Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797661

Identifier: 114797661

GI number: 114797661

Start: 2025065

End: 2025889

Strand: Reverse

Name: 114797661

Synonym: HNE_1955

Alternate gene names: NA

Gene position: 2025889-2025065 (Counterclockwise)

Preceding gene: 114798436

Following gene: 114797734

Centisome position: 54.68

GC content: 57.7

Gene sequence:

>825_bases
TTGGCCATTCCGTCCATAGCAGCAGTTCGCAAGACCCTCATCGCGCGGCCGGGCAAGCCATTCGAGATCAAGGATCGGCC
GACCGCCGATCGCGAGTTGTTTGACGACAAGGAAGAGGCCAAGACCAGCCTCAAGAAGGATGCGGCCTGCATCAATGACC
TGAAAGACAAGCTTTATGCCGAGGGCAAGCGCGCGCTGCTTGTTGTGTTGCAAGGTATGGATACGGCGGGGAAGTCGGGC
ACCATCAAATCTGTTTTCGCTGACACAACGCCGCTCGGCATGGAAGTGAAGGCATTCAAGGCGCCGAGCAGTGAGGAAAT
GGCGCGCGACTATCTTTGGCGCGTTCACAACGCAGTGCCCCGGCGGGGGCATGTCGGCATTTTCGACCGGTCACATTATG
AGGATGTGCTGGTGGCGAAAGTGCGTGGCTTTGCCCCGGCAGACGCCATTGAGCAGCGTTACAGCCAGATCAACGCGTTT
GAGAAGCACCTCTCGGAGAACGGCTACACGATCGTCAAATGCATGCTGAACATCGGCTATGAGGAACAGGGTATCCGCCT
CAAGGAGCGCCTGGTTGAGCCGCACAAGCTGTGGAAGTTTAATCCGGGCGATCTTGATGATCGTTCGCTCTGGCCACAAT
TCATGCAGGCCTATGAGACCGCTGTTACACGGTGCTCCACCAAGCATTCCCCCTGGTACGTCATTCCCGCTGACAGCAGA
ACGCGCCGCAATGCGATGATTGCGCGTCTCGTGCGAGGCGCGCTGGAGGACATGGACCTCAAATGGAAAGACCCCGGACT
TGATCCGGGGTCCTACGAGATTTGA

Upstream 100 bases:

>100_bases
GGTGGTCGAGTTCTACTCCTCGTAAGAGACCTGTTTTTCTTGTACTTTCGGGAAGGCCGCGCCAGACTGGTGCGGCCTTT
TCATTTTCGGGGAGATCTCC

Downstream 100 bases:

>100_bases
AAGTACAATCAGACGCGTGATGTTCAGTTGAACGACACGTCTCCGCCGCTGGACTCTCTGGCCTCCTTTTGCGCCGGCGC
GCCATCAAAGGAGACGTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: URF2 [H]

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MAIPSIAAVRKTLIARPGKPFEIKDRPTADRELFDDKEEAKTSLKKDAACINDLKDKLYAEGKRALLVVLQGMDTAGKSG
TIKSVFADTTPLGMEVKAFKAPSSEEMARDYLWRVHNAVPRRGHVGIFDRSHYEDVLVAKVRGFAPADAIEQRYSQINAF
EKHLSENGYTIVKCMLNIGYEEQGIRLKERLVEPHKLWKFNPGDLDDRSLWPQFMQAYETAVTRCSTKHSPWYVIPADSR
TRRNAMIARLVRGALEDMDLKWKDPGLDPGSYEI

Sequences:

>Translated_274_residues
MAIPSIAAVRKTLIARPGKPFEIKDRPTADRELFDDKEEAKTSLKKDAACINDLKDKLYAEGKRALLVVLQGMDTAGKSG
TIKSVFADTTPLGMEVKAFKAPSSEEMARDYLWRVHNAVPRRGHVGIFDRSHYEDVLVAKVRGFAPADAIEQRYSQINAF
EKHLSENGYTIVKCMLNIGYEEQGIRLKERLVEPHKLWKFNPGDLDDRSLWPQFMQAYETAVTRCSTKHSPWYVIPADSR
TRRNAMIARLVRGALEDMDLKWKDPGLDPGSYEI
>Mature_273_residues
AIPSIAAVRKTLIARPGKPFEIKDRPTADRELFDDKEEAKTSLKKDAACINDLKDKLYAEGKRALLVVLQGMDTAGKSGT
IKSVFADTTPLGMEVKAFKAPSSEEMARDYLWRVHNAVPRRGHVGIFDRSHYEDVLVAKVRGFAPADAIEQRYSQINAFE
KHLSENGYTIVKCMLNIGYEEQGIRLKERLVEPHKLWKFNPGDLDDRSLWPQFMQAYETAVTRCSTKHSPWYVIPADSRT
RRNAMIARLVRGALEDMDLKWKDPGLDPGSYEI

Specific function: Unknown

COG id: COG2326

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011993
- InterPro:   IPR022488 [H]

Pfam domain/function: PF03976 PPK2 [H]

EC number: NA

Molecular weight: Translated: 31084; Mature: 30953

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPSIAAVRKTLIARPGKPFEIKDRPTADRELFDDKEEAKTSLKKDAACINDLKDKLYA
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
EGKRALLVVLQGMDTAGKSGTIKSVFADTTPLGMEVKAFKAPSSEEMARDYLWRVHNAVP
CCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCC
RRGHVGIFDRSHYEDVLVAKVRGFAPADAIEQRYSQINAFEKHLSENGYTIVKCMLNIGY
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCC
EEQGIRLKERLVEPHKLWKFNPGDLDDRSLWPQFMQAYETAVTRCSTKHSPWYVIPADSR
CCCCCHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
TRRNAMIARLVRGALEDMDLKWKDPGLDPGSYEI
HHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
AIPSIAAVRKTLIARPGKPFEIKDRPTADRELFDDKEEAKTSLKKDAACINDLKDKLYA
CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
EGKRALLVVLQGMDTAGKSGTIKSVFADTTPLGMEVKAFKAPSSEEMARDYLWRVHNAVP
CCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCC
RRGHVGIFDRSHYEDVLVAKVRGFAPADAIEQRYSQINAFEKHLSENGYTIVKCMLNIGY
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCC
EEQGIRLKERLVEPHKLWKFNPGDLDDRSLWPQFMQAYETAVTRCSTKHSPWYVIPADSR
CCCCCHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
TRRNAMIARLVRGALEDMDLKWKDPGLDPGSYEI
HHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8199775 [H]