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The map label for this gene is secY [H]

Identifier: 114797687

GI number: 114797687

Start: 2993140

End: 2994495

Strand: Reverse

Name: secY [H]

Synonym: HNE_2831

Alternate gene names: 114797687

Gene position: 2994495-2993140 (Counterclockwise)

Preceding gene: 114797152

Following gene: 114797627

Centisome position: 80.82

GC content: 58.92

Gene sequence:

>1356_bases
ATGGCGAATGCTGCGGAACAAATGGCTCGCAACCTCAACTTTGCGACCTTTGCGAAAGCCAAAGACCTTCAGGCGCGTAT
CCTTTTCACGCTCGGTATTCTGGTTCTCTACCGGCTAGGGACGTTCATCCCGATCCCCGGCCTGGACCCCTCGCAATACG
CAGCGTTGTTCGAAAGCCAGTCGAGCGGCATTCTCGGCTCGATGAACATGTTCGCCGGCGGCGCTGTCGAGCGGATGGGC
GTGTTCGCGCTGAACGTCATGCCCTACATCACGGCGTCAATCATCATCCAGATGATGACCTCCGTTTCGCCTTCGCTTGA
GAAGCTCAAGAAAGAAGGGGAGGCGGGCCGCAAGCAGATCAACCAGTATACGCGCTATCTGACCCTCGGCTTCGCCCTGG
TTCAGGCCTTTGCCATCGCTGGCGGCCTTGTTGCCGTGCGGCTTGAAGGCATCTCGTCCTGGTTCTTCATCCTCACCGGC
GTCGTCACGCTGACCGGCGGCACTATGCTGCTGATGTGGATGGGTGAGCAGATCACCGCCCGCGGTATCGGTAACGGCAT
CTCGCTGATCATCTTTGCCGGCATTATTGCCGAAATGCCTCGCGCCATCTTCAACCTGGTTGCCCAGGCCCGCACCACCT
CGGTGGACATCGGCTTCATCCTGGCCATCGTGGTGATGGTGATCGCGCTGGTCGTGTTCATCGTGTTTATCGAGCGCTCG
CAGCGTCGCCTGATCATCCACTATCCCAAGCGCCAGCAGGCGCAGGGCTTTGCCCAGGGCCAGAAAAGCTTCCTGCCGCT
GAAGATCAACACCTCGGGCGTTATCCCGGCGATCTTCGCGACAGCGCTCCTGATGCTCCCGCTGACGGCCGTTGGCTTCC
TGGGTGGCAATGCCGCCGATACCGAAGCGACCGGCATGACGGGCGTTCTGGGCTGGCTGGCGACCAACTTCGCGCCGGGC
TCGTGGACCTACATCGTGACCTACGCCGTGCTGGTGGCGTTCTTTGCCTTCTTCTACACGTCGATCATGTTCAATCCGCA
GGAAACGGCGGACAATCTGCGCAAGTATGGCGGCTTCATTCCGGGCATCCGTCCGGGCTCCAATACGGCCGCCTATATCG
ACTATGTGCTGACCCGCCTGACTACCATTGGTGCCCTCTACCTGGTCTTCATCTGCATCCTGCCTGAGCTCCTGCGGCGA
TATTTCCCTCAAATTCCGTTTTACATTGGGGGCACGTCTCTGCTCATTGTTGTTTCGGTGACTATGGACACTGTCACGCA
GATCCAGTCACACCTGATCGCCCACCAGTATGAGGGGATGATCAAGAAGTCGAAACTCGGGGGCAAGAAGAAGTGA

Upstream 100 bases:

>100_bases
CTGAGGAATAATCAGGGGTTCTTGCTAAACCCCTCTTCACAAATCCTGTGTCGCCGCCGATCTTGGCGGCGAACGCTTTT
CAGGGAGGCTCGTGCGGCCG

Downstream 100 bases:

>100_bases
ACCTGATACTGTTTGGTCCGCCGGCTGCGGGCAAGGGCACGCAGGCCAAGCGACTCGTTGAGCAGCGTGGCTTTGTGCAA
CTTTCCACCGGCGACATGCT

Product: preprotein translocase, SecY subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MANAAEQMARNLNFATFAKAKDLQARILFTLGILVLYRLGTFIPIPGLDPSQYAALFESQSSGILGSMNMFAGGAVERMG
VFALNVMPYITASIIIQMMTSVSPSLEKLKKEGEAGRKQINQYTRYLTLGFALVQAFAIAGGLVAVRLEGISSWFFILTG
VVTLTGGTMLLMWMGEQITARGIGNGISLIIFAGIIAEMPRAIFNLVAQARTTSVDIGFILAIVVMVIALVVFIVFIERS
QRRLIIHYPKRQQAQGFAQGQKSFLPLKINTSGVIPAIFATALLMLPLTAVGFLGGNAADTEATGMTGVLGWLATNFAPG
SWTYIVTYAVLVAFFAFFYTSIMFNPQETADNLRKYGGFIPGIRPGSNTAAYIDYVLTRLTTIGALYLVFICILPELLRR
YFPQIPFYIGGTSLLIVVSVTMDTVTQIQSHLIAHQYEGMIKKSKLGGKKK

Sequences:

>Translated_451_residues
MANAAEQMARNLNFATFAKAKDLQARILFTLGILVLYRLGTFIPIPGLDPSQYAALFESQSSGILGSMNMFAGGAVERMG
VFALNVMPYITASIIIQMMTSVSPSLEKLKKEGEAGRKQINQYTRYLTLGFALVQAFAIAGGLVAVRLEGISSWFFILTG
VVTLTGGTMLLMWMGEQITARGIGNGISLIIFAGIIAEMPRAIFNLVAQARTTSVDIGFILAIVVMVIALVVFIVFIERS
QRRLIIHYPKRQQAQGFAQGQKSFLPLKINTSGVIPAIFATALLMLPLTAVGFLGGNAADTEATGMTGVLGWLATNFAPG
SWTYIVTYAVLVAFFAFFYTSIMFNPQETADNLRKYGGFIPGIRPGSNTAAYIDYVLTRLTTIGALYLVFICILPELLRR
YFPQIPFYIGGTSLLIVVSVTMDTVTQIQSHLIAHQYEGMIKKSKLGGKKK
>Mature_450_residues
ANAAEQMARNLNFATFAKAKDLQARILFTLGILVLYRLGTFIPIPGLDPSQYAALFESQSSGILGSMNMFAGGAVERMGV
FALNVMPYITASIIIQMMTSVSPSLEKLKKEGEAGRKQINQYTRYLTLGFALVQAFAIAGGLVAVRLEGISSWFFILTGV
VTLTGGTMLLMWMGEQITARGIGNGISLIIFAGIIAEMPRAIFNLVAQARTTSVDIGFILAIVVMVIALVVFIVFIERSQ
RRLIIHYPKRQQAQGFAQGQKSFLPLKINTSGVIPAIFATALLMLPLTAVGFLGGNAADTEATGMTGVLGWLATNFAPGS
WTYIVTYAVLVAFFAFFYTSIMFNPQETADNLRKYGGFIPGIRPGSNTAAYIDYVLTRLTTIGALYLVFICILPELLRRY
FPQIPFYIGGTSLLIVVSVTMDTVTQIQSHLIAHQYEGMIKKSKLGGKKK

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=434, Percent_Identity=49.7695852534562, Blast_Score=384, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 49094; Mature: 48963

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANAAEQMARNLNFATFAKAKDLQARILFTLGILVLYRLGTFIPIPGLDPSQYAALFESQ
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
SSGILGSMNMFAGGAVERMGVFALNVMPYITASIIIQMMTSVSPSLEKLKKEGEAGRKQI
CCCCEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NQYTRYLTLGFALVQAFAIAGGLVAVRLEGISSWFFILTGVVTLTGGTMLLMWMGEQITA
HHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
RGIGNGISLIIFAGIIAEMPRAIFNLVAQARTTSVDIGFILAIVVMVIALVVFIVFIERS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
QRRLIIHYPKRQQAQGFAQGQKSFLPLKINTSGVIPAIFATALLMLPLTAVGFLGGNAAD
CCEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
TEATGMTGVLGWLATNFAPGSWTYIVTYAVLVAFFAFFYTSIMFNPQETADNLRKYGGFI
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
PGIRPGSNTAAYIDYVLTRLTTIGALYLVFICILPELLRRYFPQIPFYIGGTSLLIVVSV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEEH
TMDTVTQIQSHLIAHQYEGMIKKSKLGGKKK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ANAAEQMARNLNFATFAKAKDLQARILFTLGILVLYRLGTFIPIPGLDPSQYAALFESQ
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
SSGILGSMNMFAGGAVERMGVFALNVMPYITASIIIQMMTSVSPSLEKLKKEGEAGRKQI
CCCCEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NQYTRYLTLGFALVQAFAIAGGLVAVRLEGISSWFFILTGVVTLTGGTMLLMWMGEQITA
HHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
RGIGNGISLIIFAGIIAEMPRAIFNLVAQARTTSVDIGFILAIVVMVIALVVFIVFIERS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
QRRLIIHYPKRQQAQGFAQGQKSFLPLKINTSGVIPAIFATALLMLPLTAVGFLGGNAAD
CCEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
TEATGMTGVLGWLATNFAPGSWTYIVTYAVLVAFFAFFYTSIMFNPQETADNLRKYGGFI
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
PGIRPGSNTAAYIDYVLTRLTTIGALYLVFICILPELLRRYFPQIPFYIGGTSLLIVVSV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEEH
TMDTVTQIQSHLIAHQYEGMIKKSKLGGKKK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]