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The map label for this gene is yajC [H]

Identifier: 114797763

GI number: 114797763

Start: 1997852

End: 1998226

Strand: Reverse

Name: yajC [H]

Synonym: HNE_1927

Alternate gene names: 114797763

Gene position: 1998226-1997852 (Counterclockwise)

Preceding gene: 114800134

Following gene: 114798563

Centisome position: 53.93

GC content: 61.33

Gene sequence:

>375_bases
ATGTCCGCCCGTTTTCTGACACTTGCCCTCATCTCCACGGCGATGGCCCTGCCGGCCGCAGCGCAGGCTGCGCCGGCTGC
TGCGCCTGGCGGCGGCCTCATGATGCAGCTGGTGATGTTCCTCCCGCTCATCCTGATCTTCTACTTCCTTCTGATCCGCC
CGCAGCAGCAGCGCGCCAAGAAGCACACCGCCATGATCAGCGCCATCAAGCGCGGCGACACGGTCGTCACCTCGGGCGGC
CTGATCGGCAAGGTGAACAAGGTCAGCGACACAGAGATCTCTGTTGATCTTGCTGAAAACGTTCGCGTTCGCGTCATCAA
GTCGATGGTGATCGAAGTTCGCAACAAGGCTGAACCGGTTCCAGCGAACGACTGA

Upstream 100 bases:

>100_bases
GGGGGAATCGCCTGCAGGGGTAGTTTGCCAAGGCGCAGCCGCGCCGCTATACGCCTCAAGTTCCCTGTTACCGCCGCAGA
ATTTTCTGGAGAATGCCGAC

Downstream 100 bases:

>100_bases
CCTTCTGGCCCTCGGCCAAAGCTATAGGAAAGCGCAATGCTTCAGTTCCCTGCGTGGAAAGTACTGCTTGTATTAGGGGT
GCTCGTGTGGGGCGTCGTGA

Product: preprotein translocase, YajC subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSARFLTLALISTAMALPAAAQAAPAAAPGGGLMMQLVMFLPLILIFYFLLIRPQQQRAKKHTAMISAIKRGDTVVTSGG
LIGKVNKVSDTEISVDLAENVRVRVIKSMVIEVRNKAEPVPAND

Sequences:

>Translated_124_residues
MSARFLTLALISTAMALPAAAQAAPAAAPGGGLMMQLVMFLPLILIFYFLLIRPQQQRAKKHTAMISAIKRGDTVVTSGG
LIGKVNKVSDTEISVDLAENVRVRVIKSMVIEVRNKAEPVPAND
>Mature_123_residues
SARFLTLALISTAMALPAAAQAAPAAAPGGGLMMQLVMFLPLILIFYFLLIRPQQQRAKKHTAMISAIKRGDTVVTSGGL
IGKVNKVSDTEISVDLAENVRVRVIKSMVIEVRNKAEPVPAND

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=95, Percent_Identity=40, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 13257; Mature: 13126

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARFLTLALISTAMALPAAAQAAPAAAPGGGLMMQLVMFLPLILIFYFLLIRPQQQRAK
CCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
KHTAMISAIKRGDTVVTSGGLIGKVNKVSDTEISVDLAENVRVRVIKSMVIEVRNKAEPV
HHHHHHHHHHCCCEEEECCCCEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCC
PAND
CCCC
>Mature Secondary Structure 
SARFLTLALISTAMALPAAAQAAPAAAPGGGLMMQLVMFLPLILIFYFLLIRPQQQRAK
CCHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
KHTAMISAIKRGDTVVTSGGLIGKVNKVSDTEISVDLAENVRVRVIKSMVIEVRNKAEPV
HHHHHHHHHHCCCEEEECCCCEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCC
PAND
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]