| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797781
Identifier: 114797781
GI number: 114797781
Start: 2576003
End: 2578636
Strand: Reverse
Name: 114797781
Synonym: HNE_2456
Alternate gene names: NA
Gene position: 2578636-2576003 (Counterclockwise)
Preceding gene: 114798767
Following gene: 114799899
Centisome position: 69.6
GC content: 55.28
Gene sequence:
>2634_bases GTGATATACGATCTGAGAAAGAAACTGTTGTGGAGTGTCGGGGCCGTATTGGTTTCGGCCAGTTTTGCTGCGCCTGTCAT GGCGCAGACCGAGGCTGCAGAAGAAGATGAAGCCCGCCTCAGCACGGTGCTGGTCGAGGGCCGCCGCGTGGACGAAGCGA CGCCCCTGGCGATTGATATGGTTCAGTTCGGCAATCAGGTTCAGTTGATTGATGCTGAAAAAATCGAAACCGGCGGGTTT ACAAATTTCGGCGAGGCCGCAGCCGGTCTGATCCGCGGTGCCAACATCGGTTACTCGCCTGATGAAGGCGAATTCACGAT CCGCATTGACGGCGGAACTGACCGGGACACGCTGTTGCTGGTCGACGGCGTTCCCTACTTTGACCGGTCCAGCCCGTCAG AAGATCTTTGGCCAGCCACGGCCATTGATCCGCGCATGATTGATAGTGTCGAAGTCTATCGCGGCGGCCAATCGTTGTAC TTTGGATCAAACGGTGGGTTGGGTGTCGTCAGTGTAAAGACAAAAGAACCGGATGGCACCAAAAAGGGTCAAATCGGTGT CTATGGCGGTTCGTTCAAGACGCGCGAGATTTATGGCAACGTGTCTATGCCGATTGATGCGGAAGGAAAGCATAGCTTCC TCGTCTATGGCCGCTCCTATCATTCCGATGCACATGAACTCTTCGATGTTTCTGCTTTCGGGGACAACGTCCTCGCGCTT GGCGGATTTCAGCCATATCCCTATGACTTCAACAGCCTGGGCGCTAAATACCTCTGGCAAATTGATGCAACTTCGGAGCT CCGCCTCGGAGCGAGCTTCTCGACCATCGATTTCCATGACTCCTTCCCAAACTCGACAGTATTTGCGCAGAACTTCACGG AGTTCCCGATCTATACCGCAAACTACGAGAAGTCGTTCTCGGACAATTTCCGGATCGAAGTTGACTCCCACTGGCAGAAG CCTCAGCTGAAAAATCACGAAGTTTTGGCTCGCGTCTGCCGCACGCCCCGTCTTCAGGACTTGCCGGAAAATGTGCGTGC GCTTGCTTCCGAACAGGGGATTACCGATTTCGCTTCCGCAGCCCAATTCGAGGCATTTGCGGCGACTGTGCCAAATCTTT CGGCTGGATGTGTCACAAATCCTTATGGCACGACGGGCGGAGCGGCGACCAGCGCGCAGAATGGTTGGATGGTGAACCAA GACCCCAACAGCCCCTATTTCGGGCAAGCGTATGGAACAGTTCAAAATCCGTTCCCGATCGGCGCGCCTATCGGATACAT GGTTGAGACGACGACGTCTTTTGGAGACAATACTCCGGTCAAGGGCTTTGGATCTACGGACAATCGCCGGTCAGGCTATA TTGATTACGGCATCAATGCCCGCGGCACCTATCGGCTCAATGACCTGGTCGAAGTTGTTGGTGGCCTTCAGTACACAGCC TATGAAGATGCCTCCGATGACTCTTTCGGGGTCAAGGATACCAAGGTCACCACGACCGGCGTCTATGGCGATCTGCGTCT CAGCCTCCCGGTTCTGGAGGGGCTCAACGGTTCTTTCGCAATCCGTCAGGATTTCAATGACGGCTTCGATGACCAAATGA TCTACAAGGTCGGCCTTCGCCAGAATCTTCCGGCCGGATTTTACGCGCGCGCCAGTGGCGGTACATCCTACTCCGCTCCC AAGATTGACGAGATAGGCGCCTATGGGGCCAATCAAAATCTCAATCCTGGGCTTGAGCCGCAGTCAGTCGAAGCCCTCAA TGCCGGCTTCGGGATGGACGGCACATTCGGTGATGCGACATTCAACATCGAGCTGGGCTACTTTCAGACAGATATTGAAA ATCTCTTCGGCACACGGTCGGTAGAGTCAGTCTGCCTTCAATACGAAGGAAACCCATTCGATCTCGACATCATCAATCGC AACCGCGAGAACATTGTTCCTCCCGATGCGTTCTGCTCCACAGCCGCAAGCAGCGGGCTCGATGGCGCAGAAGTTGTCGC GGTCAACACGCGCGCGATCCAGGAAATTGAGGGGTTCACGGTCGATCTGGCATTCGATTATGGCGCATTCTCCGGGGACC TTTCCTATACCATGATGGACTCTCTTGAGCCCAATCCGGTGTTCGGCCTTCCTGCGCGCCTTGATGGCACAACGACGGAT CTCGATTTCGTTACACCGGGTGCTGCGGGATCAGATGAAAAGCGCCAATCTGGCGAACGTCCAGAATGGACACTATCAGC GCTGCTGACCTACAAGCCGACCGAGCAATGGATATTTGCGCTCAACCCGCGCCTTCAGGGTGCGGAGTGGGCTCACGCTC CAACGACAGCGGCTCGCCTGGTTGACGCGGATGGCAACCGCGTAGTCGACGATGTAAATTTTGGCGATTACTTCGTGCTC AATGGCTCCATTCAGTATTTCTTCGGCGAGGACCGTCAACACCGCATTCTGATCCGCGGCGTGAATCTGCTCGATGAAGG TTACTATGAGCGATACTCTGGCGGTGCTTCCTTGACGCTCGACAGAGCCGTTGTGCGCGGCGAGATCGGCGTCAACGACA GTGCATATTATCGCCAATACGGCTGGAACGGAAAACCCCGCTCGGCCTGGGTGCAGTATGAGTACCGCTTCTGA
Upstream 100 bases:
>100_bases GTGCCGGTAACCCAACTCCTGCGCGGTGAGAAGACCTGCGCCAAGCATTTGCGGCTGTACCGGCGCGGTCCGGTTCAGCC TGAACCTCGGAGGGGTGACG
Downstream 100 bases:
>100_bases TCTGGCGTGGCGGTGAGGGTAAGCCTCACCGCCTTGTCATCCCGGCTGGCCGCTGCCCCCGGAGTGGCCAGCCGGCCCTT CTCCTCTCATCGATCATTCG
Product: outer membrane receptor (OMR) family protein
Products: NA
Alternate protein names: NB-Dependent Receptor For Transport Vitamin B; Receptor; Outer Membrane Receptor For Ferrienterochelin And Colicins; Outer Membrane Receptor Family Protein; Nb-Dependent Receptor Plug
Number of amino acids: Translated: 877; Mature: 877
Protein sequence:
>877_residues MIYDLRKKLLWSVGAVLVSASFAAPVMAQTEAAEEDEARLSTVLVEGRRVDEATPLAIDMVQFGNQVQLIDAEKIETGGF TNFGEAAAGLIRGANIGYSPDEGEFTIRIDGGTDRDTLLLVDGVPYFDRSSPSEDLWPATAIDPRMIDSVEVYRGGQSLY FGSNGGLGVVSVKTKEPDGTKKGQIGVYGGSFKTREIYGNVSMPIDAEGKHSFLVYGRSYHSDAHELFDVSAFGDNVLAL GGFQPYPYDFNSLGAKYLWQIDATSELRLGASFSTIDFHDSFPNSTVFAQNFTEFPIYTANYEKSFSDNFRIEVDSHWQK PQLKNHEVLARVCRTPRLQDLPENVRALASEQGITDFASAAQFEAFAATVPNLSAGCVTNPYGTTGGAATSAQNGWMVNQ DPNSPYFGQAYGTVQNPFPIGAPIGYMVETTTSFGDNTPVKGFGSTDNRRSGYIDYGINARGTYRLNDLVEVVGGLQYTA YEDASDDSFGVKDTKVTTTGVYGDLRLSLPVLEGLNGSFAIRQDFNDGFDDQMIYKVGLRQNLPAGFYARASGGTSYSAP KIDEIGAYGANQNLNPGLEPQSVEALNAGFGMDGTFGDATFNIELGYFQTDIENLFGTRSVESVCLQYEGNPFDLDIINR NRENIVPPDAFCSTAASSGLDGAEVVAVNTRAIQEIEGFTVDLAFDYGAFSGDLSYTMMDSLEPNPVFGLPARLDGTTTD LDFVTPGAAGSDEKRQSGERPEWTLSALLTYKPTEQWIFALNPRLQGAEWAHAPTTAARLVDADGNRVVDDVNFGDYFVL NGSIQYFFGEDRQHRILIRGVNLLDEGYYERYSGGASLTLDRAVVRGEIGVNDSAYYRQYGWNGKPRSAWVQYEYRF
Sequences:
>Translated_877_residues MIYDLRKKLLWSVGAVLVSASFAAPVMAQTEAAEEDEARLSTVLVEGRRVDEATPLAIDMVQFGNQVQLIDAEKIETGGF TNFGEAAAGLIRGANIGYSPDEGEFTIRIDGGTDRDTLLLVDGVPYFDRSSPSEDLWPATAIDPRMIDSVEVYRGGQSLY FGSNGGLGVVSVKTKEPDGTKKGQIGVYGGSFKTREIYGNVSMPIDAEGKHSFLVYGRSYHSDAHELFDVSAFGDNVLAL GGFQPYPYDFNSLGAKYLWQIDATSELRLGASFSTIDFHDSFPNSTVFAQNFTEFPIYTANYEKSFSDNFRIEVDSHWQK PQLKNHEVLARVCRTPRLQDLPENVRALASEQGITDFASAAQFEAFAATVPNLSAGCVTNPYGTTGGAATSAQNGWMVNQ DPNSPYFGQAYGTVQNPFPIGAPIGYMVETTTSFGDNTPVKGFGSTDNRRSGYIDYGINARGTYRLNDLVEVVGGLQYTA YEDASDDSFGVKDTKVTTTGVYGDLRLSLPVLEGLNGSFAIRQDFNDGFDDQMIYKVGLRQNLPAGFYARASGGTSYSAP KIDEIGAYGANQNLNPGLEPQSVEALNAGFGMDGTFGDATFNIELGYFQTDIENLFGTRSVESVCLQYEGNPFDLDIINR NRENIVPPDAFCSTAASSGLDGAEVVAVNTRAIQEIEGFTVDLAFDYGAFSGDLSYTMMDSLEPNPVFGLPARLDGTTTD LDFVTPGAAGSDEKRQSGERPEWTLSALLTYKPTEQWIFALNPRLQGAEWAHAPTTAARLVDADGNRVVDDVNFGDYFVL NGSIQYFFGEDRQHRILIRGVNLLDEGYYERYSGGASLTLDRAVVRGEIGVNDSAYYRQYGWNGKPRSAWVQYEYRF >Mature_877_residues MIYDLRKKLLWSVGAVLVSASFAAPVMAQTEAAEEDEARLSTVLVEGRRVDEATPLAIDMVQFGNQVQLIDAEKIETGGF TNFGEAAAGLIRGANIGYSPDEGEFTIRIDGGTDRDTLLLVDGVPYFDRSSPSEDLWPATAIDPRMIDSVEVYRGGQSLY FGSNGGLGVVSVKTKEPDGTKKGQIGVYGGSFKTREIYGNVSMPIDAEGKHSFLVYGRSYHSDAHELFDVSAFGDNVLAL GGFQPYPYDFNSLGAKYLWQIDATSELRLGASFSTIDFHDSFPNSTVFAQNFTEFPIYTANYEKSFSDNFRIEVDSHWQK PQLKNHEVLARVCRTPRLQDLPENVRALASEQGITDFASAAQFEAFAATVPNLSAGCVTNPYGTTGGAATSAQNGWMVNQ DPNSPYFGQAYGTVQNPFPIGAPIGYMVETTTSFGDNTPVKGFGSTDNRRSGYIDYGINARGTYRLNDLVEVVGGLQYTA YEDASDDSFGVKDTKVTTTGVYGDLRLSLPVLEGLNGSFAIRQDFNDGFDDQMIYKVGLRQNLPAGFYARASGGTSYSAP KIDEIGAYGANQNLNPGLEPQSVEALNAGFGMDGTFGDATFNIELGYFQTDIENLFGTRSVESVCLQYEGNPFDLDIINR NRENIVPPDAFCSTAASSGLDGAEVVAVNTRAIQEIEGFTVDLAFDYGAFSGDLSYTMMDSLEPNPVFGLPARLDGTTTD LDFVTPGAAGSDEKRQSGERPEWTLSALLTYKPTEQWIFALNPRLQGAEWAHAPTTAARLVDADGNRVVDDVNFGDYFVL NGSIQYFFGEDRQHRILIRGVNLLDEGYYERYSGGASLTLDRAVVRGEIGVNDSAYYRQYGWNGKPRSAWVQYEYRF
Specific function: Unknown
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95811; Mature: 95811
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYDLRKKLLWSVGAVLVSASFAAPVMAQTEAAEEDEARLSTVLVEGRRVDEATPLAIDM CCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHEEEEEECCCCCCCCCCEEEEH VQFGNQVQLIDAEKIETGGFTNFGEAAAGLIRGANIGYSPDEGEFTIRIDGGTDRDTLLL HHCCCEEEEEECCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEE VDGVPYFDRSSPSEDLWPATAIDPRMIDSVEVYRGGQSLYFGSNGGLGVVSVKTKEPDGT ECCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCEEEEECCCCEEEEEEEECCCCCC KKGQIGVYGGSFKTREIYGNVSMPIDAEGKHSFLVYGRSYHSDAHELFDVSAFGDNVLAL CCCEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHEEEECCCCCEEEE GGFQPYPYDFNSLGAKYLWQIDATSELRLGASFSTIDFHDSFPNSTVFAQNFTEFPIYTA CCCCCCCCCHHCCCCEEEEEECCCCCEEECCCEEEEECCCCCCCCEEEECCCCCCCEEEC NYEKSFSDNFRIEVDSHWQKPQLKNHEVLARVCRTPRLQDLPENVRALASEQGITDFASA CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHH AQFEAFAATVPNLSAGCVTNPYGTTGGAATSAQNGWMVNQDPNSPYFGQAYGTVQNPFPI HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC GAPIGYMVETTTSFGDNTPVKGFGSTDNRRSGYIDYGINARGTYRLNDLVEVVGGLQYTA CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHCCCEEEE YEDASDDSFGVKDTKVTTTGVYGDLRLSLPVLEGLNGSFAIRQDFNDGFDDQMIYKVGLR ECCCCCCCCCCCCCEEEEEEEEEEEEEEEHHHHCCCCCEEEEECCCCCCCCCEEEEECCC QNLPAGFYARASGGTSYSAPKIDEIGAYGANQNLNPGLEPQSVEALNAGFGMDGTFGDAT CCCCCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEE FNIELGYFQTDIENLFGTRSVESVCLQYEGNPFDLDIINRNRENIVPPDAFCSTAASSGL EEEEECEEHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHCCC DGAEVVAVNTRAIQEIEGFTVDLAFDYGAFSGDLSYTMMDSLEPNPVFGLPARLDGTTTD CCCEEEEEEHHHHHHHCCEEEEEEEECCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCC LDFVTPGAAGSDEKRQSGERPEWTLSALLTYKPTEQWIFALNPRLQGAEWAHAPTTAARL CEEECCCCCCCCHHHHCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEE VDADGNRVVDDVNFGDYFVLNGSIQYFFGEDRQHRILIRGVNLLDEGYYERYSGGASLTL EECCCCEEEEECCCCCEEEECCEEEEEECCCCCCEEEEEECCHHHCCHHHHHCCCCEEEE DRAVVRGEIGVNDSAYYRQYGWNGKPRSAWVQYEYRF EEEEEECCCCCCCCHHHHHCCCCCCCCCEEEEEEEEC >Mature Secondary Structure MIYDLRKKLLWSVGAVLVSASFAAPVMAQTEAAEEDEARLSTVLVEGRRVDEATPLAIDM CCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHEEEEEECCCCCCCCCCEEEEH VQFGNQVQLIDAEKIETGGFTNFGEAAAGLIRGANIGYSPDEGEFTIRIDGGTDRDTLLL HHCCCEEEEEECCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEE VDGVPYFDRSSPSEDLWPATAIDPRMIDSVEVYRGGQSLYFGSNGGLGVVSVKTKEPDGT ECCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCEEEEECCCCEEEEEEEECCCCCC KKGQIGVYGGSFKTREIYGNVSMPIDAEGKHSFLVYGRSYHSDAHELFDVSAFGDNVLAL CCCEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHEEEECCCCCEEEE GGFQPYPYDFNSLGAKYLWQIDATSELRLGASFSTIDFHDSFPNSTVFAQNFTEFPIYTA CCCCCCCCCHHCCCCEEEEEECCCCCEEECCCEEEEECCCCCCCCEEEECCCCCCCEEEC NYEKSFSDNFRIEVDSHWQKPQLKNHEVLARVCRTPRLQDLPENVRALASEQGITDFASA CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHH AQFEAFAATVPNLSAGCVTNPYGTTGGAATSAQNGWMVNQDPNSPYFGQAYGTVQNPFPI HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC GAPIGYMVETTTSFGDNTPVKGFGSTDNRRSGYIDYGINARGTYRLNDLVEVVGGLQYTA CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHCCCEEEE YEDASDDSFGVKDTKVTTTGVYGDLRLSLPVLEGLNGSFAIRQDFNDGFDDQMIYKVGLR ECCCCCCCCCCCCCEEEEEEEEEEEEEEEHHHHCCCCCEEEEECCCCCCCCCEEEEECCC QNLPAGFYARASGGTSYSAPKIDEIGAYGANQNLNPGLEPQSVEALNAGFGMDGTFGDAT CCCCCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEE FNIELGYFQTDIENLFGTRSVESVCLQYEGNPFDLDIINRNRENIVPPDAFCSTAASSGL EEEEECEEHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHCCC DGAEVVAVNTRAIQEIEGFTVDLAFDYGAFSGDLSYTMMDSLEPNPVFGLPARLDGTTTD CCCEEEEEEHHHHHHHCCEEEEEEEECCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCC LDFVTPGAAGSDEKRQSGERPEWTLSALLTYKPTEQWIFALNPRLQGAEWAHAPTTAARL CEEECCCCCCCCHHHHCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEE VDADGNRVVDDVNFGDYFVLNGSIQYFFGEDRQHRILIRGVNLLDEGYYERYSGGASLTL EECCCCEEEEECCCCCEEEECCEEEEEECCCCCCEEEEEECCHHHCCHHHHHCCCCEEEE DRAVVRGEIGVNDSAYYRQYGWNGKPRSAWVQYEYRF EEEEEECCCCCCCCHHHHHCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA