIIFRHILPNVIGPVAVYVTLTIPVVILAESF
LSFLGLGVNEPLTSLGVLISDGAKVMEDKPWMLLLPAGIMSVALLCLNFIGDGLRDALDPKER

Sequences:

>Translated_303_residues
MAHIDPMLDPTGRVEAVQTAIAGGRSLWDDARARLMRNRAAVVSMWIIGFLVLVAIFGPMVWVHDYRTISDLRTIAPTLE
NWHIFGTDLQGRDLFARTMIGLRISLLVGVVATAVSLVIGVTWGATAGYLGGRIDNVMMRFVDVLYALPFIFFVILLLTV
FERNIVLIFAAIGAIEWLTMSRIVRGQTLAIKGKEFIEAARAAGVSRRGIIFRHILPNVIGPVAVYVTLTIPVVILAESF
LSFLGLGVNEPLTSLGVLISDGAKVMEDKPWMLLLPAGIMSVALLCLNFIGDGLRDALDPKER
>Mature_302_residues
AHIDPMLDPTGRVEAVQTAIAGGRSLWDDARARLMRNRAAVVSMWIIGFLVLVAIFGPMVWVHDYRTISDLRTIAPTLEN
WHIFGTDLQGRDLFARTMIGLRISLLVGVVATAVSLVIGVTWGATAGYLGGRIDNVMMRFVDVLYALPFIFFVILLLTVF
ERNIVLIFAAIGAIEWLTMSRIVRGQTLAIKGKEFIEAARAAGVSRRGIIFRHILPNVIGPVAVYVTLTIPVVILAESFL
SFLGLGVNEPLTSLGVLISDGAKVMEDKPWMLLLPAGIMSVALLCLNFIGDGLRDALDPKER

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=281, Percent_Identity=57.6512455516014, Blast_Score=295, Evalue=3e-81,
Organism=Escherichia coli, GI1787054, Length=279, Percent_Identity=35.4838709677419, Blast_Score=171, Evalue=8e-44,
Organism=Escherichia coli, GI1787760, Length=285, Percent_Identity=32.6315789473684, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1788505, Length=228, Percent_Identity=36.8421052631579, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1789889, Length=229, Percent_Identity=31.0043668122271, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1789964, Length=274, Percent_Identity=33.2116788321168, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1787549, Length=276, Percent_Identity=24.6376811594203, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33167; Mature: 33036

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHIDPMLDPTGRVEAVQTAIAGGRSLWDDARARLMRNRAAVVSMWIIGFLVLVAIFGPM
CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWVHDYRTISDLRTIAPTLENWHIFGTDLQGRDLFARTMIGLRISLLVGVVATAVSLVIG
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTWGATAGYLGGRIDNVMMRFVDVLYALPFIFFVILLLTVFERNIVLIFAAIGAIEWLTM
HHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
SRIVRGQTLAIKGKEFIEAARAAGVSRRGIIFRHILPNVIGPVAVYVTLTIPVVILAESF
HHHHCCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFLGLGVNEPLTSLGVLISDGAKVMEDKPWMLLLPAGIMSVALLCLNFIGDGLRDALDP
HHHHCCCCCCCHHHHHHHHCCCCHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCC
KER
CCC
>Mature Secondary Structure 
AHIDPMLDPTGRVEAVQTAIAGGRSLWDDARARLMRNRAAVVSMWIIGFLVLVAIFGPM
CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWVHDYRTISDLRTIAPTLENWHIFGTDLQGRDLFARTMIGLRISLLVGVVATAVSLVIG
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTWGATAGYLGGRIDNVMMRFVDVLYALPFIFFVILLLTVFERNIVLIFAAIGAIEWLTM
HHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
SRIVRGQTLAIKGKEFIEAARAAGVSRRGIIFRHILPNVIGPVAVYVTLTIPVVILAESF
HHHHCCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFLGLGVNEPLTSLGVLISDGAKVMEDKPWMLLLPAGIMSVALLCLNFIGDGLRDALDP
HHHHCCCCCCCHHHHHHHHCCCCHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCC
KER
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]