Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797532

Identifier: 114797532

GI number: 114797532

Start: 3574054

End: 3574632

Strand: Direct

Name: 114797532

Synonym: HNE_3434

Alternate gene names: NA

Gene position: 3574054-3574632 (Clockwise)

Preceding gene: 114800369

Following gene: 114800283

Centisome position: 96.47

GC content: 68.57

Gene sequence:

>579_bases
ATGAAACGGGCACCCCTCGTTCTGGCCATCCTCCTTACCCTCTCGACGGGCGCAGGCGCCGAGCCAACTGTCAGGCCCGC
CGCATTGCCTGTTGCCGAGCCCGCGGCCGCGCCGGGCCCCCAGCCGGTGATCAGCCGGTTTTCCAAAAAGCCCGTCCCGC
GCTTTGAAACCCTGCGCTGGGCCGAAGTGAACGGGCGCACCGGCCCCAGCCTCTCCTCCCCTATCGCCTGGCAGTATAAC
CGCAAGGGACTGCCCGTGATGGTCGTCAAGGAAAGCGGGGAATGGTACCGCGTGCGCGATCCGGCCGGCGACGAGGTATG
GATACATATGCGCATGCTGGCCGAGGGGACGACCGCCATGGTCACGCGCACCGCCGTGCTCGCCAGCAGCCCGGACCGGA
GCGGAGAGGGTGTCGCTGAACTCGGCAAGGGCGTCCTGGTCGAAGTGACGGCCTGTGAGGCCGCGCTCTGTGAGGTCGAA
GCGGCCGGGTATCGCGGCTGGATGCCCCGCGCCAGCCTGTGGGGCGCCAGCACCGGCCCGGCCGGCAAACCAGCCCCTCA
ATCAGGCACAAATGGTTGA

Upstream 100 bases:

>100_bases
TTAGCAGAGCCAACCCGTCACGCCAATCTCCCACAGCTTTACTGTGGATTCATGGTGTGGTGCCAGAATGCCCCTTCCCC
TCCTGATGGAAGCTTTGCAC

Downstream 100 bases:

>100_bases
CAAGGCGCGGGGCGTCGGCTCGAAGGCGTGATCCAAACTGAATGAGGACACCCCGACATGCAGGGTCCGCACGACTTTCA
CACGCCCAAATCCTCCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKRAPLVLAILLTLSTGAGAEPTVRPAALPVAEPAAAPGPQPVISRFSKKPVPRFETLRWAEVNGRTGPSLSSPIAWQYN
RKGLPVMVVKESGEWYRVRDPAGDEVWIHMRMLAEGTTAMVTRTAVLASSPDRSGEGVAELGKGVLVEVTACEAALCEVE
AAGYRGWMPRASLWGASTGPAGKPAPQSGTNG

Sequences:

>Translated_192_residues
MKRAPLVLAILLTLSTGAGAEPTVRPAALPVAEPAAAPGPQPVISRFSKKPVPRFETLRWAEVNGRTGPSLSSPIAWQYN
RKGLPVMVVKESGEWYRVRDPAGDEVWIHMRMLAEGTTAMVTRTAVLASSPDRSGEGVAELGKGVLVEVTACEAALCEVE
AAGYRGWMPRASLWGASTGPAGKPAPQSGTNG
>Mature_192_residues
MKRAPLVLAILLTLSTGAGAEPTVRPAALPVAEPAAAPGPQPVISRFSKKPVPRFETLRWAEVNGRTGPSLSSPIAWQYN
RKGLPVMVVKESGEWYRVRDPAGDEVWIHMRMLAEGTTAMVTRTAVLASSPDRSGEGVAELGKGVLVEVTACEAALCEVE
AAGYRGWMPRASLWGASTGPAGKPAPQSGTNG

Specific function: Unknown

COG id: COG3807

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20198; Mature: 20198

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAPLVLAILLTLSTGAGAEPTVRPAALPVAEPAAAPGPQPVISRFSKKPVPRFETLRW
CCCCHHHHHEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHCEEE
AEVNGRTGPSLSSPIAWQYNRKGLPVMVVKESGEWYRVRDPAGDEVWIHMRMLAEGTTAM
EECCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEEEECCCCHHH
VTRTAVLASSPDRSGEGVAELGKGVLVEVTACEAALCEVEAAGYRGWMPRASLWGASTGP
HHHHHHEECCCCCCCCCHHHHCCCEEEEEECHHHHHHHHHCCCCCCCCCCCHHCCCCCCC
AGKPAPQSGTNG
CCCCCCCCCCCC
>Mature Secondary Structure
MKRAPLVLAILLTLSTGAGAEPTVRPAALPVAEPAAAPGPQPVISRFSKKPVPRFETLRW
CCCCHHHHHEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHCEEE
AEVNGRTGPSLSSPIAWQYNRKGLPVMVVKESGEWYRVRDPAGDEVWIHMRMLAEGTTAM
EECCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEEEECCCCHHH
VTRTAVLASSPDRSGEGVAELGKGVLVEVTACEAALCEVEAAGYRGWMPRASLWGASTGP
HHHHHHEECCCCCCCCCHHHHCCCEEEEEECHHHHHHHHHCCCCCCCCCCCHHCCCCCCC
AGKPAPQSGTNG
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA