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The map label for this gene is ynaI [C]

Identifier: 114797476

GI number: 114797476

Start: 1408518

End: 1409804

Strand: Reverse

Name: ynaI [C]

Synonym: HNE_1377

Alternate gene names: 114797476

Gene position: 1409804-1408518 (Counterclockwise)

Preceding gene: 114798241

Following gene: 114800381

Centisome position: 38.05

GC content: 61.62

Gene sequence:

>1287_bases
ATGGCGGCGCCTCCCGTGATGAGTGAACTTGAAACCTGGTGGGAGCGCAACGCGCCCCGCTGGGCCAGTGATGCGACCGA
CTATATCGGCAGCATCTGGAACGAGGGCGCTTACGGGCTGACCTTCGGGCAGATCATCATGGTTGTCCTCATCATGGGCG
TCGCGATCCTCATACGTGGCCTCTTCGCGCGCACGCTGGTCGTCTGGGTCACCCGCTGGGCGGCCGGCTCCACCACACAG
ATTGATGACGCGCTGGTCAAGGCCATCGCCACACCGCTCAAGATCATTCCGGTCGTCGCGGGCATTTATGCCTCCATCCA
GGTTCTGGATGTCGATCCGGCCGTGGAGCTTTATGCCAGCCGCATTATCCAGTCAGTCGTTACACTGACGATCTTCTGGT
CGCTCTCGCGCGCCACGCGGATGCTGGAATATGTGATGTCGGATGTGAAGCGTTCCCTCTCCGGCCCGGCTGTGGACTGG
ATGATCAAGGCGCTGCAATTCATCCTGGTCGCGCTTGGCCTTGGCGCGGTGGCCCAGCAATGGGGCATCGCGGTTGCGCC
GCTGCTAGCCGGTCTTGGCGTCTTCGGCATCGCGGTCGGTCTCGGCGCGCAGGATCTCTTCCGCAACCTGATCTCCGGCC
TGCTGATCATCGGGGAAAAGCGTTTCGTGCCGGGCGAATGGATTCTTGTGGACGATGTGGTCGAAGGCACTGTCGTGCGG
ATCAACTTTCGCTCCACCCTCGTGCGCCGCTTCGATCAGAGCCCGGTCTATGTGCCCAACTCCAAACTCGCCGACGCCGC
CGTCACCAACTTCACGCGCATGACCCACCGCCGGATCAAATGGGCCGTTGGCGTGGAATACTCGACCACGGTGGAACAGC
TCAAAGCCATCCGCCAGGAAATCGAAGACTGGCTGATGCAGGACGACCGCATCGCCAAGCCGCCGGAAGTCGCCCTCTTC
GTGCGCGTCGATGCGTTCAATGCCAGCTCCATCGACCTCCTCATCTACACCTTCACCAAGACCACCAACTGGGGCGAATG
GCTGAAGATCAAGGAGGAGTTCGCCTACATCGTCATGGACATCATCGAGCGCAACGGGGCAGCTTTCGCCTTCCCGAGCC
AGACGATCTACATGGATCAGTCCGACCCGCCGGAGATCATGGCGCCACCCGACGACAAGGCGCCGGTCAAACGCGTCCCC
GGCCCGGACAATCGGAAAGTCGGCGCGCAGGGCTCCACGAGCGACGAAGCTTCTTCAGACTCAGAACGTGGAGAAGGCGA
GGAATAA

Upstream 100 bases:

>100_bases
CCCGAAAAATTCAAAAATTTACAGCCTCGCCGGTTAACATCGCGGCCCACCCGGCCTAGGTGCCACCTCAGGCAACTGAA
ACCAGACAAGGGGACTGATG

Downstream 100 bases:

>100_bases
CTTTGTCCCCTCCCGGACGAAATAAAGCGGGGCGCCCCACAGGAGCGCCCCGTTTCATTTGAGGCCGTCTTTTTACCGGG
TTTCAGTTATGCCCAACGGA

Product: small conductance mechanosensitive ion channel (MscS) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MAAPPVMSELETWWERNAPRWASDATDYIGSIWNEGAYGLTFGQIIMVVLIMGVAILIRGLFARTLVVWVTRWAAGSTTQ
IDDALVKAIATPLKIIPVVAGIYASIQVLDVDPAVELYASRIIQSVVTLTIFWSLSRATRMLEYVMSDVKRSLSGPAVDW
MIKALQFILVALGLGAVAQQWGIAVAPLLAGLGVFGIAVGLGAQDLFRNLISGLLIIGEKRFVPGEWILVDDVVEGTVVR
INFRSTLVRRFDQSPVYVPNSKLADAAVTNFTRMTHRRIKWAVGVEYSTTVEQLKAIRQEIEDWLMQDDRIAKPPEVALF
VRVDAFNASSIDLLIYTFTKTTNWGEWLKIKEEFAYIVMDIIERNGAAFAFPSQTIYMDQSDPPEIMAPPDDKAPVKRVP
GPDNRKVGAQGSTSDEASSDSERGEGEE

Sequences:

>Translated_428_residues
MAAPPVMSELETWWERNAPRWASDATDYIGSIWNEGAYGLTFGQIIMVVLIMGVAILIRGLFARTLVVWVTRWAAGSTTQ
IDDALVKAIATPLKIIPVVAGIYASIQVLDVDPAVELYASRIIQSVVTLTIFWSLSRATRMLEYVMSDVKRSLSGPAVDW
MIKALQFILVALGLGAVAQQWGIAVAPLLAGLGVFGIAVGLGAQDLFRNLISGLLIIGEKRFVPGEWILVDDVVEGTVVR
INFRSTLVRRFDQSPVYVPNSKLADAAVTNFTRMTHRRIKWAVGVEYSTTVEQLKAIRQEIEDWLMQDDRIAKPPEVALF
VRVDAFNASSIDLLIYTFTKTTNWGEWLKIKEEFAYIVMDIIERNGAAFAFPSQTIYMDQSDPPEIMAPPDDKAPVKRVP
GPDNRKVGAQGSTSDEASSDSERGEGEE
>Mature_427_residues
AAPPVMSELETWWERNAPRWASDATDYIGSIWNEGAYGLTFGQIIMVVLIMGVAILIRGLFARTLVVWVTRWAAGSTTQI
DDALVKAIATPLKIIPVVAGIYASIQVLDVDPAVELYASRIIQSVVTLTIFWSLSRATRMLEYVMSDVKRSLSGPAVDWM
IKALQFILVALGLGAVAQQWGIAVAPLLAGLGVFGIAVGLGAQDLFRNLISGLLIIGEKRFVPGEWILVDDVVEGTVVRI
NFRSTLVRRFDQSPVYVPNSKLADAAVTNFTRMTHRRIKWAVGVEYSTTVEQLKAIRQEIEDWLMQDDRIAKPPEVALFV
RVDAFNASSIDLLIYTFTKTTNWGEWLKIKEEFAYIVMDIIERNGAAFAFPSQTIYMDQSDPPEIMAPPDDKAPVKRVPG
PDNRKVGAQGSTSDEASSDSERGEGEE

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=275, Percent_Identity=30.1818181818182, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI1789291, Length=275, Percent_Identity=28, Blast_Score=95, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 47298; Mature: 47167

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS01246 UPF0003

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPPVMSELETWWERNAPRWASDATDYIGSIWNEGAYGLTFGQIIMVVLIMGVAILIRG
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LFARTLVVWVTRWAAGSTTQIDDALVKAIATPLKIIPVVAGIYASIQVLDVDPAVELYAS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHH
RIIQSVVTLTIFWSLSRATRMLEYVMSDVKRSLSGPAVDWMIKALQFILVALGLGAVAQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
WGIAVAPLLAGLGVFGIAVGLGAQDLFRNLISGLLIIGEKRFVPGEWILVDDVVEGTVVR
HCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCEEEE
INFRSTLVRRFDQSPVYVPNSKLADAAVTNFTRMTHRRIKWAVGVEYSTTVEQLKAIRQE
EEHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHH
IEDWLMQDDRIAKPPEVALFVRVDAFNASSIDLLIYTFTKTTNWGEWLKIKEEFAYIVMD
HHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHH
IIERNGAAFAFPSQTIYMDQSDPPEIMAPPDDKAPVKRVPGPDNRKVGAQGSTSDEASSD
HHHCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SERGEGEE
CCCCCCCC
>Mature Secondary Structure 
AAPPVMSELETWWERNAPRWASDATDYIGSIWNEGAYGLTFGQIIMVVLIMGVAILIRG
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LFARTLVVWVTRWAAGSTTQIDDALVKAIATPLKIIPVVAGIYASIQVLDVDPAVELYAS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHH
RIIQSVVTLTIFWSLSRATRMLEYVMSDVKRSLSGPAVDWMIKALQFILVALGLGAVAQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
WGIAVAPLLAGLGVFGIAVGLGAQDLFRNLISGLLIIGEKRFVPGEWILVDDVVEGTVVR
HCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCEEEE
INFRSTLVRRFDQSPVYVPNSKLADAAVTNFTRMTHRRIKWAVGVEYSTTVEQLKAIRQE
EEHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHH
IEDWLMQDDRIAKPPEVALFVRVDAFNASSIDLLIYTFTKTTNWGEWLKIKEEFAYIVMD
HHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHH
IIERNGAAFAFPSQTIYMDQSDPPEIMAPPDDKAPVKRVPGPDNRKVGAQGSTSDEASSD
HHHCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SERGEGEE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]