Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797417

Identifier: 114797417

GI number: 114797417

Start: 3128407

End: 3130335

Strand: Direct

Name: 114797417

Synonym: HNE_2972

Alternate gene names: NA

Gene position: 3128407-3130335 (Clockwise)

Preceding gene: 114798137

Following gene: 114800460

Centisome position: 84.44

GC content: 61.59

Gene sequence:

>1929_bases
ATGTCAGAGATGGCGGGCATGCATCAGGGCTTTGAGGAGTGTGAGGACAAGTCGGTCTATTTCACCCTGTCGCTCTATAT
CAGCCAGAAGAATGTGACCGCCGCGCTTGGCCGGGATCTGGACCCGGAAACCGTGCGCGCCTTCCAGCCCGGCTATCGCG
GCAGCAAACGCCTGCGCGACGCGGTGGAGCCGCTGTTCAACGACATTGCCGACCGCGAACGCCTGGGCGCGGTGGATGAT
TTCCTGCTCGATACGCTCTGCCCGCAAAATGGCGAATTCATAGAGGTGACCGCGCCCAGCGAGATTGCCTGGTCGACCGA
AGGGCGCCGCTTCATCGCCACCCCGCCTGGCCTTGGCAAGACGCGCACCCTCCGGGTACGGCGGTTCTGGTATACCCATG
CCAATGGCGCGGTGGGCTATCACCTCTCCTTCCGATACAATTACGACCATACGCCGGGTGAATTCTATTTCCTGTCCCTG
TTGCAGAAGGCCGCCGCGCCGAAGGAATTCGAAGCCAATCCGCGCCCTCCTGGCAGCGCGCCCTGGAGCGCCACCGATGA
CCGGACCGGGATCGCGCCGCTGGATCTTCTGCGCGTAAAAAGCCCGCACGGGAGCGACCAGAGTTTCTGGCAATATGTGC
GCGGCGCGTTTGATCTCGACGCCGAAGACCTGTTTGGCAAACTCCCCCAGGGCGCAGCCAGGCGTGGGACGACACGCCTG
GCGCCCACCTTCGATACGCTGGTCGCAGAAGCACCCTTCATTGAAGTGCCGGGCCTCGTGATGCCGGTTTCGCGGCTTCT
GTTCTTCTTTGAAGATGCCACTTTCTTCCGCCGCCTGTTGCCTGAGCCCGACCCGGAAACGGGCGTGCCCCCGCCCCGAA
CGCTGATGGTGCAGGAGGGATGCTACCTGCCCTATCAACAGAAGCTCGCCGGGCTGAACCCTCAGGGGCTGGTGGATGTG
CCCGAGGTGCGGATGGGCGCAGACTATTGGCACTGGGTGATCCACCGGCCCGATTATGACCAGTTCACCGACGCCCAGAT
CGAGGAAGGCCGCAAGACACGCCCCGCCATGGACGACCGGCGCCGGCAGGACTGTCTGCAATACCTGTTCATGGCCGGCT
TCAACCAGAACATCATCGACTTCATGAACCAGGACCCCTCCGAAATCCTGGACTCAACCGATCCGATCTATCCGGCGACC
GAGGAGCAGGCGACGGAGCGGAAGTTCGTGCGCTTTGCCAACCCGCGGGCGCTGACCACCTATGTGGAAAAGGCGCGCAG
CCTGGAGGCGGCCAACGACTATATCGGCACCTGCCCCTACGCGTTCATGATCCATGTCGTCTCGATGCATAACGAGTTCA
TGACGCGAGAATATGAGGCGACGGCCTTCGAACTGATCGATGAGGTTGAGCGCCTTGGCAACAAGGGCCGGCTGAAACGC
GCGGCCGAAGCGTTCTACGCTTTCCGCACCGGCGATTATGCCGGCTATTACCGCGACCGGTATATGAACGTCTTCCGCTA
TGACACCGAGGCCGAAGTGTTCGAGAAGATGACCCAGCTGCGCGGTATCGGCAGGCGCAACGATTATATCGAGCGGCTGA
TCTCCAACATGGAAAGCCAGACCCGCGACCGGGAAGCGCGCCTCGCCAAGAAGGACGAGACCTCGATGAGCCTCCTGCTG
GGCGCGCTGGGCGTGTTCGGCTTCTTCCAGCTGGCGATGATGTGGGCCGACAAGCTGCGCGATCTCAGCCGGAATGACGG
TGTGTCGGTGAGCCTTGGCTGGATGCCCCCGTTTCTGGACCTGTCAGGCGGGAATCTCGATCAACCCTGGAATGGATTCT
CGGTTTTTGTGCTTTACGCCTCAATGGGCTTCACGATCGCGCTGATTATTTTTCTGATCTGGCGCCTGGCGCGTGGCTTC
TTCCGGTAA

Upstream 100 bases:

>100_bases
ACGCCATCTTCGCGGAAGCTGAACAGGTGCAACGGGACCGAAGCTAGCCGGCGGGGGGCCGGCACCAAACATGGCGGGAA
ACACGGCAAGAGACACCGGG

Downstream 100 bases:

>100_bases
AGTGTGTTTTGTAAATTCTGTAAACTTTGAAATCGGCCGTCAGAACGCTGAAAACCCACCGGAAAAAGCCAGAAAAAGAA
AGCCCGGCAGCATCAAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 642; Mature: 641

Protein sequence:

>642_residues
MSEMAGMHQGFEECEDKSVYFTLSLYISQKNVTAALGRDLDPETVRAFQPGYRGSKRLRDAVEPLFNDIADRERLGAVDD
FLLDTLCPQNGEFIEVTAPSEIAWSTEGRRFIATPPGLGKTRTLRVRRFWYTHANGAVGYHLSFRYNYDHTPGEFYFLSL
LQKAAAPKEFEANPRPPGSAPWSATDDRTGIAPLDLLRVKSPHGSDQSFWQYVRGAFDLDAEDLFGKLPQGAARRGTTRL
APTFDTLVAEAPFIEVPGLVMPVSRLLFFFEDATFFRRLLPEPDPETGVPPPRTLMVQEGCYLPYQQKLAGLNPQGLVDV
PEVRMGADYWHWVIHRPDYDQFTDAQIEEGRKTRPAMDDRRRQDCLQYLFMAGFNQNIIDFMNQDPSEILDSTDPIYPAT
EEQATERKFVRFANPRALTTYVEKARSLEAANDYIGTCPYAFMIHVVSMHNEFMTREYEATAFELIDEVERLGNKGRLKR
AAEAFYAFRTGDYAGYYRDRYMNVFRYDTEAEVFEKMTQLRGIGRRNDYIERLISNMESQTRDREARLAKKDETSMSLLL
GALGVFGFFQLAMMWADKLRDLSRNDGVSVSLGWMPPFLDLSGGNLDQPWNGFSVFVLYASMGFTIALIIFLIWRLARGF
FR

Sequences:

>Translated_642_residues
MSEMAGMHQGFEECEDKSVYFTLSLYISQKNVTAALGRDLDPETVRAFQPGYRGSKRLRDAVEPLFNDIADRERLGAVDD
FLLDTLCPQNGEFIEVTAPSEIAWSTEGRRFIATPPGLGKTRTLRVRRFWYTHANGAVGYHLSFRYNYDHTPGEFYFLSL
LQKAAAPKEFEANPRPPGSAPWSATDDRTGIAPLDLLRVKSPHGSDQSFWQYVRGAFDLDAEDLFGKLPQGAARRGTTRL
APTFDTLVAEAPFIEVPGLVMPVSRLLFFFEDATFFRRLLPEPDPETGVPPPRTLMVQEGCYLPYQQKLAGLNPQGLVDV
PEVRMGADYWHWVIHRPDYDQFTDAQIEEGRKTRPAMDDRRRQDCLQYLFMAGFNQNIIDFMNQDPSEILDSTDPIYPAT
EEQATERKFVRFANPRALTTYVEKARSLEAANDYIGTCPYAFMIHVVSMHNEFMTREYEATAFELIDEVERLGNKGRLKR
AAEAFYAFRTGDYAGYYRDRYMNVFRYDTEAEVFEKMTQLRGIGRRNDYIERLISNMESQTRDREARLAKKDETSMSLLL
GALGVFGFFQLAMMWADKLRDLSRNDGVSVSLGWMPPFLDLSGGNLDQPWNGFSVFVLYASMGFTIALIIFLIWRLARGF
FR
>Mature_641_residues
SEMAGMHQGFEECEDKSVYFTLSLYISQKNVTAALGRDLDPETVRAFQPGYRGSKRLRDAVEPLFNDIADRERLGAVDDF
LLDTLCPQNGEFIEVTAPSEIAWSTEGRRFIATPPGLGKTRTLRVRRFWYTHANGAVGYHLSFRYNYDHTPGEFYFLSLL
QKAAAPKEFEANPRPPGSAPWSATDDRTGIAPLDLLRVKSPHGSDQSFWQYVRGAFDLDAEDLFGKLPQGAARRGTTRLA
PTFDTLVAEAPFIEVPGLVMPVSRLLFFFEDATFFRRLLPEPDPETGVPPPRTLMVQEGCYLPYQQKLAGLNPQGLVDVP
EVRMGADYWHWVIHRPDYDQFTDAQIEEGRKTRPAMDDRRRQDCLQYLFMAGFNQNIIDFMNQDPSEILDSTDPIYPATE
EQATERKFVRFANPRALTTYVEKARSLEAANDYIGTCPYAFMIHVVSMHNEFMTREYEATAFELIDEVERLGNKGRLKRA
AEAFYAFRTGDYAGYYRDRYMNVFRYDTEAEVFEKMTQLRGIGRRNDYIERLISNMESQTRDREARLAKKDETSMSLLLG
ALGVFGFFQLAMMWADKLRDLSRNDGVSVSLGWMPPFLDLSGGNLDQPWNGFSVFVLYASMGFTIALIIFLIWRLARGFF
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73491; Mature: 73360

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEMAGMHQGFEECEDKSVYFTLSLYISQKNVTAALGRDLDPETVRAFQPGYRGSKRLRD
CCCHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHCCCCCHHHHHHHCCCCCCHHHHHH
AVEPLFNDIADRERLGAVDDFLLDTLCPQNGEFIEVTAPSEIAWSTEGRRFIATPPGLGK
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCEEECCCCCEEEECCCCCCC
TRTLRVRRFWYTHANGAVGYHLSFRYNYDHTPGEFYFLSLLQKAAAPKEFEANPRPPGSA
CEEEEEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PWSATDDRTGIAPLDLLRVKSPHGSDQSFWQYVRGAFDLDAEDLFGKLPQGAARRGTTRL
CCCCCCCCCCCCHHHHHEECCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCHHHCCCCCC
APTFDTLVAEAPFIEVPGLVMPVSRLLFFFEDATFFRRLLPEPDPETGVPPPRTLMVQEG
CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC
CYLPYQQKLAGLNPQGLVDVPEVRMGADYWHWVIHRPDYDQFTDAQIEEGRKTRPAMDDR
CCCCHHHHHCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCHHHH
RRQDCLQYLFMAGFNQNIIDFMNQDPSEILDSTDPIYPATEEQATERKFVRFANPRALTT
HHHHHHHHHHHHCCCCHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH
YVEKARSLEAANDYIGTCPYAFMIHVVSMHNEFMTREYEATAFELIDEVERLGNKGRLKR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AAEAFYAFRTGDYAGYYRDRYMNVFRYDTEAEVFEKMTQLRGIGRRNDYIERLISNMESQ
HHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
TRDREARLAKKDETSMSLLLGALGVFGFFQLAMMWADKLRDLSRNDGVSVSLGWMPPFLD
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEE
LSGGNLDQPWNGFSVFVLYASMGFTIALIIFLIWRLARGFFR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEMAGMHQGFEECEDKSVYFTLSLYISQKNVTAALGRDLDPETVRAFQPGYRGSKRLRD
CCHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHCCCCCHHHHHHHCCCCCCHHHHHH
AVEPLFNDIADRERLGAVDDFLLDTLCPQNGEFIEVTAPSEIAWSTEGRRFIATPPGLGK
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCEEECCCCCEEEECCCCCCC
TRTLRVRRFWYTHANGAVGYHLSFRYNYDHTPGEFYFLSLLQKAAAPKEFEANPRPPGSA
CEEEEEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PWSATDDRTGIAPLDLLRVKSPHGSDQSFWQYVRGAFDLDAEDLFGKLPQGAARRGTTRL
CCCCCCCCCCCCHHHHHEECCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCHHHCCCCCC
APTFDTLVAEAPFIEVPGLVMPVSRLLFFFEDATFFRRLLPEPDPETGVPPPRTLMVQEG
CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC
CYLPYQQKLAGLNPQGLVDVPEVRMGADYWHWVIHRPDYDQFTDAQIEEGRKTRPAMDDR
CCCCHHHHHCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCHHHH
RRQDCLQYLFMAGFNQNIIDFMNQDPSEILDSTDPIYPATEEQATERKFVRFANPRALTT
HHHHHHHHHHHHCCCCHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH
YVEKARSLEAANDYIGTCPYAFMIHVVSMHNEFMTREYEATAFELIDEVERLGNKGRLKR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AAEAFYAFRTGDYAGYYRDRYMNVFRYDTEAEVFEKMTQLRGIGRRNDYIERLISNMESQ
HHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
TRDREARLAKKDETSMSLLLGALGVFGFFQLAMMWADKLRDLSRNDGVSVSLGWMPPFLD
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEE
LSGGNLDQPWNGFSVFVLYASMGFTIALIIFLIWRLARGFFR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA