Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797518

Identifier: 114797518

GI number: 114797518

Start: 2742745

End: 2744256

Strand: Reverse

Name: 114797518

Synonym: HNE_2587

Alternate gene names: NA

Gene position: 2744256-2742745 (Counterclockwise)

Preceding gene: 114800108

Following gene: 114799569

Centisome position: 74.07

GC content: 60.91

Gene sequence:

>1512_bases
ATGCGTATGATGTCTCGAATCTGCACCCGTCTGCCCGCCGCCGCGATGGCCACCTTGATTGCAGCCTGCGCCTCTTCGGC
AGAGCCTGCAGCGCCTGTCTGGACAGTATTTGCCGATGGGCCAGCGCAGAGCGTGCAGGACCGCTTTGGCGAGGCGCCGC
TCGCCTATTCGGTTGCCTGGAGCGAGTTGAAACTTGATCCGGAGCAGGGAGAAACAAGCGCGACCATTTCCGGAACGGCC
TATCTGGTTGCCTGCGACTGTGACCGGACAGAGCGGCCCGTGATGTTCCTGTTCAATGGGGGGCCGGGCGCTTCGTCATC
TCCCTTGCATTTTTCCATGGGGCCCAAGGCGCGCGGAAAAGAGGGCGAGTTTCCAGATAATCCGTACACCGTTCTAAGGG
CCGCAGATCTCGTCTTCATCGATCCGGTGGACACCGGCTTCAGCCGGACCCATTCCGAGGACGGGAAGGCGCGCTACCTT
GGTGTTGAAGGAGATGTCGACGCCGTAAATCGATACATCCGCGCCTGGCTCGACGGGAACGGCCGCCGCGCGGCGCCCGT
TCTTCTGGCGGGGCAGAGCTATGGCGGGACCCGGCTTTCCAATCTCGTCGCCGAGGTAGACGATCTGGATGTGCGCGGCC
TGGTGATGGTGTCGCCGGCGCTTGATAGCGGGGCGGGCCAGACCGATCTGGGGCATGTGTTCGCGCTGCCGACAATGGCG
GCCACCGCATGGCGATTTGGCCGGTCGGGAATTGAGGCTGAGAGTGAGGCAGAGGCCTGGGACATCGCAAGGGAATATGC
CGAGACCGGATATCTGCTGGCGTTGCAACAGGGTGACCTTATCGCGCCAGAAGAGAAGGCTGCGGTTGCCGCAGACATAG
CGTCGATGACGGGGCTTTCGGCCGGGGATGTGCTTGGCGCCGATCTGCGCGTTGATATCCAGTTCTTTCTGGAGAATGTG
CTTTCGACTGACGGCCTGCTCGTCAGCCGGCTGAATACCGGCGTGACTTCTCCGCTGCCTTCACCGGACGTCAATTCGCA
CCGGCCCGCCGCCGCAAACGACCCATCGTTGGGTCTTGGTCGGTCGAACATCATTCTGTCGTCAGAGATCGCGAAATATC
TTTCAGAGGTTACCGGCGTTCAGAGAGGCGAGGCGTATCGCTCTCTCAATCTGGATGCCAACTTTGCTTGGGACTGGCGG
TCCTCGGCGAAATCGCCGAACTTCTATGTCAGCGCGGCGCCCGTCCTCTCGCAGTTCATGCAGGAGAAAGAGCGCGTCCG
GCTGCTCGTATTCGCCGGTTATCGCGACCTCGCGACGACGCTGCTCGGAACACGCTATGCGTTGACCCACAATGATCTGC
CCCAGGACCGGGTAACGCTCGCCGCGTTGCCGGGTGGCCATTCGCCTTATGATGAGGAAACGCTGAAAGCGGGTATGGCG
GATCAACTTTTTGCCTTCATTCAATCTGCCGCAATGACGGCATCTTCAAATGCTCAGGAGTCTGCAGAATGA

Upstream 100 bases:

>100_bases
ATGCATTCCTCGGCGCGATTATGCATGAATGTGCCCGTTGGGGTGTATCGGCGCAGCCTATAGGCATAGGATTTTTCCGG
TACAGGGGCGAGTTTAAAGG

Downstream 100 bases:

>100_bases
CCTTTCGCGCTTTTGCAACATGCGCTGCTGCCTTGTTCATTTCCGCCTTTCCGGCGGCCTCTGGTCAAGGCGCTGAATAT
GAGTATGCCATCATCCAGAA

Product: serine carboxypeptidase family protein

Products: NA

Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; S10 Family Peptidase; Serine-Type Carboxypeptidase Family Protein; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MRMMSRICTRLPAAAMATLIAACASSAEPAAPVWTVFADGPAQSVQDRFGEAPLAYSVAWSELKLDPEQGETSATISGTA
YLVACDCDRTERPVMFLFNGGPGASSSPLHFSMGPKARGKEGEFPDNPYTVLRAADLVFIDPVDTGFSRTHSEDGKARYL
GVEGDVDAVNRYIRAWLDGNGRRAAPVLLAGQSYGGTRLSNLVAEVDDLDVRGLVMVSPALDSGAGQTDLGHVFALPTMA
ATAWRFGRSGIEAESEAEAWDIAREYAETGYLLALQQGDLIAPEEKAAVAADIASMTGLSAGDVLGADLRVDIQFFLENV
LSTDGLLVSRLNTGVTSPLPSPDVNSHRPAAANDPSLGLGRSNIILSSEIAKYLSEVTGVQRGEAYRSLNLDANFAWDWR
SSAKSPNFYVSAAPVLSQFMQEKERVRLLVFAGYRDLATTLLGTRYALTHNDLPQDRVTLAALPGGHSPYDEETLKAGMA
DQLFAFIQSAAMTASSNAQESAE

Sequences:

>Translated_503_residues
MRMMSRICTRLPAAAMATLIAACASSAEPAAPVWTVFADGPAQSVQDRFGEAPLAYSVAWSELKLDPEQGETSATISGTA
YLVACDCDRTERPVMFLFNGGPGASSSPLHFSMGPKARGKEGEFPDNPYTVLRAADLVFIDPVDTGFSRTHSEDGKARYL
GVEGDVDAVNRYIRAWLDGNGRRAAPVLLAGQSYGGTRLSNLVAEVDDLDVRGLVMVSPALDSGAGQTDLGHVFALPTMA
ATAWRFGRSGIEAESEAEAWDIAREYAETGYLLALQQGDLIAPEEKAAVAADIASMTGLSAGDVLGADLRVDIQFFLENV
LSTDGLLVSRLNTGVTSPLPSPDVNSHRPAAANDPSLGLGRSNIILSSEIAKYLSEVTGVQRGEAYRSLNLDANFAWDWR
SSAKSPNFYVSAAPVLSQFMQEKERVRLLVFAGYRDLATTLLGTRYALTHNDLPQDRVTLAALPGGHSPYDEETLKAGMA
DQLFAFIQSAAMTASSNAQESAE
>Mature_503_residues
MRMMSRICTRLPAAAMATLIAACASSAEPAAPVWTVFADGPAQSVQDRFGEAPLAYSVAWSELKLDPEQGETSATISGTA
YLVACDCDRTERPVMFLFNGGPGASSSPLHFSMGPKARGKEGEFPDNPYTVLRAADLVFIDPVDTGFSRTHSEDGKARYL
GVEGDVDAVNRYIRAWLDGNGRRAAPVLLAGQSYGGTRLSNLVAEVDDLDVRGLVMVSPALDSGAGQTDLGHVFALPTMA
ATAWRFGRSGIEAESEAEAWDIAREYAETGYLLALQQGDLIAPEEKAAVAADIASMTGLSAGDVLGADLRVDIQFFLENV
LSTDGLLVSRLNTGVTSPLPSPDVNSHRPAAANDPSLGLGRSNIILSSEIAKYLSEVTGVQRGEAYRSLNLDANFAWDWR
SSAKSPNFYVSAAPVLSQFMQEKERVRLLVFAGYRDLATTLLGTRYALTHNDLPQDRVTLAALPGGHSPYDEETLKAGMA
DQLFAFIQSAAMTASSNAQESAE

Specific function: Unknown

COG id: COG2939

COG function: function code E; Carboxypeptidase C (cathepsin A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53645; Mature: 53645

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMMSRICTRLPAAAMATLIAACASSAEPAAPVWTVFADGPAQSVQDRFGEAPLAYSVAW
CCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEH
SELKLDPEQGETSATISGTAYLVACDCDRTERPVMFLFNGGPGASSSPLHFSMGPKARGK
HHEEECCCCCCCCEEECCEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCC
EGEFPDNPYTVLRAADLVFIDPVDTGFSRTHSEDGKARYLGVEGDVDAVNRYIRAWLDGN
CCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCC
GRRAAPVLLAGQSYGGTRLSNLVAEVDDLDVRGLVMVSPALDSGAGQTDLGHVFALPTMA
CCEECEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEHHHHH
ATAWRFGRSGIEAESEAEAWDIAREYAETGYLLALQQGDLIAPEEKAAVAADIASMTGLS
HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCC
AGDVLGADLRVDIQFFLENVLSTDGLLVSRLNTGVTSPLPSPDVNSHRPAAANDPSLGLG
CCCEECCCCEEHHHHHHHHHHCCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RSNIILSSEIAKYLSEVTGVQRGEAYRSLNLDANFAWDWRSSAKSPNFYVSAAPVLSQFM
CCCEEEHHHHHHHHHHHHCCCCCCHHEEECCCCCEEECHHCCCCCCCEEEEHHHHHHHHH
QEKERVRLLVFAGYRDLATTLLGTRYALTHNDLPQDRVTLAALPGGHSPYDEETLKAGMA
HHHHHEEEEEEECCHHHHHHHHHCEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHCCHH
DQLFAFIQSAAMTASSNAQESAE
HHHHHHHHHHHHHCCCCCHHCCC
>Mature Secondary Structure
MRMMSRICTRLPAAAMATLIAACASSAEPAAPVWTVFADGPAQSVQDRFGEAPLAYSVAW
CCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEH
SELKLDPEQGETSATISGTAYLVACDCDRTERPVMFLFNGGPGASSSPLHFSMGPKARGK
HHEEECCCCCCCCEEECCEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCC
EGEFPDNPYTVLRAADLVFIDPVDTGFSRTHSEDGKARYLGVEGDVDAVNRYIRAWLDGN
CCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCC
GRRAAPVLLAGQSYGGTRLSNLVAEVDDLDVRGLVMVSPALDSGAGQTDLGHVFALPTMA
CCEECEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEHHHHH
ATAWRFGRSGIEAESEAEAWDIAREYAETGYLLALQQGDLIAPEEKAAVAADIASMTGLS
HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCC
AGDVLGADLRVDIQFFLENVLSTDGLLVSRLNTGVTSPLPSPDVNSHRPAAANDPSLGLG
CCCEECCCCEEHHHHHHHHHHCCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RSNIILSSEIAKYLSEVTGVQRGEAYRSLNLDANFAWDWRSSAKSPNFYVSAAPVLSQFM
CCCEEEHHHHHHHHHHHHCCCCCCHHEEECCCCCEEECHHCCCCCCCEEEEHHHHHHHHH
QEKERVRLLVFAGYRDLATTLLGTRYALTHNDLPQDRVTLAALPGGHSPYDEETLKAGMA
HHHHHEEEEEEECCHHHHHHHHHCEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHCCHH
DQLFAFIQSAAMTASSNAQESAE
HHHHHHHHHHHHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA